miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00742;MIR162_2;ABIM01004242.1/4343-4433 3649:Carica papaya
(papaya)
Length = 91
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgataaacctctgcatccagc 22
||||||||||||||||||||||
Sbjct: 70 tcgataaacctctgcatccagc 91
>RF00742;MIR162_2;EU548677.1/192-105 3702:Arabidopsis thaliana
(thale cress)
Length = 88
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgataaacctctgcatccagc 22
||||||||||||||||||||||
Sbjct: 67 tcgataaacctctgcatccagc 88
>RF00742;MIR162_2;AB006708.1/30672-30582 3702:Arabidopsis thaliana
(thale cress)
Length = 91
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgataaacctctgcatccagc 22
||||||||||||||||||||||
Sbjct: 70 tcgataaacctctgcatccagc 91
>RF00742;MIR162_2;AARH01005287.1/78295-78385 3694:Populus
trichocarpa
Length = 91
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgataaacctctgcatccagc 22
||||||||||||||||||||||
Sbjct: 70 tcgataaacctctgcatccagc 91
>RF00742;MIR162_2;AASG02018381.1/677-582 3988:Ricinus communis
(castor bean)
Length = 96
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgataaacctctgcatccagc 22
||||||||||||||||||||||
Sbjct: 75 tcgataaacctctgcatccagc 96
>RF00742;MIR162_2;AC162031.12/99168-99079 3880:Medicago truncatula
(barrel medic)
Length = 90
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgataaacctctgcatccagc 22
||||||||||||||||||||||
Sbjct: 69 tcgataaacctctgcatccagc 90
>RF00742;MIR162_2;AM451502.1/2540-2627 29760:Vitis vinifera
Length = 88
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgataaacctctgcatccagc 22
||||||||||||||||||||||
Sbjct: 67 tcgataaacctctgcatccagc 88
>RF00742;MIR162_2;BT061256.1/316-448 4577:Zea mays
Length = 133
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgataaacctctgcatccagc 22
||||||||||||||||||||||
Sbjct: 112 tcgataaacctctgcatccagc 133
>RF00742;MIR162_2;ABXC01002838.1/886-1017 4558:Sorghum bicolor
(sorghum)
Length = 132
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgataaacctctgcatccagc 22
||||||||||||||||||||||
Sbjct: 111 tcgataaacctctgcatccagc 132
