miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41941_osa-MIR166e:mirbase
Length = 137
Score = 272 bits (137), Expect = 6e-74
Identities = 137/137 (100%)
Strand = Plus / Plus
Query: 1 tgtttctgggtggaatgttgtctggttcaaggccccttaggatgtgtgatttttgatggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtttctgggtggaatgttgtctggttcaaggccccttaggatgtgtgatttttgatggt 60
Query: 61 ttatgcattcatcttgatgcgaacatctatctcggatctttgggttctcgaaccaggctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttatgcattcatcttgatgcgaacatctatctcggatctttgggttctcgaaccaggctt 120
Query: 121 cattcccctcagagata 137
|||||||||||||||||
Sbjct: 121 cattcccctcagagata 137
>41937_osa-MIR166a:mirbase
Length = 145
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 101 tgggttctcgaaccaggcttcattcccctcagagata 137
|||| ||||| ||||||||||||||||||||||||||
Sbjct: 103 tgggatctcggaccaggcttcattcccctcagagata 139
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 4 ttctgggtggaatgttgtctggttcaagg 32
||||| |||||||||||||||||||||||
Sbjct: 14 ttctgagtggaatgttgtctggttcaagg 42
>41745_bdi-MIR166c:mirbase
Length = 172
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 4 ttctgggtggaatgttgtctggttcaagg 32
|||||||||||||||||||||||||||||
Sbjct: 23 ttctgggtggaatgttgtctggttcaagg 51
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 106 tctcgaaccaggcttcattcccctcagagata 137
||||| ||||||||||||||||||||||||||
Sbjct: 119 tctcggaccaggcttcattcccctcagagata 150
>42720_zma-MIR166d:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 gtggaatgttgtctggttcaagg 32
|||||||||||||||||||||||
Sbjct: 1 gtggaatgttgtctggttcaagg 23
>42718_zma-MIR166b:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 gtggaatgttgtctggttcaagg 32
|||||||||||||||||||||||
Sbjct: 1 gtggaatgttgtctggttcaagg 23
>42508_sbi-MIR166a:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 gtggaatgttgtctggttcaagg 32
|||||||||||||||||||||||
Sbjct: 1 gtggaatgttgtctggttcaagg 23
>40347_rco-MIR166a:mirbase
Length = 149
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ggaatgttgtctggttcaaggcc 34
|||||||||||||||||||||||
Sbjct: 6 ggaatgttgtctggttcaaggcc 28
>40038_ath-MIR166g:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 105 ttctcgaaccaggcttcattcccctca 131
|||||| ||||||||||||||||||||
Sbjct: 82 ttctcggaccaggcttcattcccctca 108
>39827_aly-MIR166g:mirbase
Length = 131
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 105 ttctcgaaccaggcttcattcccctca 131
|||||| ||||||||||||||||||||
Sbjct: 86 ttctcggaccaggcttcattcccctca 112
>39734_smo-MIR166b:mirbase
Length = 136
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 106 tctcgaaccaggcttcattcccctcag 132
||||| |||||||||||||||||||||
Sbjct: 97 tctcggaccaggcttcattcccctcag 123
>41942_osa-MIR166f:mirbase
Length = 107
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 106 tctcgaaccaggcttcattcccctca 131
||||| ||||||||||||||||||||
Sbjct: 70 tctcggaccaggcttcattcccctca 95
>41940_osa-MIR166d:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 106 tctcgaaccaggcttcattcccctca 131
||||| ||||||||||||||||||||
Sbjct: 89 tctcggaccaggcttcattcccctca 114
>41747_bdi-MIR166e:mirbase
Length = 151
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 106 tctcgaaccaggcttcattcccctca 131
||||| ||||||||||||||||||||
Sbjct: 97 tctcggaccaggcttcattcccctca 122
>41334_ptc-MIR166m:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 106 tctcgaaccaggcttcattcccctca 131
||||| ||||||||||||||||||||
Sbjct: 74 tctcggaccaggcttcattcccctca 99
>39733_smo-MIR166a:mirbase
Length = 145
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 106 tctcgaaccaggcttcattcccctca 131
||||| ||||||||||||||||||||
Sbjct: 106 tctcggaccaggcttcattcccctca 131
>39469_ppt-MIR166f:mirbase
Length = 123
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 107 ctcgaaccaggcttcattcccctcag 132
|||| |||||||||||||||||||||
Sbjct: 73 ctcggaccaggcttcattcccctcag 98
>42517_sbi-MIR166j:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 10 gtggaatgttgtctggttcaaggcc 34
||||||||||||||||||| |||||
Sbjct: 2 gtggaatgttgtctggttctaggcc 26
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 107 ctcgaaccaggcttcattcccctca 131
|||| ||||||||||||||||||||
Sbjct: 84 ctcggaccaggcttcattcccctca 108
>41586_vvi-MIR166d:mirbase
Length = 160
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 107 ctcgaaccaggcttcattcccctca 131
|||| ||||||||||||||||||||
Sbjct: 128 ctcggaccaggcttcattcccctca 152
>41333_ptc-MIR166l:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 gaatgttgtctggttcaaggc 33
|||||||||||||||||||||
Sbjct: 14 gaatgttgtctggttcaaggc 34
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 107 ctcgaaccaggcttcattcccctca 131
|||| ||||||||||||||||||||
Sbjct: 67 ctcggaccaggcttcattcccctca 91
>41330_ptc-MIR166i:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 107 ctcgaaccaggcttcattcccctca 131
|||| ||||||||||||||||||||
Sbjct: 73 ctcggaccaggcttcattcccctca 97
>39735_smo-MIR166c:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 112 accaggcttcattcccctcag 132
|||||||||||||||||||||
Sbjct: 111 accaggcttcattcccctcag 131
>39470_ppt-MIR166g:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 112 accaggcttcattcccctcag 132
|||||||||||||||||||||
Sbjct: 100 accaggcttcattcccctcag 120
>39468_ppt-MIR166e:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 112 accaggcttcattcccctcag 132
|||||||||||||||||||||
Sbjct: 100 accaggcttcattcccctcag 120
>39465_ppt-MIR166b:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 112 accaggcttcattcccctcag 132
|||||||||||||||||||||
Sbjct: 78 accaggcttcattcccctcag 98
>39464_ppt-MIR166a:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 112 accaggcttcattcccctcag 132
|||||||||||||||||||||
Sbjct: 78 accaggcttcattcccctcag 98
>41589_vvi-MIR166g:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 accaggcttcattcccctca 131
||||||||||||||||||||
Sbjct: 73 accaggcttcattcccctca 92
>41588_vvi-MIR166f:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 accaggcttcattcccctca 131
||||||||||||||||||||
Sbjct: 73 accaggcttcattcccctca 92
>41531_sly-MIR166a:mirbase
Length = 111
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 accaggcttcattcccctca 131
||||||||||||||||||||
Sbjct: 90 accaggcttcattcccctca 109
>41327_ptc-MIR166f:mirbase
Length = 105
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 accaggcttcattcccctca 131
||||||||||||||||||||
Sbjct: 80 accaggcttcattcccctca 99
>41325_ptc-MIR166d:mirbase
Length = 105
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 accaggcttcattcccctca 131
||||||||||||||||||||
Sbjct: 80 accaggcttcattcccctca 99
>41171_aqc-MIR166e:mirbase
Length = 147
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 accaggcttcattcccctca 131
||||||||||||||||||||
Sbjct: 125 accaggcttcattcccctca 144
>41025_pvu-MIR166a:mirbase
Length = 670
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 105 ttctcgaaccaggcttcattcccc 128
|||||| |||||||||||||||||
Sbjct: 225 ttctcggaccaggcttcattcccc 248
>40674_mtr-MIR166g:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 105 ttctcgaaccaggcttcattcccc 128
|||||| |||||||||||||||||
Sbjct: 79 ttctcggaccaggcttcattcccc 102
>40672_mtr-MIR166e:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 accaggcttcattcccctca 131
||||||||||||||||||||
Sbjct: 85 accaggcttcattcccctca 104
>40440_gma-MIR166b:mirbase
Length = 167
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 105 ttctcgaaccaggcttcattcccc 128
|||||| |||||||||||||||||
Sbjct: 125 ttctcggaccaggcttcattcccc 148
>40267_bna-MIR166d:mirbase
Length = 128
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 105 ttctcgaaccaggcttcattcccc 128
|||||| |||||||||||||||||
Sbjct: 74 ttctcggaccaggcttcattcccc 97
>40266_bna-MIR166c:mirbase
Length = 128
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 accaggcttcattcccctca 131
||||||||||||||||||||
Sbjct: 97 accaggcttcattcccctca 116
>40265_bna-MIR166b:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 accaggcttcattcccctca 131
||||||||||||||||||||
Sbjct: 95 accaggcttcattcccctca 114
>40037_ath-MIR166f:mirbase
Length = 105
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 accaggcttcattcccctca 131
||||||||||||||||||||
Sbjct: 82 accaggcttcattcccctca 101
>40036_ath-MIR166e:mirbase
Length = 143
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 accaggcttcattcccctca 131
||||||||||||||||||||
Sbjct: 123 accaggcttcattcccctca 142
>40035_ath-MIR166d:mirbase
Length = 113
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 105 ttctcgaaccaggcttcattcccc 128
|||||| |||||||||||||||||
Sbjct: 84 ttctcggaccaggcttcattcccc 107
>40034_ath-MIR166c:mirbase
Length = 139
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 105 ttctcgaaccaggcttcattcccc 128
|||||| |||||||||||||||||
Sbjct: 100 ttctcggaccaggcttcattcccc 123
>39826_aly-MIR166f:mirbase
Length = 105
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 accaggcttcattcccctca 131
||||||||||||||||||||
Sbjct: 82 accaggcttcattcccctca 101
>39825_aly-MIR166e:mirbase
Length = 200
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 accaggcttcattcccctca 131
||||||||||||||||||||
Sbjct: 154 accaggcttcattcccctca 173
>39824_aly-MIR166d:mirbase
Length = 113
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 105 ttctcgaaccaggcttcattcccc 128
|||||| |||||||||||||||||
Sbjct: 84 ttctcggaccaggcttcattcccc 107
>39823_aly-MIR166c:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 105 ttctcgaaccaggcttcattcccc 128
|||||| |||||||||||||||||
Sbjct: 92 ttctcggaccaggcttcattcccc 115
>39421_pta-MIR166b:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 accaggcttcattcccctca 131
||||||||||||||||||||
Sbjct: 94 accaggcttcattcccctca 113
