miRNEST 2.0, an integrative microRNA resource :: BLAST
>48819_osa-miR159a:pmrd
Length = 272
Score = 464 bits (234), Expect = e-131
Identities = 248/252 (98%), Gaps = 3/252 (1%)
Strand = Plus / Plus
Query: 1 ttgagctcctttcggtccaaaaaggggtgttgctgtgggtcgattgagctgctgggtcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 ttgagctcctttcggtccaaaaaggggtgttgctgtgggtcgattgagctgctgggtcat 70
Query: 61 ggatcccgttagactactccatgttcatcattcagctcgagatctgaaagaaactactcc 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 ggatcccgttagcctactccatgttcatcattcagctcgagatctgaaagaaactactcc 130
Query: 121 aatttatactaatagtatgtgtgtagataggaaaatgatggagtactc---gttgggata 177
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 131 aatttatactaatagtatgtgtgtagataggaaaatgatggagtactcgttgttgggata 190
Query: 178 ggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctctttggattg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctctttggattg 250
Query: 238 aagggagctctg 249
||||||||||||
Sbjct: 251 aagggagctctg 262
>48796_oru-miR159:pmrd
Length = 274
Score = 464 bits (234), Expect = e-131
Identities = 248/252 (98%), Gaps = 3/252 (1%)
Strand = Plus / Plus
Query: 1 ttgagctcctttcggtccaaaaaggggtgttgctgtgggtcgattgagctgctgggtcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 ttgagctcctttcggtccaaaaaggggtgttgctgtgggtcgattgagctgctgggtcat 70
Query: 61 ggatcccgttagactactccatgttcatcattcagctcgagatctgaaagaaactactcc 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 ggatcccgttagcctactccatgttcatcattcagctcgagatctgaaagaaactactcc 130
Query: 121 aatttatactaatagtatgtgtgtagataggaaaatgatggagtactc---gttgggata 177
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 131 aatttatactaatagtatgtgtgtagataggaaaatgatggagtactcgttgttgggata 190
Query: 178 ggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctctttggattg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctctttggattg 250
Query: 238 aagggagctctg 249
||||||||||||
Sbjct: 251 aagggagctctg 262
>54674_tae-miR159b:pmrd
Length = 255
Score = 460 bits (232), Expect = e-130
Identities = 246/250 (98%), Gaps = 3/250 (1%)
Strand = Plus / Plus
Query: 3 gagctcctttcggtccaaaaaggggtgttgctgtgggtcgattgagctgctgggtcatgg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagctcctttcggtccaaaaaggggtgttgctgtgggtcgattgagctgctgggtcatgg 60
Query: 63 atcccgttagactactccatgttcatcattcagctcgagatctgaaagaaactactccaa 122
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcccgttagcctactccatgttcatcattcagctcgagatctgaaagaaactactccaa 120
Query: 123 tttatactaatagtatgtgtgtagataggaaaatgatggagtactc---gttgggatagg 179
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 121 tttatactaatagtatgtgtgtagataggaaaatgatggagtactcgttgttgggatagg 180
Query: 180 cttatggcttgcatgccccaggagctgcatcaaccctacatggaccctctttggattgaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttatggcttgcatgccccaggagctgcatcaaccctacatggaccctctttggattgaa 240
Query: 240 gggagctctg 249
||||||||||
Sbjct: 241 gggagctctg 250
>51338_pgl-miR159:pmrd
Length = 226
Score = 50.1 bits (25), Expect = 8e-07
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 174 gataggcttatggcttgcatgccccaggagctgcatcaaccc-tacatggaccctctttg 232
||||||||| ||||||||||| || |||||||||| | ||| | ||| | |||||||
Sbjct: 150 gataggcttgtggcttgcatgaccgaggagctgcaccgtccccttgctggccgctctttg 209
Query: 233 gattgaagggagctctg 249
|||||||||||||||||
Sbjct: 210 gattgaagggagctctg 226
>54930_zma-miR159a:pmrd
Length = 246
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 226 ctctttggattgaagggagctctg 249
||||||||||||||||||||||||
Sbjct: 204 ctctttggattgaagggagctctg 227
>54631_sof-miR159d:pmrd
Length = 265
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 226 ctctttggattgaagggagctctg 249
||||||||||||||||||||||||
Sbjct: 223 ctctttggattgaagggagctctg 246
>54629_sof-miR159b:pmrd
Length = 266
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 226 ctctttggattgaagggagctctg 249
||||||||||||||||||||||||
Sbjct: 224 ctctttggattgaagggagctctg 247
>54628_sof-miR159a:pmrd
Length = 265
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 226 ctctttggattgaagggagctctg 249
||||||||||||||||||||||||
Sbjct: 223 ctctttggattgaagggagctctg 246
>54392_sar-miR159:pmrd
Length = 175
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 226 ctctttggattgaagggagctctg 249
||||||||||||||||||||||||
Sbjct: 152 ctctttggattgaagggagctctg 175
>48820_osa-miR159b:pmrd
Length = 188
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 226 ctctttggattgaagggagctctg 249
||||||||||||||||||||||||
Sbjct: 155 ctctttggattgaagggagctctg 178
>54378_pvu-miR159:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 227 tctttggattgaagggagctct 248
||||||||||||||||||||||
Sbjct: 151 tctttggattgaagggagctct 172
>54377_pvu-miR159:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 227 tctttggattgaagggagctct 248
||||||||||||||||||||||
Sbjct: 151 tctttggattgaagggagctct 172
>48699_mtr-miR159a:pmrd
Length = 168
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 227 tctttggattgaagggagctct 248
||||||||||||||||||||||
Sbjct: 146 tctttggattgaagggagctct 167
>48539_gma-miR159a:pmrd
Length = 214
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 227 tctttggattgaagggagctct 248
||||||||||||||||||||||
Sbjct: 173 tctttggattgaagggagctct 194
>48395_bra-miR159a:pmrd
Length = 185
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 227 tctttggattgaagggagctct 248
||||||||||||||||||||||
Sbjct: 161 tctttggattgaagggagctct 182
>48339_bna-miR159:pmrd
Length = 183
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 227 tctttggattgaagggagctct 248
||||||||||||||||||||||
Sbjct: 159 tctttggattgaagggagctct 180
>46932_ath-miR159b:pmrd
Length = 196
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 227 tctttggattgaagggagctct 248
||||||||||||||||||||||
Sbjct: 166 tctttggattgaagggagctct 187
>46931_ath-miR159a:pmrd
Length = 184
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 227 tctttggattgaagggagctct 248
||||||||||||||||||||||
Sbjct: 161 tctttggattgaagggagctct 182
>54937_zma-miR159m:pmrd
Length = 457
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 229 tttggattgaagggagctctg 249
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctg 21
>54931_zma-miR159b:pmrd
Length = 221
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 229 tttggattgaagggagctctg 249
|||||||||||||||||||||
Sbjct: 182 tttggattgaagggagctctg 202
>54777_vvi-miR159c:pmrd
Length = 190
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 173 ggataggcttatggcttgcatgccccaggagctgcat 209
|||||||||| |||||||||| | ||||||||||||
Sbjct: 103 ggataggcttgtggcttgcatatctcaggagctgcat 139
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 229 tttggattgaagggagctct 248
||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctct 179
>54673_tae-miR159a:pmrd
Length = 177
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 229 tttggattgaagggagctctg 249
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctctg 174
>54653_spr-miR159:pmrd
Length = 392
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 229 tttggattgaagggagctctg 249
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctg 21
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 224 ccctctttggattgaagggagctct 248
|||| ||||||||||||||||||||
Sbjct: 144 ccctttttggattgaagggagctct 168
>51604_ptc-miR159c:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 224 ccctctttggattgaagggagctct 248
|||| ||||||||||||||||||||
Sbjct: 149 ccctttttggattgaagggagctct 173
>51602_ptc-miR159a:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 224 ccctctttggattgaagggagctct 248
|||| ||||||||||||||||||||
Sbjct: 149 ccctttttggattgaagggagctct 173
>48657_hvv-miR159b:pmrd
Length = 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 229 tttggattgaagggagctctg 249
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctctg 174
>48656_hvv-miR159a:pmrd
Length = 303
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 229 tttggattgaagggagctctg 249
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctg 21
>54540_sly-miR159:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 229 tttggattgaagggagctct 248
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>51603_ptc-miR159b:pmrd
Length = 187
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 229 tttggattgaagggagctct 248
||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177
>48701_mtr-miR159c:pmrd
Length = 44
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 229 tttggattgaagggagctct 248
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>48686_ltu-miR159:pmrd
Length = 345
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 229 tttggattgaagggagctct 248
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20