miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48684_lsa-miR157:pmrd
Length = 357
Score = 704 bits (355), Expect = 0.0
Identities = 355/355 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacagttggagtcctcacggactccattaaaacaccctcctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgacagaagagagagagcacagttggagtcctcacggactccattaaaacaccctcctgg 61
Query: 61 tggaacataaggaggtggattatccaggttgctttgccatggaagcggtgggaacttttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tggaacataaggaggtggattatccaggttgctttgccatggaagcggtgggaacttttc 121
Query: 121 tccggcaattgggaggtcgatggcggctcgaggcggtggtgccgcccttgttcctggcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tccggcaattgggaggtcgatggcggctcgaggcggtggtgccgcccttgttcctggcca 181
Query: 181 ctgaatccttcctcttgagcatgacgaaaagtccattagaaagcctccagaattcccatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ctgaatccttcctcttgagcatgacgaaaagtccattagaaagcctccagaattcccatt 241
Query: 241 gttttcaaagattgaggaggagacagttccatagcgagtggatagcagagatggctttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gttttcaaagattgaggaggagacagttccatagcgagtggatagcagagatggctttct 301
Query: 301 tctacgttcattgtgcccagccaatcgtctcctgcagcttctttttccctggtca 355
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tctacgttcattgtgcccagccaatcgtctcctgcagcttctttttccctggtca 356
>48654_hvv-miR156c:pmrd
Length = 178
Score = 52.0 bits (26), Expect = 3e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacagttggagtc 30
||||||||||||||||||||||| ||||||
Sbjct: 1 tgacagaagagagagagcacagtcggagtc 30
>48650_hvs-miR156:pmrd
Length = 178
Score = 52.0 bits (26), Expect = 3e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacagttggagtc 30
||||||||||||||||||||||| ||||||
Sbjct: 1 tgacagaagagagagagcacagtcggagtc 30
>48305_bdi-miR156:pmrd
Length = 147
Score = 52.0 bits (26), Expect = 3e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacagttggagtc 30
|||||||||||||||||||||| |||||||
Sbjct: 101 tgacagaagagagagagcacagctggagtc 130
>46921_ath-miR156q:pmrd
Length = 59
Score = 52.0 bits (26), Expect = 3e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacagttggagtc 30
|||||||||||||||||||||||| |||||
Sbjct: 1 tgacagaagagagagagcacagtttgagtc 30
>54621_sof-miR156c:pmrd
Length = 68
Score = 46.1 bits (23), Expect = 2e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacagttggagtcc 31
|||||||||||||||||||||| | ||||||
Sbjct: 1 tgacagaagagagagagcacagctagagtcc 31
>48689_mdo-miR156b:pmrd
Length = 79
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacagt 23
|||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacagt 23
>54624_sof-miR156f:pmrd
Length = 46
Score = 44.1 bits (22), Expect = 7e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacagttggagtc 30
||||||||||||||||||||| |||||||
Sbjct: 1 tgacagaagagagagagcacaactggagtc 30
>54531_sin-miR157:pmrd
Length = 83
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacag 22
||||||||||||||||||||||
Sbjct: 2 tgacagaagagagagagcacag 23
>54530_sin-miR156:pmrd
Length = 81
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacag 22
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacag 22
>48655_hvv-miR156d:pmrd
Length = 203
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacag 22
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacag 22
>48533_gma-miR156f:pmrd
Length = 267
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacag 22
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacag 22
>54920_zma-miR156j:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcaca 21
|||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcaca 41
>54652_spr-miR156:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcaca 21
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
>54625_sof-miR156g:pmrd
Length = 403
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcaca 21
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
>54396_sbi-miR156d:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcaca 21
|||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcaca 41
>54371_pts-miR156c:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcaca 21
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
>51357_ppt-miR156c:pmrd
Length = 95
Score = 42.1 bits (21), Expect = 3e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacagttg 25
||||||||||||| |||||||||||
Sbjct: 10 tgacagaagagagtgagcacagttg 34
>48811_osa-miR156k:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcaca 21
|||||||||||||||||||||
Sbjct: 11 tgacagaagagagagagcaca 31
>48676_lja-miR157b:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcaca 21
|||||||||||||||||||||
Sbjct: 2 tgacagaagagagagagcaca 22
>48674_lja-miR156:pmrd
Length = 47
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcaca 21
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
>48536_gma-miR156i:pmrd
Length = 117
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcaca 21
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
>48529_gma-miR156b:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcaca 21
|||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcaca 41
>46920_ath-miR156p:pmrd
Length = 47
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcaca 21
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
>46903_aqc-miR529:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcaca 21
|||||||||||||||||||||
Sbjct: 18 tgacagaagagagagagcaca 38
>46857_ahy-miR157k:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcaca 21
|||||||||||||||||||||
Sbjct: 22 tgacagaagagagagagcaca 42
