miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42211_osa-MIR1428g:mirbase
Length = 109
Score = 216 bits (109), Expect = 3e-57
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 1 cgctttgcgaattcacaggccctatcttgtggtatgaactgagtacgcgatgatttatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgctttgcgaattcacaggccctatcttgtggtatgaactgagtacgcgatgatttatgg 60
Query: 61 cgcatattgggggcttaccaaaagataatgctgtgaatttgcaaagcgc 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgcatattgggggcttaccaaaagataatgctgtgaatttgcaaagcgc 109
>42207_osa-MIR1428d:mirbase
Length = 124
Score = 159 bits (80), Expect = 5e-40
Identities = 98/104 (94%)
Strand = Plus / Plus
Query: 3 ctttgcgaattcacaggccctatcttgtggtatgaactgagtacgcgatgatttatggcg 62
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 11 ctttgcgaattcacaggccctatattgtggtatgaactgagtacgcgatgatttatggtg 70
Query: 63 catattgggggcttaccaaaagataatgctgtgaatttgcaaag 106
|||||||||||||||||| |||||||||| |||||| ||||||
Sbjct: 71 catattgggggcttaccataagataatgccatgaattcgcaaag 114
>42210_osa-MIR1428f:mirbase
Length = 109
Score = 141 bits (71), Expect = 1e-34
Identities = 98/107 (91%)
Strand = Plus / Plus
Query: 2 gctttgcgaattcacaggccctatcttgtggtatgaactgagtacgcgatgatttatggc 61
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 2 gctttgcgaattcacaggccctatcttgtggtatgaactaagtacgcgatgatttctggt 61
Query: 62 gcatattgggggcttaccaaaagataatgctgtgaatttgcaaagcg 108
| |||||||||||||||| |||||||||| ||||||| | ||||||
Sbjct: 62 acgtattgggggcttaccataagataatgccgtgaattcgtaaagcg 108
>42206_osa-MIR1428c:mirbase
Length = 142
Score = 135 bits (68), Expect = 7e-33
Identities = 95/104 (91%)
Strand = Plus / Plus
Query: 3 ctttgcgaattcacaggccctatcttgtggtatgaactgagtacgcgatgatttatggcg 62
|||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||| |
Sbjct: 20 ctttgcgaattcgcaggccctatcctgtggtatgaactgagtacgcgataatttatggtg 79
Query: 63 catattgggggcttaccaaaagataatgctgtgaatttgcaaag 106
|||||| ||||||||||| |||||||||| |||||| ||||||
Sbjct: 80 catattaggggcttaccataagataatgccatgaattcgcaaag 123
>42205_osa-MIR1428b:mirbase
Length = 124
Score = 135 bits (68), Expect = 7e-33
Identities = 98/108 (90%)
Strand = Plus / Plus
Query: 1 cgctttgcgaattcacaggccctatcttgtggtatgaactgagtacgcgatgatttatgg 60
|||||||||||||||| || | ||||||||||||||||||||||||| |||||||||||
Sbjct: 9 cgctttgcgaattcacgggtcttatcttgtggtatgaactgagtacgtaatgatttatgg 68
Query: 61 cgcatattgggggcttaccaaaagataatgctgtgaatttgcaaagcg 108
||||||||||||||||||| |||||||||| |||||| ||||||||
Sbjct: 69 tgcatattgggggcttaccataagataatgccatgaattcgcaaagcg 116
>42204_osa-MIR1428a:mirbase
Length = 120
Score = 131 bits (66), Expect = 1e-31
Identities = 93/102 (91%)
Strand = Plus / Plus
Query: 4 tttgcgaattcacaggccctatcttgtggtatgaactgagtacgcgatgatttatggcgc 63
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 12 tttgcaaattcgcaggccctatcttgtggtatgaactgagtacgcgatgatttatcctgc 71
Query: 64 atattgggggcttaccaaaagataatgctgtgaatttgcaaa 105
|||||||||||||||| ||||||| || |||||||||||||
Sbjct: 72 gtattgggggcttaccataagataaagccgtgaatttgcaaa 113
>42203_osa-MIR1428a:mirbase
Length = 120
Score = 131 bits (66), Expect = 1e-31
Identities = 93/102 (91%)
Strand = Plus / Plus
Query: 4 tttgcgaattcacaggccctatcttgtggtatgaactgagtacgcgatgatttatggcgc 63
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 12 tttgcaaattcgcaggccctatcttgtggtatgaactgagtacgcgatgatttatcctgc 71
Query: 64 atattgggggcttaccaaaagataatgctgtgaatttgcaaa 105
|||||||||||||||| ||||||| || |||||||||||||
Sbjct: 72 gtattgggggcttaccataagataaagccgtgaatttgcaaa 113
>42209_osa-MIR1428e:mirbase
Length = 110
Score = 113 bits (57), Expect = 3e-26
Identities = 90/101 (89%)
Strand = Plus / Plus
Query: 1 cgctttgcgaattcacaggccctatcttgtggtatgaactgagtacgcgatgatttatgg 60
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2 cgcttggcgaattcacaggccctatcttgtggtatgaactgggtacgcgatgatttgcac 61
Query: 61 cgcatattgggggcttaccaaaagataatgctgtgaatttg 101
|| |||||||||||||||| |||||||||| ||||||||
Sbjct: 62 tgcgtattgggggcttaccataagataatgccatgaatttg 102
>42208_osa-MIR1428e:mirbase
Length = 110
Score = 113 bits (57), Expect = 3e-26
Identities = 90/101 (89%)
Strand = Plus / Plus
Query: 1 cgctttgcgaattcacaggccctatcttgtggtatgaactgagtacgcgatgatttatgg 60
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2 cgcttggcgaattcacaggccctatcttgtggtatgaactgggtacgcgatgatttgcac 61
Query: 61 cgcatattgggggcttaccaaaagataatgctgtgaatttg 101
|| |||||||||||||||| |||||||||| ||||||||
Sbjct: 62 tgcgtattgggggcttaccataagataatgccatgaatttg 102
