miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 198 bits (100), Expect = 2e-50
Identities = 128/142 (90%)
Strand = Plus / Minus
Query: 18 ataatactccctccgtttcatattataagactttctatcattgcccacattcatatagat 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 ataatactccctccgtttcatattataagactttctatcattgcccacattcatatagat 83
Query: 78 gctaatgaatctagacnnnnnnnnnnnnnngaatgtgggcaatactagatagtcttataa 137
|||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 82 gctaatgaatctagacatatatatatatatgaatgtgggcaatactagatagtcttataa 23
Query: 138 tataaaacggaggaagtatatc 159
||||||||||||||||||||||
Sbjct: 22 tataaaacggaggaagtatatc 1
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatata 74
||||| ||||||||| ||||||||||||| |||| ||||||||||||||||||
Sbjct: 4 atacttcctccgttttatattataagactatctagtattgcccacattcatata 57
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagtat 156
||||||||||||| |||| ||||||||||||| ||||||||| |||||
Sbjct: 91 gaatgtgggcaatgatagaaagtcttataatatgaaacggagggagtat 139
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 70/72 (97%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgcta 99
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 98 atgaatctagac 87
Score = 107 bits (54), Expect = 5e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
|||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |
Sbjct: 4 atactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtt 63
Query: 81 aatgaa 86
||||||
Sbjct: 64 aatgaa 69
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||||||| ||||| ||||||||||||| ||||||||||||||
Sbjct: 111 gaatgtgggcaatgctagaaagtcttataatatgaaacggaggaagta 158
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 111 tgtgggcaatactagatagtcttataatataaaacggaggaagtat 156
|||||||||| ||||| ||||||||||||| ||||||||| |||||
Sbjct: 49 tgtgggcaatgctagaaagtcttataatatgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 123 bits (62), Expect = 9e-28
Identities = 68/70 (97%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 161 atactccctccgtttcatattataagactttctagcattgcccacattcatatagatgtt 102
Query: 81 aatgaatcta 90
||||||||||
Sbjct: 101 aatgaatcta 92
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 4 atacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtt 63
Query: 81 aatgaatcta 90
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 77.8 bits (39), Expect = 5e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagtatat 158
||||||||||||| ||||| ||||||||||||| |||||||||||||||||
Sbjct: 52 gaatgtgggcaatgctagaaagtcttataatatgaaacggaggaagtatat 2
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagtatat 158
||||||||||||| ||||| ||||||||||||| ||||||||| |||||||
Sbjct: 113 gaatgtgggcaatgctagaaagtcttataatatgaaacggagggagtatat 163
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 121 bits (61), Expect = 3e-27
Identities = 70/73 (95%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 127 atacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtt 68
Query: 81 aatgaatctagac 93
|||||||||||||
Sbjct: 67 aatgaatctagac 55
Score = 83.8 bits (42), Expect = 7e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcat 71
|||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagattttctagcattgcccacattcat 54
Score = 77.8 bits (39), Expect = 5e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagtatat 158
||||||||||||| ||||| ||||||||||||| |||||||||||||||||
Sbjct: 79 gaatgtgggcaatgctagaaagtcttataatatgaaacggaggaagtatat 129
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 117 bits (59), Expect = 5e-26
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgcccacattcatatagatgtta 100
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 99 atgaatctaga 89
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatg 78
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 4 atactccctccgtttcatattataagactttctagcattacccacattcatatagatg 61
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagtata 157
||||||||| ||| ||||| ||||||||||||| ||||||||| ||||||
Sbjct: 52 gaatgtgggtaatgctagaaagtcttataatatgaaacggagggagtata 3
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||||||| ||||| ||||||||||| | ||||||||| ||||
Sbjct: 112 gaatgtgggcaatgctagaaagtcttataatctgaaacggagggagta 159
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||| | | |||||||||||| |||||||||||||||||||||||||
Sbjct: 159 atactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgct 100
Query: 81 aatgaatctagac 93
|||||||||||||
Sbjct: 99 aatgaatctagac 87
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||||| | ||||||||| || |||| |||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgcta 64
Query: 82 atgaatcta 90
|| ||||||
Sbjct: 65 ataaatcta 73
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 111 bits (56), Expect = 3e-24
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
||||||||||||||||||||||||||||||||| ||||||||||||||||||| | | ||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcatatatacgtta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||||||| ||||| ||||||||||||| ||||||||| ||||
Sbjct: 52 gaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattg 60
|||| ||||| |||||||||||||||||||||| |||||
Sbjct: 128 tacttcctccttttcatattataagactttctagcattg 90
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 111 bits (56), Expect = 3e-24
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
||||||||||||||||||||||||||||||||| ||||||||||||||||||| | | ||
Sbjct: 128 tactccctccgtttcatattataagactttctagcattgcccacattcatatatacgtta 69
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 68 atgaatctagac 57
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||||||| ||||| ||||||||||||| ||||||||| ||||
Sbjct: 81 gaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 128
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattg 60
|||| ||||| |||||||||||||||||||||| |||||
Sbjct: 5 tacttcctccttttcatattataagactttctagcattg 43
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||||||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcatatagatgcta 81
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 80 atgaatctaga 70
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| |||| |||||||| |||||| ||||||| |||||| || ||||||||||||| ||
Sbjct: 5 tacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgtta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 4 atacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtt 63
Query: 81 aatgaatctag 91
|| ||||||||
Sbjct: 64 aacgaatctag 74
Score = 77.8 bits (39), Expect = 5e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagtatat 158
||||||||||||| ||||| ||||||||||||| |||||||||||||||||
Sbjct: 52 gaatgtgggcaatgctagaaagtcttataatatgaaacggaggaagtatat 2
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatata 74
|||| ||||| ||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 134 tactacctccatttcagattataagactttctagcattgcccacattcatata 82
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 109 bits (55), Expect = 1e-23
Identities = 112/134 (83%), Gaps = 6/134 (4%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| |||||||||||||||| |||| |||||||||||||| ||| ||
Sbjct: 132 tactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtta 73
Query: 82 atgaatctagacnnnnnnnnnnnnnngaatgtgggcaatactagatagtcttataatata 141
|||||||||||| ||||||||| ||||||||| |||||||||||||
Sbjct: 72 atgaatctagac------atatatatgaatgtgggtaatactagaaagtcttataatatg 19
Query: 142 aaacggaggaagta 155
||||||||||||||
Sbjct: 18 aaacggaggaagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatata 74
|||| |||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagtattacccacattcatata 57
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||| ||| ||||| ||||||||||| | ||||||||| ||||
Sbjct: 85 gaatgtgggtaatgctagaaagtcttataatttgaaacggagggagta 132
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||||||||||| ||||||||||||||||||| ||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 82 atgaatctag 91
||||||||||
Sbjct: 98 atgaatctag 89
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||| |||| |||||||| | |||||||||||| | ||||||||||| |||||||| ||
Sbjct: 4 atacttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagatact 63
Query: 81 aatgaatctagac 93
|||||||||||||
Sbjct: 64 aatgaatctagac 76
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||||||| ||||| ||||||| | ||| ||||||||| ||||
Sbjct: 111 gaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 158
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 109 aatgtgggcaatactagatagtcttataatataaaacggaggaagtatat 158
||||||||||| ||||| ||||||| | ||| |||| ||||||||||||
Sbjct: 51 aatgtgggcaacgctagaaagtcttacattatgaaacagaggaagtatat 2
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcatatagatgtta 73
Query: 82 atgaatcta 90
|||||||||
Sbjct: 72 atgaatcta 64
Score = 89.7 bits (45), Expect = 1e-17
Identities = 48/49 (97%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattca 70
||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattca 53
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||||||| ||||| ||||||||||||| |||| |||||||||
Sbjct: 85 gaatgtgggcaatgctagaaagtcttataatatgaaactgaggaagta 132
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||| |
Sbjct: 4 atactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtt 63
Query: 81 aatgaatctagac 93
||||||| |||||
Sbjct: 64 aatgaatttagac 76
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatg 78
|||||||||||||||||| | |||||||||||| |||||||||||||||||||||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatg 86
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagtata 157
||||||||||||| ||||| ||||||| | ||| ||||||||| ||||||
Sbjct: 52 gaatgtgggcaatgctagaaagtcttacattatgaaacggagggagtata 3
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcatatagatgtta 73
Query: 82 atgaatcta 90
|||||||||
Sbjct: 72 atgaatcta 64
Score = 89.7 bits (45), Expect = 1e-17
Identities = 48/49 (97%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattca 70
||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattca 53
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||||||| ||||| ||||||||||||| |||| |||||||||
Sbjct: 85 gaatgtgggcaatgctagaaagtcttataatatgaaactgaggaagta 132
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa
Japonica Group
Length = 159
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 5 tactccctctgtttcatattataagactttctagaattgcccacattcatatagatgtta 64
Query: 82 atgaatcta 90
|||||||||
Sbjct: 65 atgaatcta 73
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%), Gaps = 5/69 (7%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| |||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 155 tacttcctccgtttcatattataagactta-----attgcccacattcatatagatgtta 101
Query: 82 atgaatcta 90
|||||||||
Sbjct: 100 atgaatcta 92
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||||||| ||||| ||||||||||||| |||| |||| ||||
Sbjct: 52 gaatgtgggcaattctagaaagtcttataatatgaaacagagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 128 agtcttataatataaaacggaggaagta 155
||||||||||||| ||||||||||||||
Sbjct: 128 agtcttataatatgaaacggaggaagta 155
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||||||||||| ||||||||||||||||||||||| ||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 82 atgaatcta 90
|||||||||
Sbjct: 80 atgaatcta 72
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 29 tccgtttcatattataagactttctatcattgcccacattcatatagatgctaatg 84
||||||||||| | |||||||||||| ||||||| ||||||||||||||| |||||
Sbjct: 12 tccgtttcataatgtaagactttctagcattgcctacattcatatagatgttaatg 67
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||||||| ||||| ||||||| | ||| ||||||||| ||||
Sbjct: 93 gaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 140
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
Sbjct: 5 tacttcctccgtttcatattataagactttctaacattgcccacattcatatatatgtca 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| |
Sbjct: 158 tactccctccgtttcatattataagactttctagaattgtccatcttcatatagatgtca 99
Query: 82 atgaatcta 90
|||||||||
Sbjct: 98 atgaatcta 90
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||||||| |||| ||||||||||||| ||||||||||||||
Sbjct: 52 gaatgtgggcaatgttagaaagtcttataatatgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 117 caatactagatagtcttataatataaaacggaggaagta 155
|||| ||||| ||||||||||||| ||||||||| ||||
Sbjct: 120 caattctagaaagtcttataatatgaaacggagggagta 158
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| ||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgtccacattcacatagatgtta 64
Query: 82 atgaatctagac 93
|| |||||||||
Sbjct: 65 ataaatctagac 76
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatg 78
||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 138 atacttcctccgtttcatattataagactttctagcattgtccacattcatatagatg 81
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
|||||||| |||| ||||| ||||||||||||| ||||||||| ||||
Sbjct: 52 gaatgtggacaatgctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||||| | |||||||||||| ||||||||||||||| ||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgcta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||||||||||| |||||||| |||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 82 atgaatcta 90
|||||||||
Sbjct: 98 atgaatcta 90
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||||||| ||||| ||||||| | ||| ||||||||||||||
Sbjct: 52 gaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||| ||||||||||||| | |||||||||||| ||||||||||||||||||||||| |
Sbjct: 159 atacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtt 100
Query: 81 aatgaatctaga 92
||||||||||||
Sbjct: 99 aatgaatctaga 88
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | ||||||||| || |||| | |||||||||||||||| ||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagtata 157
||||||||||||| ||||| ||||||| | ||| ||||||||||||||||
Sbjct: 111 gaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagtata 160
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||| ||||||||||||| | |||||||||||| ||||||||||||||||||||||| |
Sbjct: 4 atacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtt 63
Query: 81 aatgaatctaga 92
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | ||||||||| || |||||| |||||||||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 98 atgaatctagac 87
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagtata 157
||||||||||||| ||||| ||||||| | ||| ||||||||||||||||
Sbjct: 52 gaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagtata 3
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||||||||||| |||||||||||| |||||||||| ||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtta 88
Query: 82 atgaatctag 91
||||||||||
Sbjct: 87 atgaatctag 78
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||||||||||| |||||| |||||||| |||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgtta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 110 atgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||||| ||||| ||||||| | ||| ||||||||| ||||
Sbjct: 102 atgtgggcaatgctagaaagtcttacattatgaaacggagggagta 147
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||| | | |||||||||||| ||||||||| |||||| ||||||||
Sbjct: 159 atactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgct 100
Query: 81 aatgaatctagac 93
|||||||||||||
Sbjct: 99 aatgaatctagac 87
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||||||||||| |||||||||||| |||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64
Query: 82 atgaatcta 90
|||||||||
Sbjct: 65 atgaatcta 73
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 110 atgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||||| ||||| ||||||| | | | ||||||||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 97.6 bits (49), Expect = 5e-20
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatata 74
||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcatata 57
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccac 65
|||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 104 tacttcctccgtttcatattataagactttctagcattgcccac 61
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||||||| ||||| ||||||||||||| ||||||||| ||||
Sbjct: 52 gaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 112 gtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||| ||||| ||||||||||||| ||||||||||||||
Sbjct: 61 gtgggcaatgctagaaagtcttataatatgaaacggaggaagta 104
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||||| | |||| ||||||| ||||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgc 61
||||||||||||||||||| | |||||||||||| ||||||
Sbjct: 123 atactccctccgtttcataatgtaagactttctagcattgc 83
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||||||| ||||| || |||| | ||| ||||||||||||||
Sbjct: 52 gaatgtgggcaatgctagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||||| | |||| ||||||| ||||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||||| | ||||||||| || |||||| | |||||| |||||| |
Sbjct: 157 atactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgtt 98
Query: 81 aatgaatctagac 93
|||||||||||||
Sbjct: 97 aatgaatctagac 85
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||||||| ||||| || |||| | ||| ||||||||||||||
Sbjct: 52 gaatgtgggcaatgctagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
||||||||| |||||||| | |||||||||||| ||||| ||||||||||||||||| ||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtta 73
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 72 atgaatctagac 61
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatg 78
||||| ||||| ||||||| | |||||||||||| ||||| |||||||||||||||||
Sbjct: 4 atacttcctccttttcataatgtaagactttctagcattgtccacattcatatagatg 61
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||||||||||| |||||||||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 98 atgaatctagac 87
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||||||||||| | |||||| ||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 82 atgaatctagac 93
|||||| |||||
Sbjct: 65 atgaatttagac 76
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||||||||||||| ||||||| | | | ||||||||| ||||
Sbjct: 111 gaatgtgggcaatactagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| |||| ||||||||||||||||||||||| ||||| ||||||||||||| ||| ||
Sbjct: 135 tacttcctctgtttcatattataagactttctagcattgtccacattcatatatatgtta 76
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 75 atgaatctagac 64
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatata 74
|||| |||||||||| ||||||||||||||||| |||| ||||||||||||||
Sbjct: 5 tacttcctccgtttcttattataagactttctagcattacccacattcatata 57
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
|||||||| |||| ||||| ||||||||||||| |||| |||||||||
Sbjct: 88 gaatgtggacaatgctagaaagtcttataatatgaaacagaggaagta 135
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||||||||||| |||||| || ||||||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 98 atgaatctagac 87
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||||| | |||| ||||||| |||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||||||||||||| || |||| | ||| ||||||||||||||
Sbjct: 52 gaatgtgggcaatactagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| |||||||||||||| |||||||| ||||||||||||| ||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 64
Query: 82 atgaatctaga 92
||||| |||||
Sbjct: 65 atgaacctaga 75
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||| | | ||||||||| || |||| ||||||||||||||||| |
Sbjct: 159 atactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtt 100
Query: 81 aatgaatctagac 93
|||||||||||||
Sbjct: 99 aatgaatctagac 87
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
|||| |||||||||||||| ||||||||| ||| ||||||||| ||||
Sbjct: 52 gaatatgggcaatactagaaagtcttatattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 93.7 bits (47), Expect = 8e-19
Identities = 50/51 (98%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcat 71
|||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 4 atactccctccgtttcatattataagactttctaacattgcccacattcat 54
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| |||||||||||||||||||||||||||| |||| |||| ||||||||||||| ||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattacccatattcatatagatgata 55
Query: 82 atgaat 87
||||||
Sbjct: 54 atgaat 49
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagtat 156
||||||||||||| |||| ||||||||||||| ||||||||| |||||
Sbjct: 52 gaatgtgggcaatgttagaaagtcttataatatgaaacggagggagtat 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
|||| |||| ||| ||||| ||||||||||||| ||||||||||||||
Sbjct: 67 gaatatgggtaatgctagaaagtcttataatatgaaacggaggaagta 114
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| |||||||||||||| |||||||| ||||||||||||| ||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 99
Query: 82 atgaatctaga 92
||||| |||||
Sbjct: 98 atgaacctaga 88
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||| | | ||||||||| || |||| ||||||||||||||||| |
Sbjct: 4 atactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtt 63
Query: 81 aatgaatctagac 93
|||||||||||||
Sbjct: 64 aatgaatctagac 76
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
|||| |||||||||||||| ||||||||| ||| ||||||||| ||||
Sbjct: 111 gaatatgggcaatactagaaagtcttatattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| |||||||||||||| |||| ||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcatactataagactttctagtattgtccacattcatataaatgcta 64
Query: 82 atgaat 87
||||||
Sbjct: 65 atgaat 70
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcat 71
|||| |||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattgcccatattcat 65
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
|||| |||||||| ||||| ||||||||||||| ||||||||||||||
Sbjct: 67 gaatatgggcaatgctagaaagtcttataatatgaaacggaggaagta 114
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatg 78
|||||||||||||||||| | |||||||||||| |||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatg 61
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||||| | ||| ||||| || ||||||||||||||||||||||| |
Sbjct: 143 atactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgtt 84
Query: 81 aatgaatctagac 93
||||||| |||||
Sbjct: 83 aatgaatttagac 71
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 25 tccctccgtttcatattataagactttctatcattgcccacattcatatagatgctaatg 84
||||||||||||||| | |||||||||||| ||||| ||||||||||||||||| ||| |
Sbjct: 105 tccctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacg 46
Query: 85 aatctagac 93
|||||||||
Sbjct: 45 aatctagac 37
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | |||||||||||||| |||| ||||||| |||||||||| ||
Sbjct: 136 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 77
Query: 82 atgaatcta 90
|||||||||
Sbjct: 76 atgaatcta 68
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 19 taatactccctccgtttcatattataagactttctatcattgcccacatt 68
||||||| ||||||||||| | ||||||||||| | ||||| |||||||
Sbjct: 2 taatacttcctccgtttcacaatataagactttttggcattgtccacatt 51
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | |||||||||||||| |||| ||||||| |||||||||| ||
Sbjct: 5 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 64
Query: 82 atgaatcta 90
|||||||||
Sbjct: 65 atgaatcta 73
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 19 taatactccctccgtttcatattataagactttctatcattgcccacatt 68
||||||| ||||||||||| | ||||||||||| | ||||| |||||||
Sbjct: 139 taatacttcctccgtttcacaatataagactttttggcattgtccacatt 90
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||| ||||||||||||| | |||||||||||| ||||| | ||||||||||||||| |
Sbjct: 4 atacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtt 63
Query: 81 aatgaatctagac 93
|||||||||||||
Sbjct: 64 aatgaatctagac 76
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||||||||||| ||| ||||||||||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtta 99
Query: 82 atgaatcta 90
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||||| | |||||||||||| ||||| ||||||||||||| ||| ||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtta 97
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 96 atgaatctagac 85
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||||||||||| ||||||| | |||||||| |||| ||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 82 atgaatctag 91
||||||||||
Sbjct: 65 atgaatctag 74
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
|||||||| |||| ||||| ||||||| | ||| ||||||||||||||
Sbjct: 109 gaatgtggacaatgctagaaagtcttacattatgaaacggaggaagta 156
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||||||||||| |||||||| ||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 98 atgaatctagac 87
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | |||||||||||| | |||||| ||||||||||||| ||
Sbjct: 5 tactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 82 atgaatctagac 93
|||||| |||||
Sbjct: 65 atgaatttagac 76
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||||||||||| ||||| ||||||||||||||||| ||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtta 81
Query: 82 atgaatctagac 93
|| |||||||||
Sbjct: 80 ataaatctagac 69
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatg 78
||||||||||||||||| | | ||||||||| || |||| ||| |||||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagactttttagcattatccatattcatatagatg 61
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||||||| ||| |||||| |||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | ||||||||| || ||||||||||||||| ||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 98 atgaatctaga 88
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||||||||||| ||||||||||||||||||||||| ||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtta 75
Query: 82 atgaatctagac 93
|| |||||||||
Sbjct: 74 ataaatctagac 63
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagat 77
|||||||||||||||||||| |||||||||||| ||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcatattgtaagactttctagcattgttcacattcatatagat 60
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||||||| ||||| ||||||| | | | ||||||||||||||
Sbjct: 87 gaatgtgggcaatgctagaaagtcttacattgtgaaacggaggaagta 134
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| ||||||||||||||| ||||||||||||||||||| ||| ||
Sbjct: 158 tactacctccgtttcaagttataagactttctagcattgcccacattcatatatatgtta 99
Query: 82 atgaatct 89
||||||||
Sbjct: 98 atgaatct 91
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||| ||||||||||| |||||||||||||| ||||||||||||||||||| ||| |
Sbjct: 4 atacttcctccgtttcaagttataagactttctggcattgcccacattcatatatatgtt 63
Query: 81 aatgaatctagac 93
||| |||||||||
Sbjct: 64 aataaatctagac 76
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagtat 156
||||||||||||| | ||| |||||||||| | |||||||||||||||
Sbjct: 52 gaatgtgggcaatgccagaaagtcttataacttgaaacggaggaagtat 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||||||| ||||| |||||||||| | ||||||||| ||||
Sbjct: 111 gaatgtgggcaatgctagaaagtcttataacttgaaacggaggtagta 158
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||| ||||||| | |||||||||||| ||||| ||||||||||||||||| |
Sbjct: 4 atactccctccatttcataatgtaagactttctagcattgtccacattcatatagatgtt 63
Query: 81 aatgaatctaga 92
||| ||||||||
Sbjct: 64 aataaatctaga 75
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcc 62
||||||||||||||||||| | |||||||||||| |||||||
Sbjct: 125 atactccctccgtttcataatgtaagactttctagcattgcc 84
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 19 taatactccctccgtttcatattataagactttctatcattgcccacattcatatagatg 78
|||||||| |||||||||||| | |||||||||||| ||||| ||| ||| |||||||||
Sbjct: 140 taatactctctccgtttcataatgtaagactttctagcattgtccatatttatatagatg 81
Query: 79 ctaatgaatctagac 93
||||||||||||||
Sbjct: 80 ttaatgaatctagac 66
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 28 ctccgtttcatattataagactttctatcattgcccacattcatatagatg 78
|||||||||||| | |||||||||||| ||||||||||||| |||||||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgcccacatttatatagatg 61
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 43 taagactttctatcattgcccacattcatatagatgctaatgaatctagac 93
|||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 116 taagactttctaacattgcccacattcatatagatgcaaatgaatctagac 66
Score = 73.8 bits (37), Expect = 7e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 43 taagactttctatcattgcccacattcatatagatgctaatgaatctag 91
|||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 5 taagactttctagcattgcccacattcatatctatgctaatgaatctag 53
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa
Japonica Group
Length = 160
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 27 cctccgtttcatattataagactttctatcattgcccacattcatatagatgctaatgaa 86
||||||||||||| |||||| | ||||| ||||||||||||||||||||||| |||||||
Sbjct: 10 cctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaa 69
Query: 87 tct 89
|||
Sbjct: 70 tct 72
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | |||||| | ||||| ||||||||||||| ||||||| |||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97
Query: 82 atgaatctag 91
||||||||||
Sbjct: 96 atgaatctag 87
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 20 aatactccctccgtttcatattataagactttctatcattgcccacattcatatagatgc 79
|||||| |||| |||||||| | |||||||||||| | ||||||||||||||||| |||
Sbjct: 3 aatacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgt 62
Query: 80 taatgaatctagac 93
||||||||||||||
Sbjct: 63 taatgaatctagac 76
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
||||||||| |||||||| | ||||||||| || |||||||||||||||||||||| |
Sbjct: 158 tactccctcggtttcataatgtaagactttttagcattgcccacattcatatagatatca 99
Query: 82 atgaatcta 90
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 83.8 bits (42), Expect = 7e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 42 ataagactttctatcattgcccacattcatatagatgctaatgaatctag 91
||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctag 65
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 42 ataagactttctatcattgcccacattcatatagatgctaatgaatctagac 93
||||||||||||| ||||| ||||||||||||| ||| ||||||||||||||
Sbjct: 1 ataagactttctagcattgtccacattcatatatatgttaatgaatctagac 52
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 83.8 bits (42), Expect = 7e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 42 ataagactttctatcattgcccacattcatatagatgctaatgaatctag 91
||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctag 65
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 42 ataagactttctatcattgcccacattcatatagatgctaatgaatctag 91
||||||||||||| ||||||||| ||||||||| ||| ||||||||||||
Sbjct: 1 ataagactttctagcattgcccatattcatatatatgttaatgaatctag 50
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 83.8 bits (42), Expect = 7e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 42 ataagactttctatcattgcccacattcatatagatgctaatgaatctag 91
||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctag 65
Score = 77.8 bits (39), Expect = 5e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 42 ataagactttctatcattgcccacattcatatagatgctaatgaatctaga 92
||||||||||||| ||||||||||||||||||| ||| |||||||||||||
Sbjct: 1 ataagactttctagcattgcccacattcatatatatgttaatgaatctaga 51
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||||| | |||| | ||||| |||| |||| ||||||||||||| |
Sbjct: 159 atactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtt 100
Query: 81 aatgaatctagac 93
|||||||||||||
Sbjct: 99 aatgaatctagac 87
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||||| | |||| | ||||| |||||||||||| |||||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 82 atgaatctaga 92
|||||| ||||
Sbjct: 65 atgaatttaga 75
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||| | || || ||||||||||||||||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 82 atgaatcta 90
|||||||||
Sbjct: 98 atgaatcta 90
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||||| | |||| | ||||| | || |||| || |||||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa
Japonica Group
Length = 160
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/72 (90%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||||| | |||||||||||| ||||| |||||| ||||||||| |
Sbjct: 4 atactccctccgtttcataatgtaagactttctaccattgtccacat--atatagatgtt 61
Query: 81 aatgaatctaga 92
||||||||||||
Sbjct: 62 aatgaatctaga 73
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | ||||||||| || ||||| ||||||| || ||||| ||
Sbjct: 156 tacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatatta 97
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 96 atgaatctaga 86
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||| | ||||| |||| || ||||||||||||||| ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||||| | |||| | ||||| |||||||||||| ||||||||| ||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 82 atgaatctaga 92
|||||| ||||
Sbjct: 98 atgaatttaga 88
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 18 ataatactccctccgtttcatattataagactttctatcattgcccacattcatatagat 77
||||||||||||| |||||||| | ||| | ||||| |||||||||||| |||||||||
Sbjct: 136 ataatactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagat 77
Query: 78 gctaatgaatctagac 93
| ||||||||||||||
Sbjct: 76 gttaatgaatctagac 61
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||||||||||| ||||||||| |||||| |||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 20 aatactccctccgtttcatattataagactttctatcattgcccacattcatatagatgc 79
|||||||||||||||||| | | |||||||||||| ||||||||| | ||||| ||||
Sbjct: 160 aatactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgt 101
Query: 80 taatgaatcta 90
|||||||||||
Sbjct: 100 taatgaatcta 90
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| ||| |||| | || ||||||| | |||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||| | | |||| | ||||| |||| |||||||||||||||||| |
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtt 100
Query: 81 aatgaatcta 90
|||||||||
Sbjct: 99 gatgaatcta 90
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||| | |||||| | ||||| |||| ||||||||||||| |||| |
Sbjct: 136 atactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtt 77
Query: 81 aatgaatctaga 92
||||||||||||
Sbjct: 76 aatgaatctaga 65
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | |||||| | ||||| |||| || |||||||||| |||||||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 92 atgaatctagac 81
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||| | ||||| |||| ||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||| | ||||| ||||||| | ||||||||||||| ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||||| | |||| | ||||| || ||| ||||||||||| |||| ||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 98 atgaatctaga 88
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| |||||| |||||| |||||||||||||| |||||||||| |||| ||||||| |
Sbjct: 158 tacttcctccgcttcataatataagactttctagcattgcccacgttcacatagatgtca 99
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 98 atgaatctagac 87
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||||||||||| || || ||||||||||||||| ||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcactgtttacattcatatagatgtta 64
Query: 82 atgaatcta 90
||| |||||
Sbjct: 65 atggatcta 73
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 112 gtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||| ||||| ||||||||| ||| || |||||||||||
Sbjct: 115 gtgggcaatgctagaaagtcttatattatgaagcggaggaagta 158
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||||||||||| |||||||||||| ||| |||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtta 99
Query: 82 atgaatctagac 93
|| |||||||||
Sbjct: 98 ataaatctagac 87
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | |||||| | ||||| |||| ||||||||||||| ||||||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 72 atgaatctaga 62
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||| | ||||| |||| ||||||||||||| |||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79
Query: 82 atgaatc 88
|||||||
Sbjct: 78 atgaatc 72
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| ||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 82 atgaatc 88
|||||||
Sbjct: 65 atgaatc 71
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||| | ||||| ||||||| | ||||||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 98 atgaatctaga 88
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||||| | |||| | ||||| || ||| ||||||||||| |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 77.8 bits (39), Expect = 5e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
|||||||||||||||| | | ||||| |||||| |||||||||||||||||||||||||
Sbjct: 120 tactccctccgtttcacaatgtaagagtttctagcattgcccacattcatatagatgct 62
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatg 78
|||| ||||||||||| | | |||||||||||| | |||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcgttgcccacattcatatagatg 61
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | |||||| | ||||| |||| ||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
||||||||| |||||||| | |||||||||||| ||||||||||||| ||| |||| ||
Sbjct: 5 tactccctcagtttcataatgtaagactttctagcattgcccacatttttatggatgtta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatat 73
|||| ||||| ||||||| | |||||||||||| ||||||||||||||||||
Sbjct: 130 tacttcctccatttcataatgtaagactttctagcattgcccacattcatat 79
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa
Japonica Group
Length = 118
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatataga 76
|||||||||||||||||||||||||||||| || |||| |||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttatagcattatccacattcatataga 59
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatata 74
|||| |||||||||||||||||||||||||||| |||| ||||||| |||||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattatccacatttatata 62
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 109 aatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||| ||| ||||| ||||||||||||| ||||||||||||||
Sbjct: 68 aatgtggataatgctagaaagtcttataatatgaaacggaggaagta 114
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 20 aatactccctccgtttcatattataagactttctatcattgcccacattcatatagatgc 79
|||||| ||||||||||| | | ||||||||| || | |||||||||||||| ||||||
Sbjct: 3 aatacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgt 62
Query: 80 taatgaatctagac 93
||||||||||||||
Sbjct: 63 taatgaatctagac 76
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | ||||||||||| || || | ||||||| |||| ||||| ||
Sbjct: 154 tactccctccgtttcacaatataagactttttagcactacccacatacataaagatgtta 95
Query: 82 atgaatcta 90
|||||||||
Sbjct: 94 atgaatcta 86
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||||||||||| |||||| ||||| |||||||||| ||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 82 atgaatcta 90
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||||| | |||| ||||| ||||| ||||||||||||||||| |
Sbjct: 138 atactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtt 79
Query: 81 aatgaatctagac 93
||| |||||||||
Sbjct: 78 aataaatctagac 66
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||||| | |||| ||||| ||||||||||||||| ||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagttattctagcattgcccacattcacatagatgcta 64
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||| ||||| ||||||| | |||| | ||||| |||||| |||||||||||||||| |
Sbjct: 133 atacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgtt 74
Query: 81 aatgaatctagac 93
|||||||||||||
Sbjct: 73 aatgaatctagac 61
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatata 74
||||||||||||||||||| | |||| | ||||| |||| || | |||||||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcattacctatattcatata 57
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | |||||||||||||| ||||| ||||||||| |||||| ||
Sbjct: 124 tactccctccgtttcacaatataagactttctaatattgcacacattcatttagatgtta 65
Query: 82 atgaatcta 90
|| ||||||
Sbjct: 64 ataaatcta 56
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 29 tccgtttcatattataagactttctatcattgcccacattcatatagat 77
||||||| ||| | ||||||||| || |||||||||||||||| |||||
Sbjct: 12 tccgttttataatgtaagactttttagcattgcccacattcatttagat 60
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||||||| ||| | ||||||| | ||||||||||| ||||||
Sbjct: 52 gaatgtgggcaatgctaaaaagtcttacattataaaacggatgaagta 5
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 73.8 bits (37), Expect = 7e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 29 tccgtttcatattataagactttctatcattgcccacattcatatagatgctaatgaatc 88
||||||||| | | |||||||||||| |||||||||||||||||| ||| |||||||||
Sbjct: 119 tccgtttcacaatgtaagactttctagcattgcccacattcatatggatactaatgaatt 60
Query: 89 tagac 93
|||||
Sbjct: 59 tagac 55
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 108 gaatgtgggcaatactagatagtcttataatataaaacggaggaagtatat 158
||||||||||||| ||||| ||||||| | | | ||||||| |||||||||
Sbjct: 79 gaatgtgggcaatgctagaaagtcttacattgtgaaacggatgaagtatat 129
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||| ||||||||||| | | |||||||||||| |||| |||||||||| |||||| |
Sbjct: 4 atacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgtt 63
Query: 81 aatgaatctagac 93
|||||||||||||
Sbjct: 64 aatgaatctagac 76
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
||||||||| |||||| | | |||||||||||| |||| ||||||||||| |||||| ||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 82 atgaatcta 90
|||||||||
Sbjct: 65 atgaatcta 73
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatata 74
|||||||||||||||| | | ||||||||| || |||||| ||||| ||||||
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcattgctcacatacatata 108
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||||| | |||| | ||||| |||| |||||||||||| |||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcc 63
Query: 81 aatgaatctagac 93
|||||||||||||
Sbjct: 64 aatgaatctagac 76
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||| | ||||| |||| ||||| ||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 98 atgaatctaga 88
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| |||||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 82 atgaatcta 90
|||||||||
Sbjct: 65 atgaatcta 73
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagat 77
|||||||||||||||| | | |||| | ||||| |||| |||||||||||||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagat 69
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||| | | |||||||||||||| |||||||||||| ||||||||| ||
Sbjct: 134 tactacctccgttttacaatataagactttctaacattgcccacatatatatagatgtta 75
Query: 82 atgaatcta 90
|||||||||
Sbjct: 74 atgaatcta 66
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 25 tccctccgtttcatattataagactttctatcattgcccacat 67
||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 8 tccctccgtttcataatataagactttctagcattgcccacat 50
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 110 atgtgggcaatactagatagtcttataatataaaacggagg 150
||||||||||| ||||| ||||||||| ||| |||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttatattatgaaacggagg 10
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 110 atgtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||||| |||| ||||||||| | ||||||||||| ||||
Sbjct: 89 atgtgggcaatgttagaaagtcttatattgtaaaacggaggtagta 134
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 28 ctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
|||||||||||| | |||||||||||| ||||||||| |||||||||||||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgcccatattcatatagatgct 63
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||||||||||| ||||| ||| || |||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 82 atgaatcta 90
|||||||||
Sbjct: 98 atgaatcta 90
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||||||||||| |||| ||||||||||| ||| || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 25 tccctccgtttcatattataagactttctatcattgcccacattcatatagatgctaatg 84
||||||||||||||| | |||||||||||| |||| ||| ||||||||||||| ||| |
Sbjct: 8 tccctccgtttcataatgtaagactttctagcattaaccatattcatatagatgttaacg 67
Query: 85 aatctagac 93
|||||||||
Sbjct: 68 aatctagac 76
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||||| | |||| | ||||| |||| |||||||||||| |||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcc 63
Query: 81 aatgaatctagac 93
|||||||||||||
Sbjct: 64 aatgaatctagac 76
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||| | ||||| ||| ||||| ||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 98 atgaatctaga 88
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||||| | ||||||||||| |||| ||||||||||| |||||| ||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtta 64
Query: 82 atgaatcta 90
|||||||||
Sbjct: 65 atgaatcta 73
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||||||||||| ||||||| | | | ||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcctatgtacccatagatgtta 99
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 98 atgaatctagac 87
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | |||||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 82 atgaatcta 90
|||||||||
Sbjct: 80 atgaatcta 72
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 46 gactttctatcattgcccacattcatatagatgctaatgaatctagac 93
||||||||| |||||||||||||||||| |||| ||||||||||||||
Sbjct: 112 gactttctaacattgcccacattcatatggatgttaatgaatctagac 65
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 46 gactttctatcattgcccacattcatatagatgctaatgaatctaga 92
||||||||| |||||||||||||||||| |||| |||||||||||||
Sbjct: 1 gactttctagcattgcccacattcatatggatgttaatgaatctaga 47
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | |||||||||| ||||||||||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 98 atgaatctagac 87
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||| | ||||| ||| |||| |||||||| |||||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 76 atgaatctagac 65
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | ||||||||| || ||||||||| |||||| |||||| ||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 98 atgaatctagac 87
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||||||||||| |||||| || || |||||||| | ||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 82 atgaatcta 90
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa
Indica Group
Length = 91
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccac 65
|||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 87 tacttcctccgtttcatattataagactttctagcattgcccac 44
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 112 gtgggcaatactagatagtcttataatataaaacggaggaagta 155
||||||||| ||||| ||||||||||||| ||||||||||||||
Sbjct: 44 gtgggcaatgctagaaagtcttataatatgaaacggaggaagta 87
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 20 aatactccctccgtttcatattataagactttcta 54
||||||||||| |||||| |||||||||||||||
Sbjct: 3 aatactccctctgtttcaggttataagactttcta 37
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||| | ||||| |||| ||||||||||||| |||| |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 92 atgaatctagac 81
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||| ||||||||||| | | |||| | |||||||||| ||||||||||||| ||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtc 63
Query: 81 aatgaatctagac 93
|||||||||||||
Sbjct: 64 aatgaatctagac 76
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| |||||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 98 atgaatctagac 87
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | |||||| | ||||| |||| | ||||||||||| ||| |||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatacta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||||| |||||| | ||||| |||| |||||||||||| |||| ||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 79 atgaatctagac 68
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | |||||| | ||||| |||| ||||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 98 atgaatctaga 88
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | |||||| | ||||| | || |||||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||| | ||||| |||| || |||||||||| |||| ||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 63 atgaatctaga 53
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||| | | |||| | ||||| |||| |||||||||||||||||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgct 100
Query: 81 aatgaat 87
|||||||
Sbjct: 99 aatgaat 93
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 19 taatactccctccgtttcatattataagactttctatcattgcccacattcatatagatg 78
||||||||||||||||||| | | |||| | ||||| |||| | | |||||||||||||
Sbjct: 2 taatactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatg 61
Query: 79 ctaatgaatcta 90
||||||||||||
Sbjct: 62 ctaatgaatcta 73
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||| | || || |||| ||||||||||||| |||| ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 89 atgaatctaga 79
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||| | || || |||| ||||||||||||| |||| ||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 86 atgaatctaga 76
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa
Japonica Group
Length = 160
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 20 aatactccctccgtttcatattataagactttctatcattgcccacattcatatagatgc 79
|||||| ||||||||||| | |||||| | ||||| |||| ||||| || |||| ||||
Sbjct: 158 aatacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgt 99
Query: 80 taatgaatct 89
||||||||||
Sbjct: 98 taatgaatct 89
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||| | ||||| ||| ||||||||||||| |||| ||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 82 atgaatctagac 93
|||||| |||||
Sbjct: 98 atgaatgtagac 87
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| |||||||||||||| || || ||||||||||||||||| ||
Sbjct: 139 tacttcctccgtttcaggctataagactttctagcactgtccacattcatatagatgtta 80
Query: 82 atgaatc 88
|||||||
Sbjct: 79 atgaatc 73
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatg 78
|||||||||||||||| ||||||||||||||| || || ||| |||||||||||||
Sbjct: 5 tactccctccgtttcaggttataagactttctagcactgtccatattcatatagatg 61
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 76 atgaatctaga 66
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 43 taagactttctatcattgcccacattcatatagatgctaatgaatctagac 93
|||||||||||| ||| |||||||||||||||||| ||||||||||||||
Sbjct: 2 taagactttctagcatcacccacattcatatagatgttaatgaatctagac 52
Score = 54.0 bits (27), Expect = 7e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 43 taagactttctatcattgcccacattcatatagatgctaatgaatctagac 93
|||||||||||| ||| | |||||||||||||||| |||||||||||||
Sbjct: 113 taagactttctagcatcacacacattcatatagatgtaaatgaatctagac 63
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 20 aatactccctccgtttcatattataagactttctatcattgcccacattcatatagatgc 79
|||||||||||||||||| | | |||||| ||||| ||| ||||||||||||| |||
Sbjct: 160 aatactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatat 101
Query: 80 taatgaatctagac 93
||||||||||||||
Sbjct: 100 taatgaatctagac 87
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||| | | ||||| |||||| |||||||||||| | ||||||| |
Sbjct: 4 atactccctccgtttcacaatgtaagattttctagcattgcccacatatacatagatgtt 63
Query: 81 aatgaatcta 90
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatg 78
|||| |||||||| || | |||||||||||||| |||| | ||||||||| ||||||
Sbjct: 138 tacttcctccgttccacaatataagactttctagcattactcacattcatttagatg 82
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 50 ttctatcattgcccacattcatatagatgctaatgaatctag 91
||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 33 ttctagcattgtccacattcatatagatgctaatgaatctag 74
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| |||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 98 atgaatctagac 87
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa
Japonica Group
Length = 155
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||| | |||||| | |||||| ||| ||||||||||||| |||| |
Sbjct: 4 atactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtt 63
Query: 81 aatgaa 86
||||||
Sbjct: 64 aatgaa 69
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 82 atgaatcta 90
|||||||||
Sbjct: 97 atgaatcta 89
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 82 atgaatctag 91
||||||||||
Sbjct: 65 atgaatctag 74
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | |||||| | ||||| |||| |||||||||||| |||| ||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 82 atgaatcta 90
|||||||||
Sbjct: 80 atgaatcta 72
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 20 aatactccctccgtttcatattataagactttctatcattgcccacattcatatagatgc 79
|||||| ||||||||||||| | |||| | ||||| |||| ||||||||||||| |||
Sbjct: 117 aatacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatat 58
Query: 80 taatgaatctaga 92
|||||||||||||
Sbjct: 57 taatgaatctaga 45
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 20 aatactccctccgtttcatattataagactttctatcattgcccacattcatatagatgc 79
|||||| ||||||||||||| | |||| | ||||| |||| |||| |||||||| ||||
Sbjct: 142 aatacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgt 83
Query: 80 taatgaatctaga 92
|||||||||||||
Sbjct: 82 taatgaatctaga 70
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| |||| |||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| |||| |||||||| |||| ||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 79 atgaatctagac 68
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||||| | |||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 82 atgaatctagac 93
||| ||||||||
Sbjct: 69 atggatctagac 58
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||| |||| |||||||| |||||| | ||||| |||| ||||||||||| ||||||
Sbjct: 4 atacttcctctgtttcataatataagtcattctagcattttccacattcatactgatgct 63
Query: 81 aatgaatctaga 92
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatg 78
|||||||||||||||||| | |||| | || || |||| ||||||||||||| ||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatg 82
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 63.9 bits (32), Expect = 7e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | |||||| | ||||| |||| | ||||||||||| |||||||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgcta 76
Query: 82 atgaatct 89
||||||||
Sbjct: 75 atgaatct 68
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||| | | |||| | ||||| |||| ||||||||||||| | || |
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtt 63
Query: 81 aatgaatctaga 92
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||| ||||||||||| | |||| | ||| | |||| ||||||||||||| |||| ||
Sbjct: 158 tactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgatggta 99
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 98 atgaatctagac 87
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | |||||| | ||||| |||| | | |||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 98 atgaatctagac 87
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||| | |||||| | || || |||| ||||||| |||| ||||||
Sbjct: 153 atactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgct 94
Query: 81 aatgaatctaga 92
||||||||||||
Sbjct: 93 aatgaatctaga 82
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| |||||||||||||| || ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 98 atgaatctagac 87
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||| |||||| |||| | |||| | ||||| |||| ||||||||||||||| || ||
Sbjct: 5 tactccttccgttccataatgtaagtcattctaacatttcccacattcatataggtgtta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||| | ||| | |||| ||||||||||||| ||||| |
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcca 96
Query: 82 atgaatctagac 93
||| ||||||||
Sbjct: 95 atggatctagac 84
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | |||||| | ||||| ||| ||||||||||||| ||| |||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| ||||||||||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| |||| |||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa
Indica Group
Length = 140
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||| | ||||| |||||||| || ||||||||| ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagat 77
|||| ||||||||||||| | |||| | ||||| ||||| | ||||||||||||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctagcattgtctacattcatatagat 81
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| |||||||||||| |||| ||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 102 atgaatctagac 91
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | |||||| | || || |||| |||| |||||||| |||| ||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 89 atgaatctagac 78
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||| | ||||| |||| | || |||||||| |||| ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
||||||||||||| || | | |||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 96 atgaatctagac 85
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| |||||||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| |||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 82 atgaatcta 90
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | || || |||| ||||||||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | |||||| | || || |||| ||||||||||||| ||| ||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 98 atgaatctaga 88
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 23 actccctccgtttcatattataagactttctatcattgcccacattcatatagatgctaa 82
||||||||||||||||| | |||| | ||||| |||| ||||||||||||| || | ||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 83 tgaatctagac 93
|||||||||||
Sbjct: 97 tgaatctagac 87
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||| | ||||| |||| || | ||||||||||| | ||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 82 atgaatcta 90
||||||||
Sbjct: 65 gtgaatcta 73
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||| | | |||| | |||||||||| ||| ||||||| ||||||
Sbjct: 132 atactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgct 73
Query: 81 aatgaatctag 91
|||||||||||
Sbjct: 72 aatgaatctag 62
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 18 ataatactccctccgtttcatattataagactttctatcattgcccacattcatat 73
|||||| ||||||||||||| | |||||| | |||||||||| | || ||||||||
Sbjct: 1 ataatagtccctccgtttcacaatataagtcattctatcatttctcaaattcatat 56
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 98 atgaatctaga 88
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| ||| |||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 82 atgaatcta 90
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| |||||||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | |||||| | ||||| |||| | ||||||||||| |||| ||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 67 atgaatctaga 57
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||||| | |||| | |||||||||| ||||||||||| |||| ||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtta 71
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 70 atgaatctaga 60
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatat 73
|||||||||||||||| | |||||| | ||||| |||| |||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||| | || || |||| ||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 64
Query: 82 atgaatctag 91
||||||||||
Sbjct: 65 atgaatctag 74
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||| ||||||||||| | | |||||||||||| ||||| |||||||||| |||||| |
Sbjct: 140 atacttcctccgtttcacaatgtaagactttctagcattg-ccacattcatttagatgtt 82
Query: 81 aatgaatcta 90
| ||||||||
Sbjct: 81 attgaatcta 72
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatg 78
||||| ||||||||||| | | |||| ||||||| ||||| |||||| | ||||||||
Sbjct: 4 atacttcctccgtttcacaatctaagcctttctagcattggccacatacgtatagatg 61
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 44 aagactttctatcattgcccacattcatatagatgctaatgaatctagac 93
||||||||| | ||||||||||||||| ||||| | ||||||||||||||
Sbjct: 141 aagactttccagcattgcccacattcacatagaagttaatgaatctagac 92
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 56 cattgcccacattcatatagatgctaatgaatctagac 93
||||||||||||||| ||||| | ||||||||||||||
Sbjct: 13 cattgcccacattcacatagaagttaatgaatctagac 50
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 43 taagactttctatcattgcccacattcatat 73
|||||||||| | ||||||||||||||||||
Sbjct: 81 taagactttccagcattgcccacattcatat 51
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| |||| |||||| | | |||||||||||| | |||||||||||||||||||| ||
Sbjct: 114 tacttcctctgtttcacaatgtaagactttctagcgttgcccacattcatatagatatta 55
Query: 82 atgaat 87
||||||
Sbjct: 54 atgaat 49
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||| | || || |||| ||||||||||||| |||||||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 84
Query: 82 atgaatctag 91
||||||||||
Sbjct: 83 atgaatctag 74
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 56 cattgcccacattcatatagatgctaatgaatctagac 93
||||||||||||||||||| ||| ||||||||||||||
Sbjct: 5 cattgcccacattcatatatatgttaatgaatctagac 42
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 56 cattgcccacattcatatagatgctaatgaatctaga 92
||||||||||||||||||| ||| |||||||||||||
Sbjct: 86 cattgcccacattcatatatatgttaatgaatctaga 50
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||||| | |||| | ||||| |||| |||||||||||| |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 82 atgaatcta 90
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 41 tataagactttctatcattgcccacattcatatagatgctaatgaatctagac 93
|||||| | ||||| |||| | ||||||||||| |||||||||||||||||||
Sbjct: 106 tataagtcattctagcatttctcacattcatattgatgctaatgaatctagac 54
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 50 ttctatcattgcccacattcatatagatgctaatgaat 87
||||| |||| | ||||||||||| |||||||||||||
Sbjct: 12 ttctagcatttctcacattcatattgatgctaatgaat 49
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||||| | |||| | ||||| |||| |||||||||||| |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 82 atgaatcta 90
|||||||||
Sbjct: 65 atgaatcta 73
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
||||||||| |||||| | | |||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 82 atgaatctagac 93
||||| ||||||
Sbjct: 86 atgaaactagac 75
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||| ||||||||||| | | |||| | ||||| |||| ||||||||||||| ||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtc 63
Query: 81 aatgaatctagac 93
|||||||||||||
Sbjct: 64 aatgaatctagac 76
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatg 78
|||||||||||||||||| | |||| | ||||| |||| ||||||||||||| ||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatg 79
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
||||||||||||| || | |||||| | ||||| |||| | || |||||||| |||||||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 82 atgaatcta 90
|||||||||
Sbjct: 98 atgaatcta 90
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||| | | |||| | ||||| ||| |||||||||||| |||| |
Sbjct: 158 atactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtt 99
Query: 81 aatgaatctagac 93
|||||||||||||
Sbjct: 98 aatgaatctagac 86
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
||||| |||||||||| | | |||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 5 tactctctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 64
Query: 82 atgaatcta 90
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | |||||| | ||||| ||| ||||||||||||| |||| ||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 73
Query: 82 atgaatcta 90
|||||||||
Sbjct: 72 atgaatcta 64
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa Japonica
Group
Length = 109
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 116 gcaatactagatagtcttataatataaaacggaggaagtat 156
||||| ||||| ||||||||| |||||||||||||||||||
Sbjct: 44 gcaatgctagaaagtcttatattataaaacggaggaagtat 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatata 74
|||| ||||||| ||||| |||||||||||||| ||||| ||| |||||||||
Sbjct: 105 tacttcctccgtctcataatataagactttctagcattgtccatattcatata 53
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgc 61
||||| ||||||||| ||| |||||||||||||| ||||||
Sbjct: 4 atacttcctccgttttataatataagactttctagcattgc 44
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||| ||||||||||||| | |||| | ||||| ||| | ||||||||||| |||| |
Sbjct: 4 atacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtt 63
Query: 81 aatgaatctagac 93
|||||||||||||
Sbjct: 64 aatgaatctagac 76
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
||||||||| |||||| | | |||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 82 atgaatcta 90
|||||||||
Sbjct: 70 atgaatcta 62
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||| | |||||| | ||||| |||| |||||| |||| |||| |
Sbjct: 159 atactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgat 100
Query: 81 aatgaatctagac 93
|||||||||||||
Sbjct: 99 aatgaatctagac 87
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | |||||| | || || |||| ||||||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatg 78
|||||||||||||| | | | |||||||||||| |||||| || |||||||||||||
Sbjct: 108 tactccctccgttttacaatgtaagactttctagcattgctcatattcatatagatg 52
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatat 73
||||||||||||||||| | |||||| | ||||| |||| |||||||||||||
Sbjct: 4 atactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||| | | |||| | ||||| ||| ||||||||||||| | || |
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtt 100
Query: 81 aatgaatctagac 93
|||||||||||||
Sbjct: 99 aatgaatctagac 87
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||| | ||||| |||| |||||| ||||| |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa
Japonica Group
Length = 138
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatata 74
|||||||||||||||||| | |||| | |||||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatata 57
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| ||| |||||||| |||| ||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 85 atgaatctagac 74
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||| | | |||| ||||| |||| ||||||||||| ||||||
Sbjct: 4 atactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgct 63
Query: 81 aatgaatctaga 92
||||||||||||
Sbjct: 64 aatgaatctaga 75
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||| | |||| |||| |||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggta 64
Query: 82 atgaatct 89
||||||||
Sbjct: 65 atgaatct 72
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | |||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 137 tactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtta 78
Query: 82 at 83
||
Sbjct: 77 at 76
>RF00906;MIR1122;AAAA02018216.1/16118-16192 39946:Oryza sativa
Indica Group
Length = 75
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagact 49
||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagact 32
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataaga 47
||||||||||||||||||||||||||
Sbjct: 71 tactccctccgtttcatattataaga 46
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | || || |||| | ||||| ||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 98 atgaatctagac 87
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa
Indica Group
Length = 150
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||| | | |||| | ||||| |||| |||||||||||| |||| |
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 81 aatgaatctaga 92
|||| |||||||
Sbjct: 64 aatgtatctaga 75
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||| |||||||| || | | |||| | ||||| |||| ||||||||||||| |||| |
Sbjct: 147 atacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtt 88
Query: 81 aatgaatcta 90
|||| |||||
Sbjct: 87 aatgtatcta 78
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| |||||||| |||| | || ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 65 atgaatctagac 76
>RF00906;MIR1122;AAAA02021108.1/39171-39038 39946:Oryza sativa
Indica Group
Length = 134
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 45 agactttctatcattgcccacattcatatagatgctaatg 84
|||||||| | ||||||||| |||||||||||||||||||
Sbjct: 57 agactttcaagcattgcccatattcatatagatgctaatg 96
Score = 54.0 bits (27), Expect = 7e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatataga 76
|||| |||| |||||||| |||||||||||| | |||||| || |||||||||||
Sbjct: 5 tacttcctctgtttcatactataagactttcaagcattgcacatattcatataga 59
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttc 52
|||||||||||||||||| ||||||||||||
Sbjct: 130 tactccctccgtttcatactataagactttc 100
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 50 ttctatcattgcccacattcatatagatgctaatgaatctagac 93
||||| |||| ||||||||||||| |||| ||||||||||||||
Sbjct: 104 ttctagcatttcccacattcatattgatgttaatgaatctagac 61
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 50 ttctatcattgcccacattcatatagatgctaatgaatctaga 92
||||| |||| | ||||||||||| |||| |||||||||||||
Sbjct: 7 ttctagcatttctcacattcatattgatgttaatgaatctaga 49
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| | ||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 98 atgaatctagac 87
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||| | ||||| |||| |||| |||||||| |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtta 64
Query: 82 atgaatctag 91
||||||||||
Sbjct: 65 atgaatctag 74
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa
Japonica Group
Length = 137
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 46 gactttctatcattgcccacattcatatagatgctaatgaatctagac 93
||||||| | ||||||||||||||| ||||| | ||||||||||||||
Sbjct: 1 gactttccagcattgcccacattcacatagaagttaatgaatctagac 48
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 56 cattgcccacattcatatagatgctaatgaatctagac 93
||||||||||||||| ||||| | ||||||||||||||
Sbjct: 127 cattgcccacattcacatagaagttaatgaatctagac 90
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 43 taagactttctatcattgcccacattcatat 73
|||||||||| | ||||||||||||||||||
Sbjct: 59 taagactttccagcattgcccacattcatat 89
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||| | |||| |||| |||||||| |||| ||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 96 atgaatctagac 85
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| |||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 98 atgaatctagac 87
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 50 ttctatcattgcccacattcatatagatgctaatgaatctagac 93
||||| |||| ||||||||||||| |||| ||||||||||||||
Sbjct: 7 ttctagcatttcccacattcatattgatgttaatgaatctagac 50
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 50 ttctatcattgcccacattcatatagatgctaatgaatcta 90
||||| |||| ||||||||||||| |||| |||||||||||
Sbjct: 104 ttctagcatttcccacattcatattgatgttaatgaatcta 64
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 54.0 bits (27), Expect = 7e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 82 atgaatc 88
|||||||
Sbjct: 65 atgaatc 71
Score = 46.1 bits (23), Expect = 2e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | ||| | ||||| |||| | ||||||||||| |||| ||
Sbjct: 141 tactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgtta 82
Query: 82 atgaatc 88
|||||||
Sbjct: 81 atgaatc 75
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||| ||| | | |||| | ||||| |||| ||||||||||||| ||| ||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 98 atgaatctaga 88
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 56 cattgcccacattcatatagatgctaatgaatctagac 93
|||| |||||||| |||| |||| ||||||||||||||
Sbjct: 39 catttcccacatttatattgatgttaatgaatctagac 76
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||| | ||||| |||| ||||||||||||| || | ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | || || ||| |||||||| |||| |||| ||
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 98 atgaatctaga 88
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa
Indica Group
Length = 162
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||| ||||||||| | | |||| | ||||| |||| | ||||||||||| |||| ||
Sbjct: 5 tactccttccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgtta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 50 ttctatcattgcccacattcatatagatgctaatgaatc 88
||||| |||| ||||||||||||| ||||||||||||||
Sbjct: 7 ttctagcatttcccacattcatattgatgctaatgaatc 45
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 50 ttctatcattgcccacattcatatagatgctaatgaatc 88
||||| |||| ||||||||||||| ||||||||||||||
Sbjct: 84 ttctagcatttcccacattcatattgatgctaatgaatc 46
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 50 ttctatcattgcccacattcatatagatgctaatgaatctaga 92
||||| |||| ||||||||||||||| || |||||||||||||
Sbjct: 100 ttctaacatttcccacattcatataggtgttaatgaatctaga 58
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 62 ccacattcatatagatgctaatgaatctagac 93
|||||||||||||| || ||||||||||||||
Sbjct: 15 ccacattcatataggtgttaatgaatctagac 46
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 54.0 bits (27), Expect = 7e-07
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 19 taatactccctccgtttcatattataagactttctatcattgcccacattcatatagatg 78
|||||||||||||||| || | | |||| | || || |||| |||| ||| |||| ||||
Sbjct: 2 taatactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatg 61
Query: 79 ctaatgaatctagac 93
|||||||||||||||
Sbjct: 62 ctaatgaatctagac 76
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatg 78
|||| ||||||||||| | | |||||| ||||| |||| ||||||||||||| ||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatg 76
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| | ||||||||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 51 tctatcattgcccacattcatatagatgctaatgaatctaga 92
|||| |||| ||||||||||||| |||| |||||||||||||
Sbjct: 35 tctaacatttcccacattcatattgatgttaatgaatctaga 76
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 56 cattgcccacattcatatagatgctaatgaatctagac 93
|||| ||||||||||||| |||||||||||| ||||||
Sbjct: 5 catttcccacattcatattgatgctaatgaaactagac 42
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 56 cattgcccacattcatatagatgctaatgaatctagac 93
|||| ||||||||||||| ||||||||| |||||||||
Sbjct: 112 catttcccacattcatattgatgctaataaatctagac 75
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 52 ctatcattgcccacattcatatagatgctaatgaatctagac 93
|||||||| ||||||||||||| |||| |||||||||||||
Sbjct: 1 ctatcatttcccacattcatattgatgtcaatgaatctagac 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 56 cattgcccacattcatatagatgctaatgaatctagac 93
|||| ||||||||||||| |||| |||||||||||||
Sbjct: 84 catttcccacattcatattgatgtcaatgaatctagac 47
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 20 aatactccctccgtttcatattataagactttctatcattgcccacattcatat 73
|||||| ||||||||||| | |||||| | ||||| |||| |||||||||||||
Sbjct: 138 aatacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 85
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa
Japonica Group
Length = 148
Score = 52.0 bits (26), Expect = 3e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| ||||||||||||| |||| |
Sbjct: 5 tactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgttc 64
Query: 82 atgaat 87
||||||
Sbjct: 65 atgaat 70
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||| | ||||| |||| ||||||||||||| |||| |
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttc 85
Query: 82 atgaatctagac 93
|| |||||||||
Sbjct: 84 ataaatctagac 73
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||||| | |||| | ||||| |||| | || ||| ||||||||| |
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtt 63
Query: 81 aatgaatcta 90
| ||||||||
Sbjct: 64 agtgaatcta 73
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 20 aatactccctccgtttcatattataagactttctatcattgcccacattcatat 73
|||||| ||||||||||| | |||||| | ||||| |||| |||||||||||||
Sbjct: 138 aatacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 85
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 52.0 bits (26), Expect = 3e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
||||||| |||||||| | | |||| | ||||| |||| ||||||||||||| |||| ||
Sbjct: 148 tactccccccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 89
Query: 82 atgaat 87
||||||
Sbjct: 88 atgaat 83
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||| ||||||||||| | | |||| | ||||| |||| |||||||| |||| ||| |
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtt 63
Query: 81 aatgaatctagac 93
|||||||||||||
Sbjct: 64 aatgaatctagac 76
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||| | |||||| | || || |||| |||||||||||| ||||||
Sbjct: 140 atactccctccgtttcacaatataagtcattttagcattttccacattcatattgatgct 81
Query: 81 a 81
|
Sbjct: 80 a 80
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | |||| | ||||| |||| | || |||||||| ||| ||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 82 atgaatcta 90
|||||||||
Sbjct: 66 atgaatcta 58
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||||| | ||| | || || |||| |||||||||||||||| ||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtta 97
Query: 82 atgaatcta 90
|||||||||
Sbjct: 96 atgaatcta 88
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||| | || || |||| ||||||||||| |||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 82 atgaatctagac 93
||||||| ||||
Sbjct: 65 atgaatcaagac 76
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 50.1 bits (25), Expect = 1e-05
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 25 tccctccgtttcatattataagactttctatcattgcccacattcatatagatgctaatg 84
||||||||||||| | | |||| ||||||| |||| ||||||| || |||||| |||||
Sbjct: 115 tccctccgtttcacaatgtaaggctttctagtattgtccacatttatttagatgttaatg 56
Query: 85 aatct 89
|||||
Sbjct: 55 aatct 51
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 25 tccctccgtttcatattataagactttctatcattgcccacattcatatagatgctaatg 84
||||||||||||| | | |||| | ||||| |||| | ||||||||||| |||| ||||
Sbjct: 155 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatg 96
Query: 85 aatctagac 93
|||||||||
Sbjct: 95 aatctagac 87
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||| ||||||||||| | | |||| | ||||| |||| ||||||||||||| | ||
Sbjct: 131 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtact 72
Query: 81 aatgaatctagac 93
|||||||||||||
Sbjct: 71 aatgaatctagac 59
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||| ||||||||||| | | |||| | ||||| |||| ||||||||||||| || |
Sbjct: 136 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatt 77
Query: 81 aatgaatctagac 93
|||||||||||||
Sbjct: 76 aatgaatctagac 64
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 20 aatactccctccgtttcatattataagactttctatcattgcccacattcatat 73
|||||||||||| ||||| | | |||| | ||||| |||| |||||||||||||
Sbjct: 3 aatactccctccatttcacaatgtaagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatg 78
|||||||||||||||| | | |||| | ||||| |||| ||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatg 61
Score = 50.1 bits (25), Expect = 1e-05
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||| ||||||||||| | | |||| | ||||| |||| ||||||||||||| |||| |
Sbjct: 131 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtt 72
Query: 81 aatga 85
|||||
Sbjct: 71 aatga 67
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa
Indica Group
Length = 142
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatg 78
|||||||||||||||||| | |||| | ||||| |||| | ||||||||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacatttctcacattcatatggatg 61
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||| ||| | |||| | ||||| |||| |||||||| ||| |||| ||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgtta 79
Query: 82 atgaatctagac 93
|||||||||||
Sbjct: 78 gtgaatctagac 67
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatataga 76
||||||||||||||||||| | ||||||||| || ||| | ||| ||| |||||||
Sbjct: 4 atactccctccgtttcataatgtaagactttttagcatcgtccatatttatataga 59
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa
Indica Group
Length = 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| |||||||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 82 atga 85
||||
Sbjct: 65 atga 68
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 29 tccgtttcatattataagactttctatcattgcccacattcatatagatgctaatgaatc 88
||||||||| | | |||| | ||||| |||| | ||||||||||| |||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 89 taga 92
||||
Sbjct: 72 taga 75
>RF00906;MIR1122;AAAA02021964.1/45093-44977 39946:Oryza sativa
Indica Group
Length = 117
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatataga 76
||||||||||||||||| | ||||||||||| || ||| | ||| ||| |||||||
Sbjct: 4 atactccctccgtttcacaatataagactttttagcatcgtccatatttatataga 59
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 29 tccgtttcatattataagactttctatcattgcccacattcatatagatgctaatgaatc 88
||||||||| | | |||| | ||||| |||| | ||||||||||| |||| |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 89 taga 92
||||
Sbjct: 72 taga 75
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatat 73
|||| ||||||||||| | |||||| | ||||| |||| |||||||||||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 68
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 48.1 bits (24), Expect = 4e-05
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | |||||| | ||||| |||| |||||||||| || ||| ||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatta 76
Query: 82 atgaatct 89
||||||||
Sbjct: 75 atgaatct 68
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||| |||||||||| | | |||| | ||||| |||| | ||||||||||| |||| |
Sbjct: 4 atacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggt 63
Query: 81 aatgaatctaga 92
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| |||| ||| |||| ||| ||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 97 atgaatctaga 87
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgc 61
|||||||||||||||||| | |||| ||||||| ||||||
Sbjct: 83 tactccctccgtttcataatgtaagtctttctagcattgc 44
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 56 cattgcccacattcatatagatgctaatgaat 87
|||| ||||||||||||| |||||||||||||
Sbjct: 80 catttcccacattcatattgatgctaatgaat 49
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | || || ||| | ||||||||||| |||| ||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtta 88
Query: 82 atgaatctagac 93
||||||||||||
Sbjct: 87 atgaatctagac 76
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatat 73
|||| ||||||||||| | |||||| | ||||| |||| |||||||||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 63
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatataga 76
|||||||||||||||||| | ||| ||||| || |||||| || || ||||||||
Sbjct: 5 tactccctccgtttcataatgtaatactttatagcattgctcatatacatataga 59
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||||| || || |||||| || || |||||||||| ||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 78
Query: 82 atgaat 87
||||||
Sbjct: 77 atgaat 72
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 46.1 bits (23), Expect = 2e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
|||||||||||||||| | | |||| | ||||| |||| ||||| ||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgatgct 63
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa
Indica Group
Length = 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 62 ccacattcatatagatgctaatgaatctaga 92
|||||||||||| |||| |||||||||||||
Sbjct: 90 ccacattcatattgatgttaatgaatctaga 60
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcatt 59
||||||||||||||||||| |||||| | ||||| ||||
Sbjct: 4 atactccctccgtttcataatataagtcattctagcatt 42
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 50 ttctatcattgcccacattcatatagatgctaatgaatctaga 92
||||| |||| ||||||||||||| |||| ||||| |||||||
Sbjct: 7 ttctagcatttcccacattcatattgatgttaatgtatctaga 49
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 50 ttctatcattgcccacattcatatagatgctaatgaatctaga 92
||||| |||| ||||||||||||| |||| ||||| |||||||
Sbjct: 117 ttctagcatttcccacattcatattgatgttaatgtatctaga 75
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatataga 76
|||||||||||||||||| | ||| ||||| || |||||| || || ||||||||
Sbjct: 137 tactccctccgtttcataatgtaatactttatagcattgctcatatacatataga 83
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||||| || || |||||| || || |||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 64
Query: 82 atgaat 87
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
||||||||| |||||||| | |||| | ||||| ||| |||||||||||| |||| ||
Sbjct: 144 tactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtta 85
Query: 82 atgaatctaga 92
|| ||||||||
Sbjct: 84 ataaatctaga 74
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | ||| | ||||| |||| | |||||||||| |||||||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 82 atgaatctaga 92
|||||| ||||
Sbjct: 86 atgaatttaga 76
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||| | ||||| |||| || | |||||||| |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||| | || || |||| ||||||||||||| |||| ||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75
Query: 82 atgaatc 88
|||||||
Sbjct: 74 atgaatc 68
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||||||||||||||| | | |||| | ||||| |||| | | |||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64
Query: 82 atgaatctaga 92
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;EU730898.1/54746-54622 15368:Brachypodium
distachyon
Length = 125
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 ataatactccctccgtttcata 39
||||||||||||||||||||||
Sbjct: 1 ataatactccctccgtttcata 22
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacat 67
|||||||||||||||||| | |||| | ||||| |||| |||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcatttcccacat 83
>RF00906;MIR1122;AC124836.2/101751-101630 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataag 46
||||||||||||| ||||||||||||
Sbjct: 4 atactccctccgtctcatattataag 29
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataag 46
|||||||||||||| |||||||||||
Sbjct: 119 atactccctccgttccatattataag 94
>RF00906;MIR1122;AAAA02017235.1/6832-6953 39946:Oryza sativa
Indica Group
Length = 122
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataag 46
|||||||||||||| |||||||||||
Sbjct: 4 atactccctccgttccatattataag 29
>RF00906;MIR1122;AACV01025230.1/832-919 39947:Oryza sativa
Japonica Group
Length = 88
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataaga 47
|||||||||||||||| |||||||||
Sbjct: 84 tactccctccgtttcagattataaga 59
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcat 71
|||||||||||||||| | | |||| | ||||| |||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 81
|||| ||||||||||| | | |||| | ||||| |||| || |||||||||| |||| ||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55
Query: 82 atgaat 87
||||||
Sbjct: 54 atgaat 49
>RF00906;MIR1122;AP005912.3/116369-116237 39947:Oryza sativa
Japonica Group
Length = 133
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataag 46
||||||||||||| ||||||||||||
Sbjct: 130 atactccctccgtctcatattataag 105
>RF00906;MIR1122;AP008208.1/30605453-30605313 39947:Oryza sativa
Japonica Group
Length = 141
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 tactccctccgtttcatattataaga 47
|||||||||||||||||| |||||||
Sbjct: 137 tactccctccgtttcataatataaga 112
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatatagatgct 80
||||||||||||||||| | | |||| | ||||| |||| |||||||| ||| |||| |
Sbjct: 122 atactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtt 63
Query: 81 aatgaa 86
||||||
Sbjct: 62 aatgaa 57
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 21 atactccctccgtttcatattataagactttctatcattgcccacattcatata 74
||||||||||||||||| | | |||| | ||||| |||| |||||||| |||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagcatttcccacatttatata 57
>RF00756;mir-299;AP008215.1/6009697-6009759 39947:Oryza sativa
Japonica Group
Length = 63
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 61 cccacattcatatagatgctaatgaatcta 90
||||||| |||||||||| |||||||||||
Sbjct: 1 cccacatacatatagatgttaatgaatcta 30
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 61 cccacattcatatagatgctaatgaatcta 90
||||||| |||||||||| |||||||||||
Sbjct: 63 cccacatacatatagatgttaatgaatcta 34
