miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46722_miR166:micropc
Length = 98
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 ggggaatgttggctggctcgaggcttttcagtttcacaaaggaagttcagtcttaattgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggggaatgttggctggctcgaggcttttcagtttcacaaaggaagttcagtcttaattgt 61
Query: 61 atgaactataaggcttcggaccaggcttcattcccc 96
||||||||||||||||||||||||||||||||||||
Sbjct: 62 atgaactataaggcttcggaccaggcttcattcccc 97
>46081_miR166:micropc
Length = 92
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 3 ggaatgttggctggctcgaggcttttcagtttcacaaaggaagttcagtcttaattgtat 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaatgttggctggctcgaggcttttcagtttcacaaaggaagttcagtcttaattgtat 60
Query: 63 gaactataaggcttcggaccaggcttcattcc 94
||||||||||||||||||||||||||||||||
Sbjct: 61 gaactataaggcttcggaccaggcttcattcc 92
>45302_miR166:micropc
Length = 92
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 3 ggaatgttggctggctcgaggcttttcagtttcacaaaggaagttcagtcttaattgtat 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaatgttggctggctcgaggcttttcagtttcacaaaggaagttcagtcttaattgtat 60
Query: 63 gaactataaggcttcggaccaggcttcattcc 94
||||||||||||||||||||||||||||||||
Sbjct: 61 gaactataaggcttcggaccaggcttcattcc 92
>46809_miR166:micropc
Length = 88
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 63 gaactataaggcttcggaccaggcttcattcccc 96
||||||||||||||||||||||||||||||||||
Sbjct: 54 gaactataaggcttcggaccaggcttcattcccc 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 ggggaatgttggctggctcgaggcttttca 30
||||||||||||||||||||||||||||||
Sbjct: 2 ggggaatgttggctggctcgaggcttttca 31
>45909_miR166:micropc
Length = 88
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 63 gaactataaggcttcggaccaggcttcattcccc 96
||||||||||||||||||||||||||||||||||
Sbjct: 54 gaactataaggcttcggaccaggcttcattcccc 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 ggggaatgttggctggctcgaggcttttca 30
||||||||||||||||||||||||||||||
Sbjct: 2 ggggaatgttggctggctcgaggcttttca 31
>45364_miR166:micropc
Length = 86
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 63 gaactataaggcttcggaccaggcttcattcccc 96
||||||||||||||||||||||||||||||||||
Sbjct: 53 gaactataaggcttcggaccaggcttcattcccc 86
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 ggggaatgttggctggctcgaggcttttca 30
||||||||||||||||||||||||||||||
Sbjct: 1 ggggaatgttggctggctcgaggcttttca 30
>44998_miR166:micropc
Length = 86
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 63 gaactataaggcttcggaccaggcttcattcccc 96
||||||||||||||||||||||||||||||||||
Sbjct: 53 gaactataaggcttcggaccaggcttcattcccc 86
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 ggggaatgttggctggctcgaggcttttca 30
||||||||||||||||||||||||||||||
Sbjct: 1 ggggaatgttggctggctcgaggcttttca 30
>46726_miR166:micropc
Length = 84
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 63 gaactataaggcttcggaccaggcttcattccc 95
|||||||||||||||||||||||||||||||||
Sbjct: 52 gaactataaggcttcggaccaggcttcattccc 84
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 2 gggaatgttggctggctcgaggcttttca 30
|||||||||||||||||||||||||||||
Sbjct: 1 gggaatgttggctggctcgaggcttttca 29
>46338_miR166:micropc
Length = 84
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 63 gaactataaggcttcggaccaggcttcattccc 95
|||||||||||||||||||||||||||||||||
Sbjct: 52 gaactataaggcttcggaccaggcttcattccc 84
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 2 gggaatgttggctggctcgaggcttttca 30
|||||||||||||||||||||||||||||
Sbjct: 1 gggaatgttggctggctcgaggcttttca 29
>46216_miR166:micropc
Length = 84
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 63 gaactataaggcttcggaccaggcttcattccc 95
|||||||||||||||||||||||||||||||||
Sbjct: 52 gaactataaggcttcggaccaggcttcattccc 84
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 2 gggaatgttggctggctcgaggcttttca 30
|||||||||||||||||||||||||||||
Sbjct: 1 gggaatgttggctggctcgaggcttttca 29
>46000_miR166:micropc
Length = 84
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 63 gaactataaggcttcggaccaggcttcattccc 95
|||||||||||||||||||||||||||||||||
Sbjct: 52 gaactataaggcttcggaccaggcttcattccc 84
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 2 gggaatgttggctggctcgaggcttttca 30
|||||||||||||||||||||||||||||
Sbjct: 1 gggaatgttggctggctcgaggcttttca 29
>44918_miR166:micropc
Length = 84
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 63 gaactataaggcttcggaccaggcttcattccc 95
|||||||||||||||||||||||||||||||||
Sbjct: 52 gaactataaggcttcggaccaggcttcattccc 84
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 2 gggaatgttggctggctcgaggcttttca 30
|||||||||||||||||||||||||||||
Sbjct: 1 gggaatgttggctggctcgaggcttttca 29
>45437_miR166:micropc
Length = 82
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 63 gaactataaggcttcggaccaggcttcattcc 94
||||||||||||||||||||||||||||||||
Sbjct: 51 gaactataaggcttcggaccaggcttcattcc 82
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 3 ggaatgttggctggctcgaggcttttca 30
||||||||||||||||||||||||||||
Sbjct: 1 ggaatgttggctggctcgaggcttttca 28
>44809_miR166:micropc
Length = 82
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 63 gaactataaggcttcggaccaggcttcattcc 94
||||||||||||||||||||||||||||||||
Sbjct: 51 gaactataaggcttcggaccaggcttcattcc 82
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 3 ggaatgttggctggctcgaggcttttca 30
||||||||||||||||||||||||||||
Sbjct: 1 ggaatgttggctggctcgaggcttttca 28
>45480_miR166:micropc
Length = 88
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 69 taaggcttcggaccaggcttcattcccc 96
||||||||||||||||||||||||||||
Sbjct: 60 taaggcttcggaccaggcttcattcccc 87
>45050_miR166:micropc
Length = 86
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 69 taaggcttcggaccaggcttcattcccc 96
||||||||||||||||||||||||||||
Sbjct: 59 taaggcttcggaccaggcttcattcccc 86
>45424_miR166:micropc
Length = 84
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 69 taaggcttcggaccaggcttcattccc 95
|||||||||||||||||||||||||||
Sbjct: 58 taaggcttcggaccaggcttcattccc 84
>45093_miR166:micropc
Length = 84
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 69 taaggcttcggaccaggcttcattccc 95
|||||||||||||||||||||||||||
Sbjct: 58 taaggcttcggaccaggcttcattccc 84
>45929_miR166:micropc
Length = 82
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 69 taaggcttcggaccaggcttcattcc 94
||||||||||||||||||||||||||
Sbjct: 57 taaggcttcggaccaggcttcattcc 82
>46579_miR166:micropc
Length = 78
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 ttcggaccaggcttcattcccc 96
||||||||||||||||||||||
Sbjct: 57 ttcggaccaggcttcattcccc 78
>46389_miR166:micropc
Length = 78
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 ttcggaccaggcttcattcccc 96
||||||||||||||||||||||
Sbjct: 57 ttcggaccaggcttcattcccc 78
>45042_miR166:micropc
Length = 78
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 ttcggaccaggcttcattcccc 96
||||||||||||||||||||||
Sbjct: 57 ttcggaccaggcttcattcccc 78
>46788_miR166:micropc
Length = 164
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tcggaccaggcttcattcccc 96
|||||||||||||||||||||
Sbjct: 144 tcggaccaggcttcattcccc 164
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ggggaatgttggctggctcgaggc 24
||||||||||| ||||||||||||
Sbjct: 1 ggggaatgttgtctggctcgaggc 24
>46747_miR166:micropc
Length = 114
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tcggaccaggcttcattcccc 96
|||||||||||||||||||||
Sbjct: 94 tcggaccaggcttcattcccc 114
>46646_miR166:micropc
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 75 ttcggaccaggcttcattccc 95
|||||||||||||||||||||
Sbjct: 80 ttcggaccaggcttcattccc 100
>46517_miR166:micropc
Length = 75
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tcggaccaggcttcattcccc 96
|||||||||||||||||||||
Sbjct: 55 tcggaccaggcttcattcccc 75
>46502_miR166:micropc
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tcggaccaggcttcattcccc 96
|||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattcccc 96
>46431_miR166:micropc
Length = 153
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tcggaccaggcttcattcccc 96
|||||||||||||||||||||
Sbjct: 133 tcggaccaggcttcattcccc 153
>46396_miR166:micropc
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 75 ttcggaccaggcttcattccc 95
|||||||||||||||||||||
Sbjct: 80 ttcggaccaggcttcattccc 100
>46070_miR166:micropc
Length = 142
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tcggaccaggcttcattcccc 96
|||||||||||||||||||||
Sbjct: 122 tcggaccaggcttcattcccc 142
>46012_miR166:micropc
Length = 116
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tcggaccaggcttcattcccc 96
|||||||||||||||||||||
Sbjct: 95 tcggaccaggcttcattcccc 115
>45842_miR166:micropc
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tcggaccaggcttcattcccc 96
|||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattcccc 96
>45509_miR166:micropc
Length = 199
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tcggaccaggcttcattcccc 96
|||||||||||||||||||||
Sbjct: 179 tcggaccaggcttcattcccc 199
>45504_miR166:micropc
Length = 170
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tcggaccaggcttcattcccc 96
|||||||||||||||||||||
Sbjct: 150 tcggaccaggcttcattcccc 170
>45478_miR166:micropc
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 75 ttcggaccaggcttcattccc 95
|||||||||||||||||||||
Sbjct: 80 ttcggaccaggcttcattccc 100
>45417_miR166:micropc
Length = 95
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tcggaccaggcttcattcccc 96
|||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccc 94
>45034_miR166:micropc
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tcggaccaggcttcattcccc 96
|||||||||||||||||||||
Sbjct: 77 tcggaccaggcttcattcccc 97
>45033_miR166:micropc
Length = 170
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tcggaccaggcttcattcccc 96
|||||||||||||||||||||
Sbjct: 150 tcggaccaggcttcattcccc 170
>45032_miR166:micropc
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tcggaccaggcttcattcccc 96
|||||||||||||||||||||
Sbjct: 77 tcggaccaggcttcattcccc 97
>44949_miR166:micropc
Length = 114
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tcggaccaggcttcattcccc 96
|||||||||||||||||||||
Sbjct: 94 tcggaccaggcttcattcccc 114
>44922_miR166:micropc
Length = 78
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tcggaccaggcttcattcccc 96
|||||||||||||||||||||
Sbjct: 58 tcggaccaggcttcattcccc 78
>44898_miR166:micropc
Length = 116
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tcggaccaggcttcattcccc 96
|||||||||||||||||||||
Sbjct: 95 tcggaccaggcttcattcccc 115
