miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48757_mtr-miR399i:pmrd
Length = 83
Score = 129 bits (65), Expect = 3e-31
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 1 gggcaatgacttttttggcagtagttcacttgatctttcagatgatgcaaacaaactcac 60
|||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 3 gggcaatgacttctttggcagtagttgacttgatcattcagatgatgcaaacaaactcac 62
Query: 61 tgccaaagaagatttgccccg 81
||||||||||||||||||||
Sbjct: 63 cgccaaagaagatttgccccg 83
>51751_ptc-miR399e:pmrd
Length = 114
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 56 ctcactgccaaagaagatttgccccg 81
||||||||||||||||||||||||||
Sbjct: 80 ctcactgccaaagaagatttgccccg 105
>51750_ptc-miR399d:pmrd
Length = 114
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 56 ctcactgccaaagaagatttgccccg 81
||||||||||||||||||||||||||
Sbjct: 80 ctcactgccaaagaagatttgccccg 105
>54883_vvi-miR399g:pmrd
Length = 113
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 56 ctcactgccaaagaagatttgcccc 80
||||||||||||| |||||||||||
Sbjct: 78 ctcactgccaaaggagatttgcccc 102
>48758_mtr-miR399j:pmrd
Length = 84
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 61 tgccaaagaagatttgccc 79
|||||||||||||||||||
Sbjct: 64 tgccaaagaagatttgccc 82
