miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00445;mir-399;AC160628.37/100813-100915 3880:Medicago
truncatula (barrel medic)
Length = 103
Score = 165 bits (83), Expect = 1e-40
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 ctgggcaatgacttctttggcagtagttgacttgatcattcagatgatgcaaacaaactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 ctgggcaatgacttctttggcagtagttgacttgatcattcagatgatgcaaacaaactc 70
Query: 61 accgccaaagaagatttgccccg 83
|||||||||||||||||||||||
Sbjct: 71 accgccaaagaagatttgccccg 93
>RF00445;mir-399;AARH01002114.1/23429-23543 3694:Populus trichocarpa
Length = 115
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 58 ctcaccgccaaagaagatttgccccg 83
||||| ||||||||||||||||||||
Sbjct: 80 ctcactgccaaagaagatttgccccg 105
>RF00445;mir-399;AARH01014736.1/14382-14268 3694:Populus trichocarpa
Length = 115
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 58 ctcaccgccaaagaagatttgccccg 83
||||| ||||||||||||||||||||
Sbjct: 80 ctcactgccaaagaagatttgccccg 105
>RF00445;mir-399;AASG02001979.1/11398-11282 3988:Ricinus communis
(castor bean)
Length = 117
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 58 ctcaccgccaaagaagatttgccccg 83
||||| ||||||||||||||||||||
Sbjct: 82 ctcactgccaaagaagatttgccccg 107
