miRNEST 2.0, an integrative microRNA resource :: BLAST
>54388_rco-miR168:pmrd
Length = 156
Score = 75.8 bits (38), Expect = 1e-14
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 1 accggcggtctctaattcgcttggtgcaggtcgggaac 38
||||||||||||||||||||||||||||||||||||||
Sbjct: 3 accggcggtctctaattcgcttggtgcaggtcgggaac 40
Score = 69.9 bits (35), Expect = 8e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 178 gaattggatcccgccttgcatcaactgaatcgaaaaccg 216
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 110 gaattggatcccgccttgcatcaactgaatcgaagaccg 148
>48560_gma-miR168:pmrd
Length = 125
Score = 71.9 bits (36), Expect = 2e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 5 gcggtctctaattcgcttggtgcaggtcgggaaccg 40
||||||||||||||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaaccg 42
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 177 cgaattggatcccgccttgcatcaactgaatcg 209
|||||||||||||||||||||||||||||||||
Sbjct: 78 cgaattggatcccgccttgcatcaactgaatcg 110
>54802_vvi-miR168:pmrd
Length = 132
Score = 67.9 bits (34), Expect = 3e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 7 ggtctctaattcgcttggtgcaggtcgggaaccg 40
||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaaccg 34
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 184 gatcccgccttgcatcaactgaatcg 209
||||||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactgaatcg 124
>51650_ptc-miR168a:pmrd
Length = 160
Score = 67.9 bits (34), Expect = 3e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 176 gcgaattggatcccgccttgcatcaactgaatcg 209
||||||||||||||||||||||||||||||||||
Sbjct: 123 gcgaattggatcccgccttgcatcaactgaatcg 156
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 7 ggtctctaattcgcttggtgcaggtcgggaac 38
||||||| ||||||||||||||||||||||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaac 32
>51651_ptc-miR168b:pmrd
Length = 136
Score = 63.9 bits (32), Expect = 5e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 7 ggtctctaattcgcttggtgcaggtcgggaac 38
||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
Score = 63.9 bits (32), Expect = 5e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 178 gaattggatcccgccttgcatcaactgaatcg 209
||||||||||||||||||||||||||||||||
Sbjct: 101 gaattggatcccgccttgcatcaactgaatcg 132
>54375_pts-miR168b:pmrd
Length = 140
Score = 60.0 bits (30), Expect = 7e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 176 gcgaattggatcccgccttgcatcaactga 205
||||||||||||||||||||||||||||||
Sbjct: 111 gcgaattggatcccgccttgcatcaactga 140
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 tcgcttggtgcaggtcgggaac 38
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 60.0 bits (30), Expect = 7e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 180 attggatcccgccttgcatcaactgaatcg 209
||||||||||||||||||||||||||||||
Sbjct: 91 attggatcccgccttgcatcaactgaatcg 120
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 attcgcttggtgcaggtcgggaacc 39
|||||||||||||||||||||||||
Sbjct: 11 attcgcttggtgcaggtcgggaacc 35
>46958_ath-miR168b:pmrd
Length = 124
Score = 60.0 bits (30), Expect = 7e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1 accggcggtctctaattcgcttggtgcaggtcgggaac 38
|||||||||||| ||||||||||||||||||||||||
Sbjct: 3 accggcggtctcggattcgcttggtgcaggtcgggaac 40
>46957_ath-miR168a:pmrd
Length = 138
Score = 60.0 bits (30), Expect = 7e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 180 attggatcccgccttgcatcaactgaatcg 209
||||||||||||||||||||||||||||||
Sbjct: 96 attggatcccgccttgcatcaactgaatcg 125
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 attcgcttggtgcaggtcgggaacc 39
|||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaacc 40
>54374_pts-miR168a:pmrd
Length = 118
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 178 gaattggatcccgccttgcatcaactga 205
||||||||||||||||||||||||||||
Sbjct: 91 gaattggatcccgccttgcatcaactga 118
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 tcgcttggtgcaggtcgggaac 38
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>54366_ptr-miR168:pmrd
Length = 118
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 178 gaattggatcccgccttgcatcaactga 205
||||||||||||||||||||||||||||
Sbjct: 91 gaattggatcccgccttgcatcaactga 118
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 tcgcttggtgcaggtcgggaac 38
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>46959_ath-miR168m:pmrd
Length = 104
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 180 attggatcccgccttgcatcaactga 205
||||||||||||||||||||||||||
Sbjct: 79 attggatcccgccttgcatcaactga 104
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 tcgcttggtgcaggtcgggaacc 39
|||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaacc 23
>48649_hte-miR168:pmrd
Length = 140
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 17 tcgcttggtgcaggtcgggaaccgcttc 44
|||||||||||||||||||||| |||||
Sbjct: 1 tcgcttggtgcaggtcgggaactgcttc 28
>48349_bna-miR168:pmrd
Length = 133
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 3 cggcggtctctaattcgcttggtgcaggtcgggaac 38
|||||| |||| | ||||||||||||||||||||||
Sbjct: 4 cggcggcctctgactcgcttggtgcaggtcgggaac 39
>55000_zma-miR168b:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 183 ggatcccgccttgcatcaactgaatcg 209
||||||||||||||||||| |||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatcg 89
>54665_stu-miR168:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 181 ttggatcccgccttgcatcaactga 205
|||| ||||||||||||||||||||
Sbjct: 109 ttgggtcccgccttgcatcaactga 133
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 tcgcttggtgcaggtcggga 36
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>54546_sly-miR168:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 tcgcttggtgcaggtcggga 36
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
