miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48641_han-miR156:pmrd
Length = 362
Score = 718 bits (362), Expect = 0.0
Identities = 362/362 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacggtatgcttttgcgttggaacatgcatacgaaagtaacta 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacggtatgcttttgcgttggaacatgcatacgaaagtaacta 60
Query: 62 atcatacgataaattatcaaaactactgtcgatagagtaattaggaaaacaaaccttgat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcatacgataaattatcaaaactactgtcgatagagtaattaggaaaacaaaccttgat 120
Query: 122 gaaaaacaccggctgtgtgctgggaattgcgtgtggtttcccaaatagagttcaaagcag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaaaacaccggctgtgtgctgggaattgcgtgtggtttcccaaatagagttcaaagcag 180
Query: 182 gttcgggttgaaccagttcaggaacattgttagacacaaaacttatttgatgttgcccat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttcgggttgaaccagttcaggaacattgttagacacaaaacttatttgatgttgcccat 240
Query: 242 cataaaatgatgaagactgacttcttgagttaaagtggacagtttctttttctttttgtg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cataaaatgatgaagactgacttcttgagttaaagtggacagtttctttttctttttgtg 300
Query: 302 gctttcggcgacgggcattgtggtcagaaagcctctggcgacagctccgcttcttcccat 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctttcggcgacgggcattgtggtcagaaagcctctggcgacagctccgcttcttcccat 360
Query: 362 ca 363
||
Sbjct: 361 ca 362
>46923_ath-miR156s:pmrd
Length = 218
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacggt 24
|||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacggt 23
>46922_ath-miR156r:pmrd
Length = 326
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacggt 24
|||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacggt 23
>54909_zel-miR157:pmrd
Length = 69
Score = 44.1 bits (22), Expect = 8e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacg 22
||||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcacg 22
>54662_stu-miR157b:pmrd
Length = 617
Score = 44.1 bits (22), Expect = 8e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacg 22
||||||||||||||||||||||
Sbjct: 531 ttgacagaagagagagagcacg 552
>51321_par-miR157:pmrd
Length = 116
Score = 44.1 bits (22), Expect = 8e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacg 22
||||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcacg 22
>51319_pam-miR157:pmrd
Length = 216
Score = 44.1 bits (22), Expect = 8e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacg 22
||||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcacg 22
>48632_gra-miR157c:pmrd
Length = 183
Score = 44.1 bits (22), Expect = 8e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacg 22
||||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcacg 22
>48418_can-miR157:pmrd
Length = 155
Score = 44.1 bits (22), Expect = 8e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacg 22
||||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcacg 22
>54928_zma-miR157m:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 169 ttgacagaagagagagagcac 189
>54926_zma-miR156q:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 169 ttgacagaagagagagagcac 189
>54925_zma-miR156p:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 169 ttgacagaagagagagagcac 189
>54908_zel-miR156:pmrd
Length = 67
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacg 22
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>54672_tae-miR156b:pmrd
Length = 416
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacg 22
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>54671_tae-miR156a:pmrd
Length = 52
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacg 22
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>54663_stu-miR157c:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>54660_stu-miR156e:pmrd
Length = 72
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacg 22
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>54659_stu-miR156d:pmrd
Length = 171
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacg 22
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>54658_stu-miR156c:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacg 22
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>54627_sof-miR156u:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 62 ttgacagaagagagagagcac 82
>54623_sof-miR156e:pmrd
Length = 70
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacg 22
|||||||||||||||||||||
Sbjct: 50 tgacagaagagagagagcacg 70
>54531_sin-miR157:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>54372_pts-miR157:pmrd
Length = 356
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 336 ttgacagaagagagagagcac 356
>54370_pts-miR156b:pmrd
Length = 356
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 336 ttgacagaagagagagagcac 356
>54365_ptr-miR156:pmrd
Length = 373
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 353 ttgacagaagagagagagcac 373
>51320_par-miR156:pmrd
Length = 114
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacg 22
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>48818_osa-miR156r:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacg 22
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>48787_nbe-miR157b:pmrd
Length = 207
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>48786_nbe-miR157a:pmrd
Length = 169
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 149 ttgacagaagagagagagcac 169
>48785_nbe-miR156b:pmrd
Length = 169
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 149 ttgacagaagagagagagcac 169
>48688_mdo-miR156a:pmrd
Length = 109
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 89 ttgacagaagagagagagcac 109
>48684_lsa-miR157:pmrd
Length = 357
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>48676_lja-miR157b:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>48653_hvv-miR156b:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 66 ttgacagaagagagagagcac 86
>48633_gra-miR157d:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 69 ttgacagaagagagagagcac 89
>48538_gma-miR157r:pmrd
Length = 147
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 127 ttgacagaagagagagagcac 147
>48529_gma-miR156b:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 20 ttgacagaagagagagagcac 40
>48492_ghr-miR157:pmrd
Length = 152
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacg 22
|||||||||||||||||||||
Sbjct: 2 tgacagaagagagagagcacg 22
>48477_eca-miR156:pmrd
Length = 150
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacg 22
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>48471_csi-miR156a:pmrd
Length = 56
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacg 22
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>48426_cpt-miR156b:pmrd
Length = 185
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacg 22
|||||||||||||||||||||
Sbjct: 11 tgacagaagagagagagcacg 31
>48416_can-miR156a:pmrd
Length = 152
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacg 22
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>48305_bdi-miR156:pmrd
Length = 147
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 100 ttgacagaagagagagagcac 120
>46928_ath-miR157m:pmrd
Length = 50
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 30 ttgacagaagagagagagcac 50
>46903_aqc-miR529:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 17 ttgacagaagagagagagcac 37
>46857_ahy-miR157k:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 21 ttgacagaagagagagagcac 41
