miRNEST 2.0, an integrative microRNA resource :: BLAST
>41767_bdi-MIR172a:mirbase
Length = 153
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 113 atgagaatcttgatgatgctgcatcggcaa 142
||||||||||||||||||||||||||||||
Sbjct: 96 atgagaatcttgatgatgctgcatcggcaa 125
>41631_vvi-MIR172a:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 113 atgagaatcttgatgatgctgcatcggcaa 142
||||||||||||||||||||||||||||||
Sbjct: 32 atgagaatcttgatgatgctgcatcggcaa 3
>41398_ptc-MIR172d:mirbase
Length = 182
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 112 tatgagaatcttgatgatgctgcatcggcaaata 145
|||| |||||||||||||||||||||||||||||
Sbjct: 149 tatgggaatcttgatgatgctgcatcggcaaata 182
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 attggcggatgcgtcaccatcaagattcacaa 32
||||||||||||| || |||||||||||||||
Sbjct: 3 attggcggatgcggcatcatcaagattcacaa 34
>39852_aly-MIR172a:mirbase
Length = 149
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 113 atgagaatcttgatgatgctgcatcggcaa 142
||||||||||||||||||||||||||||||
Sbjct: 96 atgagaatcttgatgatgctgcatcggcaa 125
>41632_vvi-MIR172b:mirbase
Length = 118
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 114 tgagaatcttgatgatgctgcatcggcaa 142
|||||||||||||||||||||||||||||
Sbjct: 31 tgagaatcttgatgatgctgcatcggcaa 3
>41400_ptc-MIR172f:mirbase
Length = 161
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 114 tgagaatcttgatgatgctgcatcggcaa 142
|||||||||||||||||||||||||||||
Sbjct: 130 tgagaatcttgatgatgctgcatcggcaa 158
>41399_ptc-MIR172e:mirbase
Length = 133
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 117 gaatcttgatgatgctgcatcggcaaata 145
|||||||||||||||||||||||||||||
Sbjct: 105 gaatcttgatgatgctgcatcggcaaata 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 1 attggcggatgcgtcaccatcaagattcacaaa 33
|||||| |||||| || ||||||||||||||||
Sbjct: 3 attggccgatgcggcagcatcaagattcacaaa 35
>41396_ptc-MIR172b:mirbase
Length = 140
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 114 tgagaatcttgatgatgctgcatcggcaa 142
|||||||||||||||||||||||||||||
Sbjct: 109 tgagaatcttgatgatgctgcatcggcaa 137
>41128_tcc-MIR172e:mirbase
Length = 189
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 114 tgagaatcttgatgatgctgcatcggcaa 142
|||||||||||||||||||||||||||||
Sbjct: 147 tgagaatcttgatgatgctgcatcggcaa 175
>41125_tcc-MIR172b:mirbase
Length = 160
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 113 atgagaatcttgatgatgctgcatcggc 140
||||||||||||||||||||||||||||
Sbjct: 117 atgagaatcttgatgatgctgcatcggc 144
>40063_ath-MIR172a:mirbase
Length = 102
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 113 atgagaatcttgatgatgctgcatcggc 140
||||||||||||||||||||||||||||
Sbjct: 75 atgagaatcttgatgatgctgcatcggc 102
>41993_osa-MIR172d:mirbase
Length = 130
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 113 atgagaatcttgatgatgctgcatcggcaaa 143
||||||||||||||||||||||||| |||||
Sbjct: 88 atgagaatcttgatgatgctgcatcagcaaa 118
>41183_aqc-MIR172a:mirbase
Length = 135
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 112 tatgagaatcttgatgatgctgcatc 137
||||||||||||||||||||||||||
Sbjct: 94 tatgagaatcttgatgatgctgcatc 119
>40324_bra-MIR172b:mirbase
Length = 107
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 112 tatgagaatcttgatgatgctgcatc 137
||||||||||||||||||||||||||
Sbjct: 78 tatgagaatcttgatgatgctgcatc 103
>40323_bra-MIR172a:mirbase
Length = 119
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 112 tatgagaatcttgatgatgctgcatc 137
||||||||||||||||||||||||||
Sbjct: 83 tatgagaatcttgatgatgctgcatc 108
>40307_bol-MIR172b:mirbase
Length = 107
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 112 tatgagaatcttgatgatgctgcatc 137
||||||||||||||||||||||||||
Sbjct: 78 tatgagaatcttgatgatgctgcatc 103
>40306_bol-MIR172a:mirbase
Length = 119
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 112 tatgagaatcttgatgatgctgcatc 137
||||||||||||||||||||||||||
Sbjct: 83 tatgagaatcttgatgatgctgcatc 108
>40066_ath-MIR172d:mirbase
Length = 124
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 105 tttttcgtatgagaatcttgatgatgctgcatcggcaa 142
||||| || |||||||||||||||||||||| ||||||
Sbjct: 77 tttttggtttgagaatcttgatgatgctgcagcggcaa 114
>40064_ath-MIR172b:mirbase
Length = 95
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 112 tatgagaatcttgatgatgctgcatc 137
||||||||||||||||||||||||||
Sbjct: 67 tatgagaatcttgatgatgctgcatc 92
>39853_aly-MIR172b:mirbase
Length = 146
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 112 tatgagaatcttgatgatgctgcatc 137
||||||||||||||||||||||||||
Sbjct: 89 tatgagaatcttgatgatgctgcatc 114
>41725_ata-MIR172:mirbase
Length = 277
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 113 atgagaatcttgatgatgctgcatc 137
|||||||||||||||||||||||||
Sbjct: 206 atgagaatcttgatgatgctgcatc 230
>40067_ath-MIR172e:mirbase
Length = 125
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 117 gaatcttgatgatgctgcatcggcaaata 145
||||||||||||||||||||| |||||||
Sbjct: 96 gaatcttgatgatgctgcatcagcaaata 124
>40065_ath-MIR172c:mirbase
Length = 133
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 111 gtatgagaatcttgatgatgctgca 135
|||||||||||||||||||||||||
Sbjct: 93 gtatgagaatcttgatgatgctgca 117
>39856_aly-MIR172e:mirbase
Length = 133
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 117 gaatcttgatgatgctgcatcggcaaata 145
||||||||||||||||||||| |||||||
Sbjct: 99 gaatcttgatgatgctgcatcagcaaata 127
>39855_aly-MIR172d:mirbase
Length = 163
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 114 tgagaatcttgatgatgctgcatcggcaa 142
|||||||||||||||||||||| ||||||
Sbjct: 110 tgagaatcttgatgatgctgcagcggcaa 138
>39854_aly-MIR172c:mirbase
Length = 133
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 111 gtatgagaatcttgatgatgctgca 135
|||||||||||||||||||||||||
Sbjct: 93 gtatgagaatcttgatgatgctgca 117
>42778_zma-MIR172d:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 113 atgagaatcttgatgatgctgcat 136
||||||||||||||||||||||||
Sbjct: 51 atgagaatcttgatgatgctgcat 74
>42777_zma-MIR172c:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 113 atgagaatcttgatgatgctgcat 136
||||||||||||||||||||||||
Sbjct: 100 atgagaatcttgatgatgctgcat 123
>42776_zma-MIR172b:mirbase
Length = 126
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 113 atgagaatcttgatgatgctgcat 136
||||||||||||||||||||||||
Sbjct: 103 atgagaatcttgatgatgctgcat 126
>42775_zma-MIR172a:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 113 atgagaatcttgatgatgctgcat 136
||||||||||||||||||||||||
Sbjct: 60 atgagaatcttgatgatgctgcat 83
>42560_sbi-MIR172d:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 113 atgagaatcttgatgatgctgcat 136
||||||||||||||||||||||||
Sbjct: 65 atgagaatcttgatgatgctgcat 88
>42559_sbi-MIR172c:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 113 atgagaatcttgatgatgctgcat 136
||||||||||||||||||||||||
Sbjct: 96 atgagaatcttgatgatgctgcat 119
>42557_sbi-MIR172a:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 113 atgagaatcttgatgatgctgcat 136
||||||||||||||||||||||||
Sbjct: 79 atgagaatcttgatgatgctgcat 102
>41990_osa-MIR172a:mirbase
Length = 109
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 114 tgagaatcttgatgatgctgcatc 137
||||||||||||||||||||||||
Sbjct: 77 tgagaatcttgatgatgctgcatc 100
>41634_vvi-MIR172d:mirbase
Length = 109
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 113 atgagaatcttgatgatgctgcat 136
||||||||||||||||||||||||
Sbjct: 76 atgagaatcttgatgatgctgcat 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 117 gaatcttgatgatgctgcatc 137
|||||||||||||||||||||
Sbjct: 28 gaatcttgatgatgctgcatc 8
>41397_ptc-MIR172c:mirbase
Length = 128
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 114 tgagaatcttgatgatgctgcatc 137
||||||||||||||||||||||||
Sbjct: 97 tgagaatcttgatgatgctgcatc 120
>41395_ptc-MIR172a:mirbase
Length = 129
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 114 tgagaatcttgatgatgctgcatc 137
||||||||||||||||||||||||
Sbjct: 98 tgagaatcttgatgatgctgcatc 121
>41124_tcc-MIR172a:mirbase
Length = 154
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 111 gtatgagaatcttgatgatgctgcatcggcaa 142
||||| ||||||||||||||||||| ||||||
Sbjct: 110 gtatgggaatcttgatgatgctgcagcggcaa 141
>40463_gma-MIR172f:mirbase
Length = 133
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 114 tgagaatcttgatgatgctgcatc 137
||||||||||||||||||||||||
Sbjct: 107 tgagaatcttgatgatgctgcatc 130
>40459_gma-MIR172b:mirbase
Length = 153
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 114 tgagaatcttgatgatgctgcatc 137
||||||||||||||||||||||||
Sbjct: 112 tgagaatcttgatgatgctgcatc 135
>40458_gma-MIR172a:mirbase
Length = 159
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 114 tgagaatcttgatgatgctgcatc 137
||||||||||||||||||||||||
Sbjct: 118 tgagaatcttgatgatgctgcatc 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 117 gaatcttgatgatgctgcatcggcaaata 145
|||||||||||||||| |||| |||||||
Sbjct: 40 gaatcttgatgatgctacatccgcaaata 12
>41991_osa-MIR172b:mirbase
Length = 238
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 117 gaatcttgatgatgctgcatcgg 139
|||||||||||||||||||||||
Sbjct: 209 gaatcttgatgatgctgcatcgg 231
>41768_bdi-MIR172b:mirbase
Length = 254
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 117 gaatcttgatgatgctgcatcgg 139
|||||||||||||||||||||||
Sbjct: 205 gaatcttgatgatgctgcatcgg 227
>41543_sly-MIR172b:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 114 tgagaatcttgatgatgctgcat 136
|||||||||||||||||||||||
Sbjct: 113 tgagaatcttgatgatgctgcat 135
>41233_csi-MIR172a:mirbase
Length = 162
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 114 tgagaatcttgatgatgctgcatcggc 140
|||||||||||||||||||||| ||||
Sbjct: 113 tgagaatcttgatgatgctgcaacggc 139
>41126_tcc-MIR172c:mirbase
Length = 163
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 117 gaatcttgatgatgctgcatcggcaaa 143
||||||||||||||||||||| |||||
Sbjct: 124 gaatcttgatgatgctgcatcagcaaa 150
>41633_vvi-MIR172c:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 117 gaatcttgatgatgctgcatcggcaa 142
||||||||||||||||||| ||||||
Sbjct: 109 gaatcttgatgatgctgcagcggcaa 134
>41542_sly-MIR172a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 115 gagaatcttgatgatgctgcat 136
||||||||||||||||||||||
Sbjct: 85 gagaatcttgatgatgctgcat 106
>41402_ptc-MIR172h:mirbase
Length = 143
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 117 gaatcttgatgatgctgcatcggcaa 142
||||||||||||||||||| ||||||
Sbjct: 115 gaatcttgatgatgctgcagcggcaa 140
>41401_ptc-MIR172g:mirbase
Length = 143
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 117 gaatcttgatgatgctgcatcggcaa 142
||||||||||||||||||| ||||||
Sbjct: 115 gaatcttgatgatgctgcagcggcaa 140
>41184_aqc-MIR172b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 117 gaatcttgatgatgctgcatcg 138
||||||||||||||||||||||
Sbjct: 87 gaatcttgatgatgctgcatcg 108
>40366_rco-MIR172:mirbase
Length = 144
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 112 tatgagaatcttgatgatgctgcatcggca 141
|||| ||||||||||||||||||| |||||
Sbjct: 115 tatgggaatcttgatgatgctgcagcggca 144
>41127_tcc-MIR172d:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 114 tgagaatcttgatgatgctgcatcggcaa 142
|||||||| |||||||||||||| |||||
Sbjct: 87 tgagaatcctgatgatgctgcattggcaa 115
>42779_zma-MIR172e:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 117 gaatcttgatgatgctgcat 136
||||||||||||||||||||
Sbjct: 136 gaatcttgatgatgctgcat 155
>42558_sbi-MIR172b:mirbase
Length = 170
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 117 gaatcttgatgatgctgcat 136
||||||||||||||||||||
Sbjct: 151 gaatcttgatgatgctgcat 170
>40702_mtr-MIR172:mirbase
Length = 113
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 112 tatgagaatcttgatgatgctgca 135
|||||||||| |||||||||||||
Sbjct: 84 tatgagaatcctgatgatgctgca 107
>40462_gma-MIR172e:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 112 tatgagaatcttgatgatgctgca 135
|||| |||||||||||||||||||
Sbjct: 110 tatgggaatcttgatgatgctgca 133
>40461_gma-MIR172d:mirbase
Length = 150
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 112 tatgagaatcttgatgatgctgca 135
|||| |||||||||||||||||||
Sbjct: 107 tatgggaatcttgatgatgctgca 130
>40460_gma-MIR172c:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 112 tatgagaatcttgatgatgctgca 135
|||| |||||||||||||||||||
Sbjct: 110 tatgggaatcttgatgatgctgca 133
