miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46603_miR806:micropc
          Length = 188

 Score =  153 bits (77), Expect = 8e-38
 Identities = 142/166 (85%)
 Strand = Plus / Plus

                                                                       
Query: 63  tgtttgaccattcgttttattcaaaaaatttaaataattatttattcttttcatatcatt 122
           ||||||||| ||||| ||||||||||||||||| |||||||| ||||||||| |||||||
Sbjct: 23  tgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatt 82

                                                                       
Query: 123 tgattcattgttaaatatactttcatatgcacatatagttttacatatttcacaannnnn 182
           ||||||||||||||||||| ||||||     |||||| |||||||||||||||||     
Sbjct: 83  tgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtt 142

                                                         
Query: 183 nnagaataagactaacggtcaaacatgtgctaaaaagtcaacggtg 228
              ||||||||  |||||| ||| ||||||||||||||||||||||
Sbjct: 143 tttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtg 188



 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 39/42 (92%), Gaps = 1/42 (2%)
 Strand = Plus / Minus

                                                     
Query: 186 gaataagactaacggtcaaacatgtgc-taaaaagtcaacgg 226
           ||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 44  gaataagacgaacggtcaaacatgtgcttaaaatgtcaacgg 3




>46529_miR806:micropc
          Length = 188

 Score =  153 bits (77), Expect = 8e-38
 Identities = 142/166 (85%)
 Strand = Plus / Plus

                                                                       
Query: 63  tgtttgaccattcgttttattcaaaaaatttaaataattatttattcttttcatatcatt 122
           ||||||||| ||||| ||||||||||||||||| |||||||| ||||||||| |||||||
Sbjct: 23  tgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatt 82

                                                                       
Query: 123 tgattcattgttaaatatactttcatatgcacatatagttttacatatttcacaannnnn 182
           ||||||||||||||||||| ||||||     |||||| |||||||||||||||||     
Sbjct: 83  tgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtt 142

                                                         
Query: 183 nnagaataagactaacggtcaaacatgtgctaaaaagtcaacggtg 228
              ||||||||  |||||| ||| ||||||||||||||||||||||
Sbjct: 143 tttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtg 188



 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 39/42 (92%), Gaps = 1/42 (2%)
 Strand = Plus / Minus

                                                     
Query: 186 gaataagactaacggtcaaacatgtgc-taaaaagtcaacgg 226
           ||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 44  gaataagacgaacggtcaaacatgtgcttaaaatgtcaacgg 3




>45954_miR806:micropc
          Length = 188

 Score =  153 bits (77), Expect = 8e-38
 Identities = 142/166 (85%)
 Strand = Plus / Plus

                                                                       
Query: 63  tgtttgaccattcgttttattcaaaaaatttaaataattatttattcttttcatatcatt 122
           ||||||||| ||||| ||||||||||||||||| |||||||| ||||||||| |||||||
Sbjct: 23  tgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatt 82

                                                                       
Query: 123 tgattcattgttaaatatactttcatatgcacatatagttttacatatttcacaannnnn 182
           ||||||||||||||||||| ||||||     |||||| |||||||||||||||||     
Sbjct: 83  tgattcattgttaaatatattttcatgcaggcatataattttacatatttcacaaaagtt 142

                                                         
Query: 183 nnagaataagactaacggtcaaacatgtgctaaaaagtcaacggtg 228
              ||||||||  |||||| ||| ||||||||||||||||||||||
Sbjct: 143 tttgaataagatgaacggttaaatatgtgctaaaaagtcaacggtg 188



 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 39/42 (92%), Gaps = 1/42 (2%)
 Strand = Plus / Minus

                                                     
Query: 186 gaataagactaacggtcaaacatgtgc-taaaaagtcaacgg 226
           ||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 44  gaataagacgaacggtcaaacatgtgcttaaaatgtcaacgg 3




>46748_miR806:micropc
          Length = 187

 Score =  115 bits (58), Expect = 2e-26
 Identities = 129/155 (83%)
 Strand = Plus / Minus

                                                                       
Query: 63  tgtttgaccattcgttttattcaaaaaatttaaataattatttattcttttcatatcatt 122
           |||||||||  |||| ||||||||||||||||||||||||||  || ||||| ||| |||
Sbjct: 166 tgtttgaccgctcgtcttattcaaaaaatttaaataattattattttttttcctataatt 107

                                                                       
Query: 123 tgattcattgttaaatatactttcatatgcacatatagttttacatatttcacaannnnn 182
           ||||||||||||||||||||||| ||    || ||||||||||||||||| ||||     
Sbjct: 106 tgattcattgttaaatatacttttatgcatacgtatagttttacatattttacaaaagtt 47

                                              
Query: 183 nnagaataagactaacggtcaaacatgtgctaaaa 217
              ||||||||  |||||||||||||||| |||||
Sbjct: 46  tttgaataagatgaacggtcaaacatgtgttaaaa 12



 Score = 61.9 bits (31), Expect = 2e-10
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 186 gaataagactaacggtcaaacatgtgctaaaaagtcaacggtg 228
           ||||||||| | |||||||||||||||||||||||||| ||||
Sbjct: 145 gaataagacgagcggtcaaacatgtgctaaaaagtcaatggtg 187




>46381_miR1884:micropc
          Length = 204

 Score = 40.1 bits (20), Expect = 9e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 65  tttgaccattcgttttattcaaaa 88
           ||||||||||||| ||||||||||
Sbjct: 172 tttgaccattcgtcttattcaaaa 149