miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42210_osa-MIR1428f:mirbase
Length = 109
Score = 216 bits (109), Expect = 3e-57
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 1 tgctttgcgaattcacaggccctatcttgtggtatgaactaagtacgcgatgatttctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgctttgcgaattcacaggccctatcttgtggtatgaactaagtacgcgatgatttctgg 60
Query: 61 tacgtattgggggcttaccataagataatgccgtgaattcgtaaagcgt 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacgtattgggggcttaccataagataatgccgtgaattcgtaaagcgt 109
>42207_osa-MIR1428d:mirbase
Length = 124
Score = 151 bits (76), Expect = 1e-37
Identities = 97/104 (93%)
Strand = Plus / Plus
Query: 3 ctttgcgaattcacaggccctatcttgtggtatgaactaagtacgcgatgatttctggta 62
||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||
Sbjct: 11 ctttgcgaattcacaggccctatattgtggtatgaactgagtacgcgatgatttatggtg 70
Query: 63 cgtattgggggcttaccataagataatgccgtgaattcgtaaag 106
| |||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 71 catattgggggcttaccataagataatgccatgaattcgcaaag 114
>42211_osa-MIR1428g:mirbase
Length = 109
Score = 141 bits (71), Expect = 1e-34
Identities = 98/107 (91%)
Strand = Plus / Plus
Query: 2 gctttgcgaattcacaggccctatcttgtggtatgaactaagtacgcgatgatttctggt 61
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 2 gctttgcgaattcacaggccctatcttgtggtatgaactgagtacgcgatgatttatggc 61
Query: 62 acgtattgggggcttaccataagataatgccgtgaattcgtaaagcg 108
| |||||||||||||||| |||||||||| ||||||| | ||||||
Sbjct: 62 gcatattgggggcttaccaaaagataatgctgtgaatttgcaaagcg 108
>42209_osa-MIR1428e:mirbase
Length = 110
Score = 127 bits (64), Expect = 2e-30
Identities = 97/108 (89%)
Strand = Plus / Plus
Query: 2 gctttgcgaattcacaggccctatcttgtggtatgaactaagtacgcgatgatttctggt 61
|||| |||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 3 gcttggcgaattcacaggccctatcttgtggtatgaactgggtacgcgatgatttgcact 62
Query: 62 acgtattgggggcttaccataagataatgccgtgaattcgtaaagcgt 109
|||||||||||||||||||||||||||||| |||||| || ||||||
Sbjct: 63 gcgtattgggggcttaccataagataatgccatgaatttgtcaagcgt 110
>42208_osa-MIR1428e:mirbase
Length = 110
Score = 127 bits (64), Expect = 2e-30
Identities = 97/108 (89%)
Strand = Plus / Plus
Query: 2 gctttgcgaattcacaggccctatcttgtggtatgaactaagtacgcgatgatttctggt 61
|||| |||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 3 gcttggcgaattcacaggccctatcttgtggtatgaactgggtacgcgatgatttgcact 62
Query: 62 acgtattgggggcttaccataagataatgccgtgaattcgtaaagcgt 109
|||||||||||||||||||||||||||||| |||||| || ||||||
Sbjct: 63 gcgtattgggggcttaccataagataatgccatgaatttgtcaagcgt 110
>42206_osa-MIR1428c:mirbase
Length = 142
Score = 127 bits (64), Expect = 2e-30
Identities = 94/104 (90%)
Strand = Plus / Plus
Query: 3 ctttgcgaattcacaggccctatcttgtggtatgaactaagtacgcgatgatttctggta 62
|||||||||||| ||||||||||| ||||||||||||| |||||||||| |||| ||||
Sbjct: 20 ctttgcgaattcgcaggccctatcctgtggtatgaactgagtacgcgataatttatggtg 79
Query: 63 cgtattgggggcttaccataagataatgccgtgaattcgtaaag 106
| |||| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 80 catattaggggcttaccataagataatgccatgaattcgcaaag 123
>42205_osa-MIR1428b:mirbase
Length = 124
Score = 127 bits (64), Expect = 2e-30
Identities = 97/108 (89%)
Strand = Plus / Plus
Query: 2 gctttgcgaattcacaggccctatcttgtggtatgaactaagtacgcgatgatttctggt 61
||||||||||||||| || | |||||||||||||||||| |||||| ||||||| ||||
Sbjct: 10 gctttgcgaattcacgggtcttatcttgtggtatgaactgagtacgtaatgatttatggt 69
Query: 62 acgtattgggggcttaccataagataatgccgtgaattcgtaaagcgt 109
| |||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 70 gcatattgggggcttaccataagataatgccatgaattcgcaaagcgt 117
>42204_osa-MIR1428a:mirbase
Length = 120
Score = 127 bits (64), Expect = 2e-30
Identities = 88/96 (91%)
Strand = Plus / Plus
Query: 4 tttgcgaattcacaggccctatcttgtggtatgaactaagtacgcgatgatttctggtac 63
||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| | | |
Sbjct: 12 tttgcaaattcgcaggccctatcttgtggtatgaactgagtacgcgatgatttatcctgc 71
Query: 64 gtattgggggcttaccataagataatgccgtgaatt 99
||||||||||||||||||||||||| ||||||||||
Sbjct: 72 gtattgggggcttaccataagataaagccgtgaatt 107
>42203_osa-MIR1428a:mirbase
Length = 120
Score = 127 bits (64), Expect = 2e-30
Identities = 88/96 (91%)
Strand = Plus / Plus
Query: 4 tttgcgaattcacaggccctatcttgtggtatgaactaagtacgcgatgatttctggtac 63
||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| | | |
Sbjct: 12 tttgcaaattcgcaggccctatcttgtggtatgaactgagtacgcgatgatttatcctgc 71
Query: 64 gtattgggggcttaccataagataatgccgtgaatt 99
||||||||||||||||||||||||| ||||||||||
Sbjct: 72 gtattgggggcttaccataagataaagccgtgaatt 107
