miRNEST 2.0, an integrative microRNA resource :: BLAST
>48606_gma-miR1520c:pmrd
Length = 140
Score = 75.8 bits (38), Expect = 7e-15
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 74 gacatccaatcagaacatgacacgtgacagtcatcatttaataagaacgtgaca 127
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Sbjct: 72 gacatccaatcagaacatgacacatgacaaacatcattcaataagaacgtgaca 125
Score = 56.0 bits (28), Expect = 7e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 1 cgtgtcacgttcttattgaatgatgactattacgtgtcatgttctgat 48
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Sbjct: 127 cgtgtcacgttcttattgaatgatgtttgtcatgtgtcatgttctgat 80
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 80 caatcagaacatgacacgtgacagtcatcat 110
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Sbjct: 31 caatcagaatatgacacgtgacagtcatcat 1
>48607_gma-miR1520d:pmrd
Length = 111
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 75 acatccaatcagaacatgacacgtgacagtcatcat 110
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Sbjct: 36 acatccaatcagaacatgacatgtgatagtcatcat 1
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 32 acgtgtcatgttctgatcgaccaatgacaacaacaat 68
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Sbjct: 96 acgtgtcatgttctgattgatcaatgaaaacaacaat 60
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 80 caatcagaacatgacacgtgaca 102
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Sbjct: 78 caatcagaacatgacacgtgaca 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 20 atgatgactattacgtgtcatgttctgat 48
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Sbjct: 1 atgatgactatcacatgtcatgttctgat 29
>48604_gma-miR1520a:pmrd
Length = 150
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 74 gacatccaatcagaacatgacacgtgacagtcatcat 110
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Sbjct: 108 gacatccaattagaacatgatacatgacagtcatcat 144
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/47 (89%), Gaps = 2/47 (4%)
Strand = Plus / Plus
Query: 2 gtgtcacgttcttattgaatgatgactattacgtgtcatgttctgat 48
|||||| |||||||||| ||||||||| || |||||||||||||||
Sbjct: 21 gtgtcatgttcttattggatgatgactgtt--gtgtcatgttctgat 65
Score = 44.1 bits (22), Expect = 2e-05
Identities = 43/49 (87%), Gaps = 2/49 (4%)
Strand = Plus / Minus
Query: 79 ccaatcagaacatgacacgtgacagtcatcatttaataagaacgtgaca 127
|||||||||||||||||| ||||||||||| ||||||||| |||||
Sbjct: 68 ccaatcagaacatgacac--aacagtcatcatccaataagaacatgaca 22
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 76 catccaatcagaacatgacacgtgacagtcatcatt 111
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Sbjct: 41 catccaataagaacatgacacatgacggtcaacatt 6
