miRNEST 2.0, an integrative microRNA resource :: BLAST
>45687_miR819:micropc
Length = 84
Score = 81.8 bits (41), Expect = 2e-16
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 35 tcatattataagactttctatcattgcccacattcatatagatgctaatgaat 87
|||||||||||||||||||| ||||||||||||||||||| ||| ||||||||
Sbjct: 84 tcatattataagactttctagcattgcccacattcatatatatgttaatgaat 32
Score = 50.1 bits (25), Expect = 6e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 108 gaatgtgggcaatactagatagtcttataatat 140
||||||||||||| ||||| |||||||||||||
Sbjct: 50 gaatgtgggcaatgctagaaagtcttataatat 82
>44978_miR1130:micropc
Length = 144
Score = 79.8 bits (40), Expect = 6e-16
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 27 cctccgtttcatattataagactttctatcattgcccacattcatatagatgctaatgaa 86
||||||||||||| | |||||||||||| ||||| ||||||| ||||| |||||||||||
Sbjct: 1 cctccgtttcataatgtaagactttctagcattgtccacatttatatatatgctaatgaa 60
Query: 87 tcta 90
||||
Sbjct: 61 tcta 64
Score = 40.1 bits (20), Expect = 5e-04
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 27 cctccgtttcatattataagactttctatcattgcccacattcatatagatg 78
|||| |||||||| | |||||||||||| |||| || |||||||||||||
Sbjct: 144 cctctgtttcataatgtaagactttctagcattacctgtattcatatagatg 93
>46437_miR1436:micropc
Length = 108
Score = 73.8 bits (37), Expect = 4e-14
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 23 actccctccgtttcatattataagactttctatcattgcccacattcatatagatgctaa 82
||||||||||||||||| | ||||| |||||| |||||||||||| ||||||||| |||
Sbjct: 108 actccctccgtttcataatgtaagattttctagcattgcccacatacatatagatattaa 49
Query: 83 tgaat 87
|||||
Sbjct: 48 tgaat 44
>45215_miR1120:micropc
Length = 142
Score = 63.9 bits (32), Expect = 4e-11
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 28 ctccgtttcatattataagactttctatcattgcccacattcatatagatgctaatgaat 87
|||||||||||| ||||||| |||||| |||||| || || |||||||||| ||||||||
Sbjct: 142 ctccgtttcataatataagaatttctaacattgctcatatacatatagatgttaatgaat 83
Score = 58.0 bits (29), Expect = 2e-09
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 28 ctccgtttcatattataagactttctatcattgcccacattcatatagatgctaatgaat 87
|||||||| ||| | ||| |||||||| |||||||||| ||||| || ||| ||||||||
Sbjct: 1 ctccgttttataatgtaaaactttctagcattgcccacgttcatttatatgttaatgaat 60
Query: 88 ctaga 92
|||||
Sbjct: 61 ctaga 65
>45731_miR446:micropc
Length = 86
Score = 60.0 bits (30), Expect = 6e-10
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 56 cattgcccacattcatatagatgctaatgaatctagac 93
|||||||||||||||||| |||| ||||||||||||||
Sbjct: 86 cattgcccacattcatattgatgttaatgaatctagac 49
Score = 46.1 bits (23), Expect = 9e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 56 cattgcccacattcatatagatgctaatgaatcta 90
||||| |||||||||||||||| |||||||||||
Sbjct: 1 cattgtccacattcatatagattttaatgaatcta 35
>45603_miR819:micropc
Length = 61
Score = 60.0 bits (30), Expect = 6e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 40 ttataagactttctatcattgcccacattcatat 73
||||||||||||||| ||||||||||||||||||
Sbjct: 6 ttataagactttctagcattgcccacattcatat 39
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 108 gaatgtgggcaatactagatagtcttataa 137
||||||||||||| ||||| ||||||||||
Sbjct: 35 gaatgtgggcaatgctagaaagtcttataa 6
>46464_miR1132:micropc
Length = 149
Score = 56.0 bits (28), Expect = 9e-09
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 28 ctccgtttcatattataagactttctatcattgcccacattcatatagatgctaatgaat 87
|||||||||| | | ||| |||||||| |||||| || |||||||||||| ||||||||
Sbjct: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
Query: 88 ctag 91
||||
Sbjct: 64 ctag 67
Score = 46.1 bits (23), Expect = 9e-06
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 24 ctccctccgtttcatattataagactttctatcattgcccacattcatatagatgctaat 83
|||||||||||||||| | || || |||||| || | |||| ||| ||||||| | ||||
Sbjct: 149 ctccctccgtttcataatgtaggattttctagcactacccatatttatatagaagttaat 90
Query: 84 gaatcta 90
|||||||
Sbjct: 89 gaatcta 83
>45514_miR1132:micropc
Length = 149
Score = 56.0 bits (28), Expect = 9e-09
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 28 ctccgtttcatattataagactttctatcattgcccacattcatatagatgctaatgaat 87
|||||||||| | | ||| |||||||| |||||| || |||||||||||| ||||||||
Sbjct: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
Query: 88 ctag 91
||||
Sbjct: 64 ctag 67
Score = 46.1 bits (23), Expect = 9e-06
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 24 ctccctccgtttcatattataagactttctatcattgcccacattcatatagatgctaat 83
|||||||||||||||| | || || |||||| || | |||| ||| ||||||| | ||||
Sbjct: 149 ctccctccgtttcataatgtaggattttctagcactacccatatttatatagaagttaat 90
Query: 84 gaatcta 90
|||||||
Sbjct: 89 gaatcta 83
>45099_miR1132:micropc
Length = 149
Score = 56.0 bits (28), Expect = 9e-09
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 28 ctccgtttcatattataagactttctatcattgcccacattcatatagatgctaatgaat 87
|||||||||| | | ||| |||||||| |||||| || |||||||||||| ||||||||
Sbjct: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
Query: 88 ctag 91
||||
Sbjct: 64 ctag 67
Score = 46.1 bits (23), Expect = 9e-06
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 24 ctccctccgtttcatattataagactttctatcattgcccacattcatatagatgctaat 83
|||||||||||||||| | || || |||||| || | |||| ||| ||||||| | ||||
Sbjct: 149 ctccctccgtttcataatgtaggattttctagcactacccatatttatatagaagttaat 90
Query: 84 gaatcta 90
|||||||
Sbjct: 89 gaatcta 83
>44937_miR819:micropc
Length = 94
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 35 tcatattataagactttctatcattgcccacattcatata 74
||||||||||||||||||||| |||||||| ||| |||||
Sbjct: 94 tcatattataagactttctattattgcccatatttatata 55
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 113 tgggcaatactagatagtcttataatat 140
||||||||| |||| |||||||||||||
Sbjct: 65 tgggcaataatagaaagtcttataatat 92
>46801_miR809:micropc
Length = 110
Score = 54.0 bits (27), Expect = 4e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 50 ttctatcattgcccacattcatatagatgctaatgaatctaga 92
|||||||||| ||||||||||||| ||| |||||||||||||
Sbjct: 2 ttctatcatttcccacattcatattaatgttaatgaatctaga 44
>45260_miR819:micropc
Length = 116
Score = 54.0 bits (27), Expect = 4e-08
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 40 ttataagactttctatcattgcccacattcatatagatgctaatgaatcta 90
||||||||||||||| |||| ||| ||||||||| ||| |||||||||||
Sbjct: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatcta 51
Score = 46.1 bits (23), Expect = 9e-06
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 40 ttataagactttctatcattgcccacattcatatagatgctaatgaatctagac 93
||||||||||||||| || | ||| ||| ||||||||| |||||||| |||||
Sbjct: 116 ttataagactttctagtatngtccatatttatatagatgttaatgaatatagac 63
>45075_miR819:micropc
Length = 116
Score = 54.0 bits (27), Expect = 4e-08
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 40 ttataagactttctatcattgcccacattcatatagatgctaatgaatcta 90
||||||||||||||| |||| ||| ||||||||| ||| |||||||||||
Sbjct: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatcta 51
Score = 46.1 bits (23), Expect = 9e-06
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 40 ttataagactttctatcattgcccacattcatatagatgctaatgaatctagac 93
||||||||||||||| || | ||| ||| ||||||||| |||||||| |||||
Sbjct: 116 ttataagactttctagtatngtccatatttatatagatgttaatgaatatagac 63
>46775_miR808:micropc
Length = 98
Score = 50.1 bits (25), Expect = 6e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 50 ttctatcattgcccacattcatatagatgctaatgaatcta 90
||||| |||| ||||||||||||| |||| |||||||||||
Sbjct: 98 ttctaacatttcccacattcatattgatgttaatgaatcta 58
>45913_miR809:micropc
Length = 100
Score = 50.1 bits (25), Expect = 6e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 50 ttctatcattgcccacattcatatagatgctaatgaatcta 90
||||| |||| ||||||||||||| |||| |||||||||||
Sbjct: 99 ttctaacatttcccacattcatattgatgttaatgaatcta 59
>46670_miR809:micropc
Length = 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 50 ttctatcattgcccacattcatatagatgctaatgaatctagac 93
||||| |||| |||||||||||||| ||| |||||||| |||||
Sbjct: 97 ttctaacattacccacattcatatatatgttaatgaatgtagac 54
>44980_miR808:micropc
Length = 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 50 ttctatcattgcccacattcatatagatgctaatgaatctagac 93
||||| |||| |||||||||||||| ||| |||||||| |||||
Sbjct: 97 ttctaacattacccacattcatatatatgttaatgaatgtagac 54
