miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02003707.1/8900-8747 39946:Oryza sativa Indica
Group
Length = 154
Score = 155 bits (78), Expect = 2e-37
Identities = 118/130 (90%), Gaps = 1/130 (0%)
Strand = Plus / Minus
Query: 33 aaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagacatacatat 92
|||||||||||||||| ||||||||||| | |||||||||| ||||| |||||| ||||
Sbjct: 133 aaaaaccaacctagtatcggatgtgacacatcctagtactacgaatctggacatatatat 74
Query: 93 gtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatgggac 152
|||| ||||||||||||||||||||| ||||| |||||||||||||| |||||||||||
Sbjct: 73 atccaaattcatcgtactagaatatgtcacatccggtcctagattcgt-ttttatgggac 15
Query: 153 ggagggagta 162
||||||||||
Sbjct: 14 ggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 107/130 (82%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 33 aaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagacatacatat 92
|||||| || |||| |||||||||||||| ||||||||| | ||| | || ||| ||||
Sbjct: 22 aaaaacgaatctaggaccggatgtgacatattctagtacgatgaatttggatatatatat 81
Query: 93 gtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatgggac 152
|||||||||| | ||||||| || ||| ||||| | | |||| || | ||||||||||||
Sbjct: 82 gtccagattcgtagtactaggatgtgtcacatccgatactaggtt-ggtttttatgggac 140
Query: 153 ggagggagta 162
|||||||||
Sbjct: 141 agagggagta 150
>RF00906;MIR1122;AAAA02035060.1/17205-17050 39946:Oryza sativa
Indica Group
Length = 156
Score = 155 bits (78), Expect = 2e-37
Identities = 120/134 (89%)
Strand = Plus / Minus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
|||||| ||||||||||||||||||| ||||||||| | |||||| || ||||| |||
Sbjct: 142 gtcccataaaaaaccaacctagtaccagatgtgacacatcctagtattatgaatctggac 83
Query: 85 atacatatgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttt 144
||||||||||||||||||||||||||||| ||||| |||||| || |||||||||||||
Sbjct: 82 atacatatgtccagattcatcgtactagattatgtcacatctagtattagattcgttttt 23
Query: 145 tatgggacggaggg 158
||||||||||||||
Sbjct: 22 tatgggacggaggg 9
Score = 99.6 bits (50), Expect = 1e-20
Identities = 116/138 (84%)
Strand = Plus / Plus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
|||||| ||||||| || ||| ||| |||||||||| |||||||| | ||||| |||
Sbjct: 15 gtcccataaaaaacgaatctaatactagatgtgacataatctagtacgatgaatctggac 74
Query: 85 atacatatgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttt 144
||| ||||||||||||||| |||||| || ||| ||||||||| |||| || ||||||
Sbjct: 75 atatgtatgtccagattcataatactaggatgtgtcacatctggtactaggttggttttt 134
Query: 145 tatgggacggagggagta 162
||||||||||||||||||
Sbjct: 135 tatgggacggagggagta 152
>RF00906;MIR1122;AP008218.1/23548296-23548451 39947:Oryza sativa
Japonica Group
Length = 156
Score = 141 bits (71), Expect = 4e-33
Identities = 113/127 (88%)
Strand = Plus / Plus
Query: 32 aaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagacatacata 91
|||||||||| |||||||| ||||||||| | |||||| || ||||| ||||||||||
Sbjct: 22 aaaaaaccaatctagtaccagatgtgacacatcctagtattatgaatctggacatacata 81
Query: 92 tgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatggga 151
|||||||||||||||||||||| ||||| |||||| || ||||||||||||||||||||
Sbjct: 82 tgtccagattcatcgtactagattatgtcacatctagtattagattcgttttttatggga 141
Query: 152 cggaggg 158
|||||||
Sbjct: 142 cggaggg 148
Score = 99.6 bits (50), Expect = 1e-20
Identities = 116/138 (84%)
Strand = Plus / Minus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
|||||| ||||||| || ||| ||| |||||||||| |||||||| | ||||| |||
Sbjct: 142 gtcccataaaaaacgaatctaatactagatgtgacataatctagtacgatgaatctggac 83
Query: 85 atacatatgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttt 144
||| ||||||||||||||| |||||| || ||| ||||||||| ||||||| ||||||
Sbjct: 82 atatgtatgtccagattcataatactaggatgtgtcacatctggtactagattggttttt 23
Query: 145 tatgggacggagggagta 162
||||| ||||||||||||
Sbjct: 22 tatggaacggagggagta 5
>RF00906;MIR1122;AP008210.1/21918444-21918599 39947:Oryza sativa
Japonica Group
Length = 156
Score = 139 bits (70), Expect = 1e-32
Identities = 121/138 (87%)
Strand = Plus / Minus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
|||||| ||||||||||||||||| | ||||||||| | ||||||||| ||||||||
Sbjct: 142 gtcccataaaaaaccaacctagtatcagatgtgacacatactagtactatgaatctagat 83
Query: 85 atacatatgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttt 144
|||||||||||||||||| | ||||||||||||| | ||| |||| |||||||||||||
Sbjct: 82 atacatatgtccagattcgtaatactagaatatgtcatatccggtcatagattcgttttt 23
Query: 145 tatgggacggagggagta 162
||||||||| ||||||||
Sbjct: 22 tatgggacgaagggagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 116/138 (84%)
Strand = Plus / Plus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
|||||| ||||||| || ||| ||||||| |||||| |||||||| ||| ||||| |||
Sbjct: 15 gtcccataaaaaacgaatctatgaccggatatgacatattctagtattacgaatctggac 74
Query: 85 atacatatgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttt 144
||| ||| || |||||||| ||||||| || ||| ||||||| | |||| || ||||||
Sbjct: 75 atatgtatatctagattcatagtactagtatgtgtcacatctgatactaggttggttttt 134
Query: 145 tatgggacggagggagta 162
||||||||||||||||||
Sbjct: 135 tatgggacggagggagta 152
>RF00906;MIR1122;AACV01007974.1/18422-18267 39947:Oryza sativa
Japonica Group
Length = 156
Score = 139 bits (70), Expect = 1e-32
Identities = 121/138 (87%)
Strand = Plus / Minus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
|||||| |||||||||||||||||| |||||||||| | |||||||||| ||||| |||
Sbjct: 142 gtcccataaaaaaccaacctagtactggatgtgacacatcctagtactacgaatctggac 83
Query: 85 atacatatgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttt 144
|||| | ||||||||||| | |||||||||| ||| ||||| |||||||||||||||||
Sbjct: 82 atacctctgtccagattcgttgtactagaatgtgtcacatcccgtcctagattcgttttt 23
Query: 145 tatgggacggagggagta 162
| |||||||||||||||
Sbjct: 22 ttcgggacggagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 109/131 (83%)
Strand = Plus / Plus
Query: 32 aaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagacatacata 91
||||||| || |||| || |||||||||| ||||||||| || ||||| |||| | ||
Sbjct: 22 aaaaaacgaatctaggacgggatgtgacacattctagtacaacgaatctggacagaggta 81
Query: 92 tgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatggga 151
||||||||||| | ||||||| || ||| ||||| || |||| || |||||||||||||
Sbjct: 82 tgtccagattcgtagtactaggatgtgtcacatccagtactaggttggttttttatggga 141
Query: 152 cggagggagta 162
|||||||||||
Sbjct: 142 cggagggagta 152
>RF00906;MIR1122;ABRL01000294.1/23842-24000 65489:Oryza barthii
Length = 159
Score = 129 bits (65), Expect = 1e-29
Identities = 107/121 (88%)
Strand = Plus / Minus
Query: 43 ctagtaccggatgtgacatgttctagtactacaaatctagacatacatatgtccagattc 102
|||||||| ||| ||||| |||||||||||| ||||| ||||||| |||||||||||
Sbjct: 124 ctagtaccagatatgacacattctagtactacgaatctgagcatacatctgtccagattc 65
Query: 103 atcgtactagaatatgttacatctggtcctagattcgttttttatgggacggagggagta 162
||||||||||||||||| ||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 64 atcgtactagaatatgtcacatccagttctagattcgttttttataggacggagggagta 5
Query: 163 c 163
|
Sbjct: 4 c 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 108/134 (80%), Gaps = 3/134 (2%)
Strand = Plus / Plus
Query: 32 aaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagacatacata 91
||||||| || |||| || ||||||||||| ||||||||| | ||||| |||| | ||
Sbjct: 22 aaaaaacgaatctagaactggatgtgacatattctagtacgatgaatctggacagatgta 81
Query: 92 tgtccagattcatcgtactagaatatgttacatctggtcctagat---tcgttttttatg 148
|| ||||||| | |||||||||| ||| | ||||||| |||| | | | ||||||||
Sbjct: 82 tgctcagattcgtagtactagaatgtgtcatatctggtactagctaggttggtttttatg 141
Query: 149 ggacggagggagta 162
||||||||||||||
Sbjct: 142 ggacggagggagta 155
>RF00906;MIR1122;AACV01010622.1/23023-23178 39947:Oryza sativa
Japonica Group
Length = 156
Score = 117 bits (59), Expect = 5e-26
Identities = 119/139 (85%)
Strand = Plus / Minus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
|||||| |||||| |||||| ||||||||||||||| | |||| ||||| ||||| |||
Sbjct: 142 gtcccataaaaaatcaacctcgtaccggatgtgacacatcctaggactacgaatctggac 83
Query: 85 atacatatgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttt 144
||| | | ||||||||||| ||||||||||||| ||||| ||| ||||||| ||||||
Sbjct: 82 atatctctatccagattcattatactagaatatgtcacatccggtactagatttgttttt 23
Query: 145 tatgggacggagggagtac 163
| |||||||||||||||||
Sbjct: 22 tttgggacggagggagtac 4
Score = 83.8 bits (42), Expect = 7e-16
Identities = 114/138 (82%)
Strand = Plus / Plus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
|||||| ||||||| || ||||||||||||||||||| |||||||| | ||||| ||
Sbjct: 15 gtcccaaaaaaaacaaatctagtaccggatgtgacatattctagtataatgaatctggat 74
Query: 85 atacatatgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttt 144
| | |||||||||||||| | || |||| || ||| ||||| ||| | || || |||||
Sbjct: 75 agagatatgtccagattcgtagtcctaggatgtgtcacatccggtacgaggttgattttt 134
Query: 145 tatgggacggagggagta 162
||||||||||||||||||
Sbjct: 135 tatgggacggagggagta 152
>RF00906;MIR1122;AP008209.1/18198148-18198281 39947:Oryza sativa
Japonica Group
Length = 134
Score = 117 bits (59), Expect = 5e-26
Identities = 89/99 (89%)
Strand = Plus / Minus
Query: 64 tctagtactacaaatctagacatacatatgtccagattcatcgtactagaatatgttaca 123
||||||||||| |||||||||||||||||| || |||||||||| ||||||||| |||
Sbjct: 103 tctagtactacgaatctagacatacatatgcccttattcatcgtaacagaatatgtcaca 44
Query: 124 tctggtcctagattcgttttttatgggacggagggagta 162
|| | || |||||||||||||||||||||||||||||||
Sbjct: 43 tccgatcttagattcgttttttatgggacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 131 ctagattcgttttttatgggacggagggagta 162
||||||| ||||||||||||||||||||||||
Sbjct: 99 ctagattggttttttatgggacggagggagta 130
>RF00906;MIR1122;AAAA02010090.1/14271-14425 39946:Oryza sativa
Indica Group
Length = 155
Score = 117 bits (59), Expect = 5e-26
Identities = 120/139 (86%), Gaps = 1/139 (0%)
Strand = Plus / Minus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
|||||| |||||||||||||| |||||||||||||| ||||||||||| ||||| |||
Sbjct: 141 gtcccataaaaaaccaacctaataccggatgtgacacattctagtactatgaatctggac 82
Query: 85 atacatatgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttt 144
|||||| |||||||||| || ||||||||||||| | ||| || ||||||||||||||
Sbjct: 81 atacatttgtccagatttattatactagaatatgtcaaatcccgttctagattcgttttt 22
Query: 145 tatgggacggagggagtac 163
| ||||| ||||||||||
Sbjct: 21 t-cgggacagagggagtac 4
Score = 97.6 bits (49), Expect = 5e-20
Identities = 112/133 (84%)
Strand = Plus / Plus
Query: 32 aaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagacatacata 91
||||||| || |||| || |||| |||||| |||||||| | |||||| |||| | ||
Sbjct: 21 aaaaaacgaatctagaacgggatttgacatattctagtataataaatctggacaaatgta 80
Query: 92 tgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatggga 151
||||||||||||| |||||||||| ||| ||||| ||| ||| || |||||||||||||
Sbjct: 81 tgtccagattcatagtactagaatgtgtcacatccggtattaggttggttttttatggga 140
Query: 152 cggagggagtaca 164
|||||||||||||
Sbjct: 141 cggagggagtaca 153
>RF00906;MIR1122;AP002483.1/24463-24606 39947:Oryza sativa Japonica
Group
Length = 144
Score = 111 bits (56), Expect = 3e-24
Identities = 74/80 (92%)
Strand = Plus / Minus
Query: 83 acatacatatgtccagattcatcgtactagaatatgttacatctggtcctagattcgttt 142
||||||||||||||||||||||||||||||||||| | |||| | ||||| ||||||||
Sbjct: 84 acatacatatgtccagattcatcgtactagaatatatcacatacgatcctatattcgttt 25
Query: 143 tttatgggacggagggagta 162
||||||||||||||||||||
Sbjct: 24 tttatgggacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 gttttttatgggacggagggagta 162
||||||||||||||||||||||||
Sbjct: 117 gttttttatgggacggagggagta 140
>RF00906;MIR1122;AAAA02013022.1/7455-7611 39946:Oryza sativa Indica
Group
Length = 157
Score = 109 bits (55), Expect = 1e-23
Identities = 119/139 (85%), Gaps = 1/139 (0%)
Strand = Plus / Minus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
|||||| |||||||||||||||||| ||||||| || | ||||||||| ||||| |||
Sbjct: 143 gtcccataaaaaaccaacctagtactagatgtgaaatatcctagtactatgaatctggac 84
Query: 85 ataca-tatgtccagattcatcgtactagaatatgttacatctggtcctagattcgtttt 143
||| ||| ||||||||||| |||||||||||||| |||| ||| |||||||| ||||
Sbjct: 83 ataatgtatatccagattcatagtactagaatatgtcacatacggtactagattcttttt 24
Query: 144 ttatgggacggagggagta 162
|||||||||| ||||||||
Sbjct: 23 ttatgggacgaagggagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 119/139 (85%), Gaps = 1/139 (0%)
Strand = Plus / Plus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
|||||| |||||| || ||||||||| ||||||||| ||||||||||| ||||| ||
Sbjct: 15 gtcccataaaaaaagaatctagtaccgtatgtgacatattctagtactatgaatctggat 74
Query: 85 atacat-atgtccagattcatcgtactagaatatgttacatctggtcctagattcgtttt 143
|||||| |||||||||||||| ||||||| |||| | |||||| || |||| || |||||
Sbjct: 75 atacattatgtccagattcatagtactaggatatttcacatctagtactaggttggtttt 134
Query: 144 ttatgggacggagggagta 162
|||||||||| ||||||||
Sbjct: 135 ttatgggacgaagggagta 153
>RF00906;MIR1122;AAAA02005552.1/15961-15806 39946:Oryza sativa
Indica Group
Length = 156
Score = 99.6 bits (50), Expect = 1e-20
Identities = 116/138 (84%)
Strand = Plus / Minus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
|||||| |||||||||||||| || ||||||||||| | ||| |||| ||||| ||
Sbjct: 142 gtcccataaaaaaccaacctattatcggatgtgacacatcctaatactgtgaatctgaac 83
Query: 85 atacatatgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttt 144
|||||| |||||||||| || ||| |||||||||| ||| ||| ||||||||||||||
Sbjct: 82 atacatttgtccagatttatagtattagaatatgtcgtatccggtactagattcgttttt 23
Query: 145 tatgggacggagggagta 162
||||||| ||||||||||
Sbjct: 22 tatgggatggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 112/138 (81%)
Strand = Plus / Plus
Query: 26 tcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagaca 85
||||| ||||||| || |||||||||||| ||||| ||||| ||||| |||||| ||||
Sbjct: 16 tcccataaaaaacgaatctagtaccggatacgacatattctaatactataaatctggaca 75
Query: 86 tacatatgtccagattcatcgtactagaatatgttacatctggtcctagattcgtttttt 145
| ||||| |||||||| ||| ||| || ||| ||||| | | ||| || |||||||
Sbjct: 76 aatgtatgttcagattcacagtattaggatgtgtcacatccgataataggttggtttttt 135
Query: 146 atgggacggagggagtac 163
|||||||| |||||||||
Sbjct: 136 atgggacgaagggagtac 153
>RF00906;MIR1122;AAAA02031907.1/29073-28940 39946:Oryza sativa
Indica Group
Length = 134
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 97 agattcatcgtactagaatatgttacatctggtcctagattcgttttttatgggacggag 156
||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || |||
Sbjct: 70 agattcatcgtactagaatatgtcacatccggtcctagattcgttttttatggtacagag 11
Query: 157 ggagta 162
||||||
Sbjct: 10 ggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 32 aaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
||||||| || |||| |||||||||||||| ||||||||| | |||||||||
Sbjct: 22 aaaaaacgaatctaggaccggatgtgacatattctagtacgatgaatctagac 74
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 27 cccacaaaaaaccaacctagtaccggatgtgaca 60
|||| |||||||||||||| ||||| ||||||||
Sbjct: 118 cccataaaaaaccaacctaataccgaatgtgaca 85
>RF00906;MIR1122;AP008209.1/128298-128150 39947:Oryza sativa
Japonica Group
Length = 149
Score = 89.7 bits (45), Expect = 1e-17
Identities = 109/131 (83%), Gaps = 7/131 (5%)
Strand = Plus / Minus
Query: 32 aaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagacatacata 91
||||||||||||||||||||||| | |||| | ||||||| |||||||| ||||
Sbjct: 128 aaaaaaccaacctagtaccggatataacatatcctagtacaacaaatctggaca------ 75
Query: 92 tgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatggga 151
||||||||||||| ||||||||||||| || || | | ||||||||||||||||||| |
Sbjct: 74 -gtccagattcatcatactagaatatgtcacgtccgattctagattcgttttttatggaa 16
Query: 152 cggagggagta 162
|| || |||||
Sbjct: 15 cgaagagagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 92 tgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatggga 151
|||||||||| | ||||||| |||||||| ||| ||| |||| || ||||||||||| |
Sbjct: 75 tgtccagatttgttgtactaggatatgttatatccggtactaggttggttttttatggaa 134
Query: 152 cggagggagta 162
|||||||||||
Sbjct: 135 cggagggagta 145
>RF00906;MIR1122;AP008209.1/35560975-35561101 39947:Oryza sativa
Japonica Group
Length = 127
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 92 tgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatggga 151
|||| |||||| | ||||||| || ||| ||||| |||||||||||||||||||||||||
Sbjct: 75 tgtctagattcgtagtactaggatgtgtcacatccggtcctagattcgttttttatggga 16
Query: 152 cggagggagta 162
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
|||||| ||||||| || |||| ||||||||||||| | |||||||||| |||||||||
Sbjct: 15 gtcccataaaaaacgaatctaggaccggatgtgacacatcctagtactacgaatctagac 74
Query: 85 a 85
|
Sbjct: 75 a 75
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 26 tcccacaaaaaaccaacctagtaccggatgtgac 59
||||| |||||| |||||||||||||||||||||
Sbjct: 112 tcccataaaaaaacaacctagtaccggatgtgac 79
>RF00906;MIR1122;AP008209.1/34072110-34071977 39947:Oryza sativa
Japonica Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 96 cagattcatcgtactagaatatgttacatctggtcctagattcgttttttatgggacgga 155
|||||| || |||||| | ||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 64 cagatttattgtactatagtatgtcacatccggtcctagattcgttttttatgggacgga 123
Query: 156 gggagta 162
|||||||
Sbjct: 124 gggagta 130
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 108 actagaatatgttacatctggtcctagattcgttttttatgggacggaggga 159
|||| ||||||| | ||| ||||||||||| ||||||||||||| |||||||
Sbjct: 59 actataatatgtcatatccggtcctagatttgttttttatgggatggaggga 8
>RF00906;MIR1122;AC128646.5/47101-47248 39947:Oryza sativa Japonica
Group
Length = 148
Score = 85.7 bits (43), Expect = 2e-16
Identities = 114/137 (83%), Gaps = 8/137 (5%)
Strand = Plus / Minus
Query: 26 tcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagaca 85
||||| |||||| ||||||||||| |||||||||| ||||||||| | |||||||||||
Sbjct: 133 tcccataaaaaatcaacctagtactggatgtgacacattctagtacaataaatctagaca 74
Query: 86 tacatatgtccagattcatcgtactagaatatgttacatctggtcctagattcgtttttt 145
||||||||| || |||||||||| ||| ||||| ||| |||||||||| |||
Sbjct: 73 -------gtccagatttattgtactagaatgtgtcacatcccgtcatagattcgttcttt 21
Query: 146 atgggacggagggagta 162
||||||||||||||||
Sbjct: 20 -tgggacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 92 tgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatggga 151
|||| ||||| || |||||||||| ||| ||||| || |||| || ||||||||||||
Sbjct: 74 tgtctagatttattgtactagaatgtgtcacatccagtactaggttgattttttatggga 133
Query: 152 cggagggagta 162
||||||||||
Sbjct: 134 tggagggagta 144
>RF00906;MIR1122;AC133007.4/76186-76053 39947:Oryza sativa Japonica
Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 96 cagattcatcgtactagaatatgttacatctggtcctagattcgttttttatgggacgga 155
|||||| || |||||| | ||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 71 cagatttattgtactatagtatgtcacatccggtcctagattcgttttttatgggacgga 12
Query: 156 gggagta 162
|||||||
Sbjct: 11 gggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 108 actagaatatgttacatctggtcctagattcgttttttatgggacggaggga 159
|||| ||||||| | ||| ||||||||||| ||||||||||||| |||||||
Sbjct: 76 actataatatgtcatatccggtcctagatttgttttttatgggatggaggga 127
>RF00906;MIR1122;AAAA02003006.1/3399-3554 39946:Oryza sativa Indica
Group
Length = 156
Score = 85.7 bits (43), Expect = 2e-16
Identities = 115/139 (82%)
Strand = Plus / Plus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
|||||| || ||| |||||||||||| ||||||||| | ||| |||||||||||||||
Sbjct: 15 gtcccataagaaaacaacctagtaccagatgtgacacatcttagaactacaaatctagac 74
Query: 85 atacatatgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttt 144
|||| | ||| ||||||| | ||| ||| || ||| ||||| ||| |||| || ||||||
Sbjct: 75 atacctgtgttcagattcgtagtattaggatgtgtcacatccggtactaggttggttttt 134
Query: 145 tatgggacggagggagtac 163
||||||| ||||||||||
Sbjct: 135 tatgggatagagggagtac 153
Score = 73.8 bits (37), Expect = 7e-13
Identities = 112/137 (81%)
Strand = Plus / Minus
Query: 26 tcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagaca 85
||||| ||||||||||||||||||||||||||||| | ||| |||||| ||||| |||
Sbjct: 141 tcccataaaaaaccaacctagtaccggatgtgacacatcctaatactacgaatctgaaca 82
Query: 86 tacatatgtccagattcatcgtactagaatatgttacatctggtcctagattcgtttttt 145
| |||||| ||||| | || ||| || ||| ||||||||| |||| || ||| ||
Sbjct: 81 caggtatgtctagatttgtagttctaagatgtgtcacatctggtactaggttgttttctt 22
Query: 146 atgggacggagggagta 162
|||||||||||||||||
Sbjct: 21 atgggacggagggagta 5
>RF00906;MIR1122;AC135208.3/104034-103893 39947:Oryza sativa
Japonica Group
Length = 142
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 104 tcgtactagaatatgttacatctggtcctagattcgttttttatgggacggagggagta 162
|||||||||||||||| ||||| |||||||||||| |||||||||||| ||||||||||
Sbjct: 63 tcgtactagaatatgtcacatccggtcctagattcattttttatgggatggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 87 acatatgtccagattcatcgtactagaatatgttacatctggtcctagattcgtttttta 146
|||||||||||||||| | ||| ||| || ||| ||||| ||| |||| || ||||||||
Sbjct: 63 acatatgtccagattcgtagtaataggatgtgtcacatccggtactaggttggtttttta 122
Query: 147 tgggacggagggagtac 163
|||||| ||||||||||
Sbjct: 123 tgggacagagggagtac 139
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 26 tcccacaaaaaaccaacctagtaccggatgtgacatgttctagtac 71
||||| |||||| || |||| |||||||||||||| |||||||||
Sbjct: 16 tcccataaaaaatgaatctaggaccggatgtgacatattctagtac 61
>RF00906;MIR1122;AACV01016060.1/4048-4184 39947:Oryza sativa
Japonica Group
Length = 137
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 90 tatgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatgg 149
||||||||||||||| |||||||||||| | ||| |||| ||||||||||||||||||
Sbjct: 77 tatgtccagattcatagtactagaatataccatatccggtcatagattcgttttttatgg 18
Query: 150 gacggagggagtac 163
|||| |||||||||
Sbjct: 17 gacgaagggagtac 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 gttttttatgggacggagggagta 162
||||||||||||||||||||||||
Sbjct: 110 gttttttatgggacggagggagta 133
>RF00906;MIR1122;AAAA02020879.1/5788-5634 39946:Oryza sativa Indica
Group
Length = 155
Score = 81.8 bits (41), Expect = 3e-15
Identities = 111/133 (83%), Gaps = 1/133 (0%)
Strand = Plus / Minus
Query: 32 aaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagacatacata 91
||||||||||||||||| | ||||||| ||||| ||||| ||||| |||||| ||
Sbjct: 134 aaaaaaccaacctagtaatagttgtgacacattctaatactatgaatctggacatatatc 75
Query: 92 tgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatggga 151
| ||||||||||| ||| |||||| ||| |||||| || |||||||||||||| ||||
Sbjct: 74 tatccagattcattgta-tagaatgtgtcacatctaatcttagattcgtttttttcggga 16
Query: 152 cggagggagtaca 164
|||||||||||||
Sbjct: 15 cggagggagtaca 3
Score = 52.0 bits (26), Expect = 3e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 89 atatgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatg 148
|||||||||||||||| ||| |||||| ||| ||| || | |||| || |||||||| |
Sbjct: 78 atatgtccagattcatagtattagaatgtgtcacaactattactaggttggttttttacg 137
Query: 149 ggacggagggagta 162
|||||||||||||
Sbjct: 138 agacggagggagta 151
>RF00906;MIR1122;AACV01005006.1/10159-10274 39947:Oryza sativa
Japonica Group
Length = 116
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 90 tatgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatgg 149
||||||||||||||| |||||| ||| ||| ||||| ||| |||| || |||||||||||
Sbjct: 40 tatgtccagattcatagtactaaaatgtgtcacatccggtactaggttggttttttatgg 99
Query: 150 gacggagggagta 162
|||||||||||||
Sbjct: 100 gacggagggagta 112
Score = 73.8 bits (37), Expect = 7e-13
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 128 gtcctagattcgttttttatgggacggagggagtaca 164
|||||||||||||||||||||||||||||||||||||
Sbjct: 39 gtcctagattcgttttttatgggacggagggagtaca 3
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
|||||| ||||||||||||||||||||||||||||| || |||||||| ||||| |||
Sbjct: 102 gtcccataaaaaaccaacctagtaccggatgtgacacattttagtactatgaatctggac 43
Query: 85 ata 87
|||
Sbjct: 42 ata 40
>RF00906;MIR1122;AACV01001495.1/5727-5857 39947:Oryza sativa
Japonica Group
Length = 131
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
||||||||||||||||||||||||| ||||| ||||| ||||||||| | ||||||||||
Sbjct: 117 gtcccacaaaaaaccaacctagtactggatgagacattttctagtacaataaatctagac 58
Query: 85 a 85
|
Sbjct: 57 a 57
>RF00906;MIR1122;AAAA02010900.1/7833-7673 39946:Oryza sativa Indica
Group
Length = 161
Score = 79.8 bits (40), Expect = 1e-14
Identities = 120/145 (82%), Gaps = 5/145 (3%)
Strand = Plus / Plus
Query: 24 tgtcccacaaaaaaccaacctagtaccgga-tgtgacatgttctagtactacaaatctag 82
|||||||||||| | |||||||||||| || | |||||| | ||||||||| ||||| |
Sbjct: 14 tgtcccacaaaatatcaacctagtacctgactttgacatatcctagtactatgaatctgg 73
Query: 83 acatacatatgtccagattcatcgtactagaatatgtta----catctggtcctagattc 138
||||| || ||||||||||| | ||||||| || ||| | |||| ||| |||| ||
Sbjct: 74 acatatatctgtccagattcgtagtactaggatgtgtcaacatcatcaggtactaggttg 133
Query: 139 gttttttatgggacggagggagtac 163
|||||||||||||||||||||||||
Sbjct: 134 gttttttatgggacggagggagtac 158
Score = 75.8 bits (38), Expect = 2e-13
Identities = 84/99 (84%), Gaps = 4/99 (4%)
Strand = Plus / Minus
Query: 25 gtcccacaaaaaaccaacctagtaccggatg----tgacatgttctagtactacaaatct 80
|||||| ||||||||||||||||||| |||| ||||| | |||||||||| |||||
Sbjct: 147 gtcccataaaaaaccaacctagtacctgatgatgttgacacatcctagtactacgaatct 88
Query: 81 agacatacatatgtccagattcatcgtactagaatatgt 119
|||| | |||||||||||||||| ||||||| ||||||
Sbjct: 87 ggacagatatatgtccagattcatagtactaggatatgt 49
>RF00906;MIR1122;AAAA02011008.1/11238-11369 39946:Oryza sativa
Indica Group
Length = 132
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 90 tatgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatgg 149
||||||||||||| | ||| ||| || ||| |||||| ||||||| || |||||||||||
Sbjct: 56 tatgtccagattcgttgtaataggatgtgtcacatctagtcctaggttggttttttatgg 115
Query: 150 gacggagggagtac 163
||||||||||||||
Sbjct: 116 gacggagggagtac 129
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 110 tagaatatgttacatctggtcctagattcgttttttatgggacggagggagta 162
|||||||||| | |||| |||||||||| ||||||| |||||||||||||||
Sbjct: 57 tagaatatgtcatatctagtcctagatttattttttaggggacggagggagta 5
>RF00906;MIR1122;AC037426.12/45307-45458 39947:Oryza sativa Japonica
Group
Length = 152
Score = 73.8 bits (37), Expect = 7e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 86 tacatatgtccagattcatcgtactagaatatgttacatctggtcctagattcgtttttt 145
||||| ||||||||||| | ||||||||| ||| | ||| ||| |||| ||||||||||
Sbjct: 81 tacatttgtccagattcgtagtactagaacgtgtcatatccggttctagtttcgtttttt 22
Query: 146 atgggacggagggagta 162
|||||||||||||||||
Sbjct: 21 atgggacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 112/138 (81%), Gaps = 4/138 (2%)
Strand = Plus / Plus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
|||||| ||||||| || |||| ||||||| ||||| ||||||||||||| ||||| |
Sbjct: 15 gtcccataaaaaacgaaactagaaccggatatgacacgttctagtactacgaatctgg-- 72
Query: 85 atacatatgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttt 144
||| |||| || |||||| |||||| ||| ||| ||||| | |||| || | ||||
Sbjct: 73 --acaaatgtacaaattcatagtactacaatgtgtcacatccaatactaggttagctttt 130
Query: 145 tatgggacggagggagta 162
||||||||||||||||||
Sbjct: 131 tatgggacggagggagta 148
>RF00906;MIR1122;AP008212.1/202637-202758 39947:Oryza sativa
Japonica Group
Length = 122
Score = 73.8 bits (37), Expect = 7e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
|||||| | ||||||||||||||||||||||||||| | |||||||||| |||||||||
Sbjct: 108 gtcccatagaaaaccaacctagtaccggatgtgacacatcctagtactacgaatctagac 49
Query: 85 a 85
|
Sbjct: 48 a 48
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 92 tgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatggga 151
|||| |||||| | ||||||| || ||| ||||| ||| |||| || ||||| |||||||
Sbjct: 48 tgtctagattcgtagtactaggatgtgtcacatccggtactaggttggttttctatggga 107
Query: 152 cggagggagt 161
||||||||||
Sbjct: 108 cggagggagt 117
>RF00906;MIR1122;AP005416.3/143775-143639 39947:Oryza sativa
Japonica Group
Length = 137
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 110 tagaatatgttacatctggtcctagattcgttttttatgggacggagggagta 162
|||||||||||||||| ||| ||||||||||||||||||||| |||||||||
Sbjct: 81 tagaatatgttacatccggtactagattcgttttttatgggatagagggagta 133
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 140 ttttttatgggacggagggagtac 163
||||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagtac 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 26 tcccacaaaaaaccaacctagtaccggatgtgacatgttcta 67
||||| ||||||| || |||||||||||||| |||| |||||
Sbjct: 122 tcccataaaaaacgaatctagtaccggatgtaacatattcta 81
>RF00906;MIR1122;AACV01014928.1/15280-15408 39947:Oryza sativa
Japonica Group
Length = 129
Score = 73.8 bits (37), Expect = 7e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 94 tccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatgggacg 153
||||||||| | |||||||||||||| ||||| |||||||||||||| ||||||| ||||
Sbjct: 72 tccagattcgtagtactagaatatgtcacatccggtcctagattcgt-ttttatgagacg 14
Query: 154 gagggagta 162
||| |||||
Sbjct: 13 gagagagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 114 atatgttacatctggtcctagattcgttttttatgggacggagggagta 162
|||||||||||| ||| |||| || ||||||||||||||||||| ||||
Sbjct: 77 atatgttacatccggtactaggttggttttttatgggacggaggaagta 125
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacat 61
|||||| ||||||||||||||||||||||||| ||||
Sbjct: 115 gtcccataaaaaaccaacctagtaccggatgtaacat 79
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 33 aaaaaccaacctagtaccggatgtgacatgttctagtactacaaatct 80
|||||| || |||| |||||||||||||| |||||||||||| |||||
Sbjct: 22 aaaaacgaatctaggaccggatgtgacatattctagtactacgaatct 69
>RF00906;MIR1122;ABRL01002011.1/9416-9570 65489:Oryza barthii
Length = 155
Score = 71.9 bits (36), Expect = 3e-12
Identities = 81/96 (84%)
Strand = Plus / Minus
Query: 67 agtactacaaatctagacatacatatgtccagattcatcgtactagaatatgttacatct 126
|||||||| ||||| |||| | | ||||||||||| | |||||||||||||| |||||
Sbjct: 100 agtactacgaatctggacaatcctctgtccagattcgtagtactagaatatgtcacatcc 41
Query: 127 ggtcctagattcgttttttatgggacggagggagta 162
|||||| || ||||||||||| ||||||||||||
Sbjct: 40 tatcctaggtttgttttttatggaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 107/130 (82%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 32 aaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagacatacata 91
||||||| ||||||| | ||||||||||| |||||||||||| ||||| |||| |
Sbjct: 22 aaaaaacaaacctaggataggatgtgacatattctagtactacgaatctggacagaggat 81
Query: 92 tgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatggga 151
||||||||||| | ||||| | || ||| ||||| ||||||| || |||| ||||||||
Sbjct: 82 tgtccagattcgtagtact-ggatgtgtcacatcatgtcctaggtttgtttcttatggga 140
Query: 152 cggagggagt 161
||||||||||
Sbjct: 141 cggagggagt 150
>RF00906;MIR1122;AP008214.1/666276-666163 39947:Oryza sativa
Japonica Group
Length = 114
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 129 tcctagattcgttttttatgggacggagggagta 162
||||||||||||||||||||||||||||||||||
Sbjct: 38 tcctagattcgttttttatgggacggagggagta 5
>RF00906;MIR1122;AP004566.3/93541-93654 39947:Oryza sativa Japonica
Group
Length = 114
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 129 tcctagattcgttttttatgggacggagggagta 162
||||||||||||||||||||||||||||||||||
Sbjct: 77 tcctagattcgttttttatgggacggagggagta 110
>RF00906;MIR1122;AC097111.2/81392-81238 39947:Oryza sativa Japonica
Group
Length = 155
Score = 67.9 bits (34), Expect = 4e-11
Identities = 113/138 (81%), Gaps = 1/138 (0%)
Strand = Plus / Minus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
|||||| ||||||||||||||| || |||||||||| | |||||| || |||||||||
Sbjct: 141 gtcccataaaaaaccaacctaggactggatgtgacacatcctagtaaaacgaatctagac 82
Query: 85 atacatatgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttt 144
|| ||||||| || ||| | |||||||||| || ||| | || ||| ||||||||||
Sbjct: 81 atgcatatgttcatatttgttgtactagaatgtgccaca-ccagttctacattcgttttt 23
Query: 145 tatgggacggagggagta 162
|||||||| ||||||||
Sbjct: 22 tatgggacaaagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 107 tactagaatatgttacatctggtcctagattcgttttttatgggacggagggagtac 163
|||||| || ||| ||||| ||||||| || ||||||||||||||| |||||||||
Sbjct: 96 tactaggatgtgtcacatccagtcctaggttggttttttatgggacgaagggagtac 152
>RF00906;MIR1122;AAAA02027770.1/12261-12396 39946:Oryza sativa
Indica Group
Length = 136
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
|||||| | |||||||||||||||| ||||||||||| | |||||||||| ||||| |||
Sbjct: 122 gtcccatacaaaaccaacctagtactggatgtgacatatcctagtactacgaatctggac 63
Query: 85 a 85
|
Sbjct: 62 a 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 92 tgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatggga 151
||||||||||| | ||||||| |||||| ||||| || |||| || ||||| |||||||
Sbjct: 62 tgtccagattcgtagtactaggatatgtcacatccagtactaggttggttttgtatggga 121
Query: 152 cggagggagta 162
|||||||||||
Sbjct: 122 cggagggagta 132
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 110 tagaatatgttacatctggtcctagattcgttttttatgggacggagggagta 162
||||||| || ||||| |||||||||||||||||| ||| |||||||||||
Sbjct: 57 tagaatacgtcacatccagtcctagattcgtttttttcggggcggagggagta 5
>RF00906;MIR1122;AB206885.1/121-10 39947:Oryza sativa Japonica Group
Length = 112
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 106 gtactagaatatgttacatctggtcctagattcgttttttatgggacggagggagta 162
|||||||||| ||| ||||| || |||||||||||||||||||||||||||||||
Sbjct: 52 gtactagaatgtgtcacatccagttttagattcgttttttatgggacggagggagta 108
>RF00906;MIR1122;AACV01009571.1/16790-16914 39947:Oryza sativa
Japonica Group
Length = 125
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 93 gtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatgggac 152
|||||| ||| | |||||||||||||| |||| | | ||||||| ||||||||||||||
Sbjct: 74 gtccaggttcgttgtactagaatatgtcacatataattctagatttgttttttatgggac 15
Query: 153 ggagggagtaca 164
||||| ||||||
Sbjct: 14 ggaggaagtaca 3
>RF00906;MIR1122;AAAA02017131.1/7123-7250 39946:Oryza sativa Indica
Group
Length = 128
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 92 tgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatggga 151
|||||||||| | |||||| |||||| ||||| || ||||||| |||||||||||||
Sbjct: 75 tgtccagatttgtagtactaagatatgtcacatcctgtactagatttgttttttatggga 16
Query: 152 cggagggagta 162
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
|||||| ||||||| || ||||||| ||||||||||| | ||||||||||||||| |||
Sbjct: 15 gtcccataaaaaacaaatctagtacaggatgtgacatatcttagtactacaaatctggac 74
Query: 85 a 85
|
Sbjct: 75 a 75
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 117 tgttacatctggtcctagattcgttttttatgggacggagggagta 162
|||||||||| || |||| || ||||||||||||| ||||||||||
Sbjct: 79 tgttacatcttgtgctaggtttgttttttatgggatggagggagta 124
>RF00906;MIR1122;AAAA02022804.1/34746-34633 39946:Oryza sativa
Indica Group
Length = 114
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 129 tcctagattcgttttttatgggacggagggagta 162
|||||||||| |||||||||||||||||||||||
Sbjct: 38 tcctagattctttttttatgggacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 139 gttttttatgggacggagggagtaca 164
||||||||||||||| ||||||||||
Sbjct: 87 gttttttatgggacgaagggagtaca 112
>RF00906;MIR1122;AAAA02022392.1/33564-33694 39946:Oryza sativa
Indica Group
Length = 131
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 92 tgtccagattcatcgtactagaatatgttacatc 125
|||||||||||||||||||||||||||| |||||
Sbjct: 75 tgtccagattcatcgtactagaatatgtcacatc 42
>RF00906;MIR1122;AC111016.2/25572-25452 39947:Oryza sativa
Japonica Group
Length = 121
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 40 aacctagtaccggatgtgacatgttctagtactacaaatct 80
||||||| |||||||||||||| |||||||||||| |||||
Sbjct: 92 aacctaggaccggatgtgacattttctagtactacgaatct 52
Score = 52.0 bits (26), Expect = 3e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 97 agattcatcgtactagaatatgttacatctggtcctagattcgttttttatgggacggag 156
|||||| | ||||||||| |||| ||||| |||||||| ||| | | || ||||||||||
Sbjct: 52 agattcgtagtactagaaaatgtcacatccggtcctaggttcttatattttgggacggag 111
Query: 157 ggagta 162
||||||
Sbjct: 112 ggagta 117
>RF00906;MIR1122;AC120991.3/108993-108909 39947:Oryza sativa
Japonica Group
Length = 85
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 126 tggtcctagattcgttttttatgggacggagggagta 162
|||||||| ||| ||||||||||||||||||||||||
Sbjct: 45 tggtcctaaatttgttttttatgggacggagggagta 81
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 141 tttttatgggacggagggagta 162
||||||||||||||||||||||
Sbjct: 26 tttttatgggacggagggagta 5
>RF00906;MIR1122;AAAA02026282.1/2845-2975 39946:Oryza sativa Indica
Group
Length = 131
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 91 atgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatggg 150
|||||||||||| | ||||||||| ||| ||||| |||||||| ||| | | || ||||
Sbjct: 76 atgtccagattcgtagtactagaaaatgccacatccggtcctaggttcttatattttggg 17
Query: 151 acggagggagta 162
||||||||||||
Sbjct: 16 acggagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 40 aacctagtaccggatgtgacatgttctagtactacaaatctagacat 86
||||||| |||||||||| ||| |||||||||||| ||||| |||||
Sbjct: 30 aacctaggaccggatgtggcattttctagtactacgaatctggacat 76
>RF00906;MIR1122;AAAA02027850.1/6458-6302 39946:Oryza sativa
Indica Group
Length = 157
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 39 caacctagtaccggatgtgacatgttctagtactacaaatctagacat 86
|||||||||||||||||||| ||| ||||||||||| |||| |||||
Sbjct: 29 caacctagtaccggatgtgatgtgtcctagtactacatatctggacat 76
>RF00906;MIR1122;AC092389.4/93429-93555 39947:Oryza sativa Japonica
Group
Length = 127
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 131 ctagattcgttttttatgggacggagggagta 162
||||||||||||| ||||||||||||||||||
Sbjct: 36 ctagattcgttttatatgggacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacat 61
|||||| |||||| ||||||||||| |||||||||||
Sbjct: 113 gtcccataaaaaatcaacctagtactggatgtgacat 77
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 140 ttttttatgggacggagggagta 162
|||||||||||||||||||||||
Sbjct: 101 ttttttatgggacggagggagta 123
>RF00906;MIR1122;AP008214.1/25592318-25592474 39947:Oryza sativa
Japonica Group
Length = 157
Score = 56.0 bits (28), Expect = 2e-07
Identities = 107/132 (81%), Gaps = 1/132 (0%)
Strand = Plus / Plus
Query: 32 aaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagacatacata 91
||||| ||||||||| | ||||| || || ||||||||| || || | |||| |||||
Sbjct: 22 aaaaacccaacctaggatgggatgggagatattctagtacaacgtatgtggacagacata 81
Query: 92 tgtccagattcatcgtactagaatatgttacatctggtcctagatt-cgttttttatggg 150
||||||||| ||| |||||||||| ||| |||| |||||| || ||||||| ||||
Sbjct: 82 tgtccagatacattgtactagaatgtgtcccatcccatcctaggttgggttttttttggg 141
Query: 151 acggagggagta 162
||||||||||||
Sbjct: 142 acggagggagta 153
>RF00906;MIR1122;AC217582.2/26328-26173 4537:Oryza punctata
Length = 156
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 91 atgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatggg 150
|||||||||||||| ||||||||| | | ||||| ||||||| || |||||| ||||
Sbjct: 76 atgtccagattcattgtactagaaaacatcacatcccgtcctaggttggtttttattggg 17
Query: 151 acggagggagta 162
||||||||||||
Sbjct: 16 acggagggagta 5
>RF00906;MIR1122;AP004761.3/79165-79009 39947:Oryza sativa Japonica
Group
Length = 157
Score = 56.0 bits (28), Expect = 2e-07
Identities = 107/132 (81%), Gaps = 1/132 (0%)
Strand = Plus / Minus
Query: 32 aaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagacatacata 91
||||| ||||||||| | ||||| || || ||||||||| || || | |||| |||||
Sbjct: 136 aaaaacccaacctaggatgggatgggagatattctagtacaacgtatgtggacagacata 77
Query: 92 tgtccagattcatcgtactagaatatgttacatctggtcctagatt-cgttttttatggg 150
||||||||| ||| |||||||||| ||| |||| |||||| || ||||||| ||||
Sbjct: 76 tgtccagatacattgtactagaatgtgtcccatcccatcctaggttgggttttttttggg 17
Query: 151 acggagggagta 162
||||||||||||
Sbjct: 16 acggagggagta 5
>RF00906;MIR1122;AACV01006502.1/3843-3983 39947:Oryza sativa
Japonica Group
Length = 141
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatct 80
|||||| ||||||||||| ||||| ||||||||||| || |||| ||||||||||
Sbjct: 127 gtcccataaaaaaccaacttagtatcggatgtgacacattatagttctacaaatct 72
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 gttttttatgggacggagggagta 162
||||||||||||||||||||||||
Sbjct: 114 gttttttatgggacggagggagta 137
>RF00906;MIR1122;AAAA02028930.1/6053-6188 39946:Oryza sativa Indica
Group
Length = 136
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 92 tgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatggga 151
||||||||||| | ||||||| || ||| ||||| || |||||| |||||||||||||
Sbjct: 62 tgtccagattcgttgtactaggatgtgtcacatccagtattagattggttttttatggga 121
Query: 152 cggagggagta 162
|||||| ||||
Sbjct: 122 cggaggaagta 132
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 132 tagattcgttttttatgggacggagggagta 162
|||||||||||||||| |||| |||||||||
Sbjct: 35 tagattcgttttttataggacagagggagta 5
>RF00906;MIR1122;AACV01012191.1/7968-7814 39947:Oryza sativa
Japonica Group
Length = 155
Score = 54.0 bits (27), Expect = 7e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 96 cagattcatcgtactagaatatgttacatctggtcctagattcgttttttatgggacgga 155
||||||| | ||||||| || ||| ||||| ||| |||||||||||||| ||||||||
Sbjct: 85 cagattcgtagtactaggatgtgtcacatccagtcttagattcgtttttttcgggacgga 144
Query: 156 gggagta 162
|||||||
Sbjct: 145 gggagta 151
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 139 gttttttatgggacggagggagta 162
||||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagta 5
>RF00906;MIR1122;AP003725.3/107083-106927 39947:Oryza sativa
Japonica Group
Length = 157
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 92 tgtccagattcatcgtactagaatatgttacatc 125
|||||| ||||||||||||||||||||| |||||
Sbjct: 75 tgtccatattcatcgtactagaatatgtcacatc 42
>RF00906;MIR1122;AAAA02027326.1/570-454 39946:Oryza sativa Indica
Group
Length = 117
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 32 aaaaaaccaacctagtaccggatgtgacatgttctagtacta 73
|||||||||||||||||| |||||||||| | |||||||||
Sbjct: 96 aaaaaaccaacctagtactggatgtgacacatcctagtacta 55
>RF00906;MIR1122;AC134925.4/86794-86934 39947:Oryza sativa Japonica
Group
Length = 141
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 113 aatatgttacatctggtcctagattcgttttttatgggacggagggagta 162
||||||| ||||| ||| ||||||||||||||||| ||||||||||||
Sbjct: 54 aatatgtcacatccggtattagattcgttttttatgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 gttttttatgggacggagggagta 162
||||||||||||||||||||||||
Sbjct: 114 gttttttatgggacggagggagta 137
>RF00906;MIR1122;AAAA02036878.1/803-666 39946:Oryza sativa Indica
Group
Length = 138
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 129 tcctagattcgttttttatgggacggagggagta 162
|||||| || ||||||||||||||||||||||||
Sbjct: 101 tcctaggttggttttttatgggacggagggagta 134
>RF00906;MIR1122;AAAA02031253.1/370-507 39946:Oryza sativa Indica
Group
Length = 138
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 129 tcctagattcgttttttatgggacggagggagta 162
|||||| || ||||||||||||||||||||||||
Sbjct: 101 tcctaggttggttttttatgggacggagggagta 134
>RF00906;MIR1122;AP008217.1/27843705-27843861 39947:Oryza sativa
Japonica Group
Length = 157
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 90 tatgtccagattcatcgtactagaatatgt 119
||||||||||||||| ||||||||||||||
Sbjct: 81 tatgtccagattcatagtactagaatatgt 110
>RF00906;MIR1122;AAAA02030593.1/3842-3702 39946:Oryza sativa
Indica Group
Length = 141
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 32 aaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatct 80
||||||| || ||||||| ||||||||||| | |||||||||| |||||
Sbjct: 21 aaaaaacgaatctagtactggatgtgacatatactagtactacgaatct 69
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 94 tccagattcatcgtactagaatatgttacatctggtcctagattcgtttttt 145
||||||||| | ||||||| |||||| ||||| || |||||||||||||||
Sbjct: 72 tccagattcgtagtactagtatatgtcacatccagtactagattcgtttttt 21
Score = 44.1 bits (22), Expect = 6e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 131 ctagattcgtttt-ttatgggacggagggagtac 163
||||||||||||| ||||||||| ||||||||||
Sbjct: 105 ctagattcgtttttttatgggacagagggagtac 138
>RF00906;MIR1122;AP008218.1/22974465-22974372 39947:Oryza sativa
Japonica Group
Length = 94
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 139 gttttttatgggacggagggagtac 163
|||||||||||||||||||||||||
Sbjct: 67 gttttttatgggacggagggagtac 91
>RF00906;MIR1122;AACV01006536.1/39247-39091 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 39 caacctagtaccggatgtgacatgttctagtactacaaatctaga 83
||||||||||||||||||||||| | |||||| || ||||||||
Sbjct: 29 caacctagtaccggatgtgacatctaatagtacaacgaatctaga 73
>RF00906;MIR1122;AACV01018687.1/6312-6175 39947:Oryza sativa
Japonica Group
Length = 138
Score = 50.1 bits (25), Expect = 1e-05
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 128 gtcctagattcgttttttatgggacggagggagtaca 164
||||||||||| ||||| |||||||||||||||||||
Sbjct: 38 gtcctagattcattttt-atgggacggagggagtaca 3
>RF00906;MIR1122;AP008214.1/23959479-23959591 39947:Oryza sativa
Japonica Group
Length = 113
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 139 gttttttatgggacggagggagtac 163
|||||||||||||||||||||||||
Sbjct: 86 gttttttatgggacggagggagtac 110
>RF00906;MIR1122;AC138001.2/59407-59266 39947:Oryza sativa Japonica
Group
Length = 142
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 110 tagaatatgttacatctggtcctagattcgttttttatgggacggagggagta 162
|||||| ||| ||||| || ||||||| |||||||||||||| |||||||||
Sbjct: 86 tagaatgtgtcacatccagtactagattggttttttatgggacagagggagta 138
>RF00906;MIR1122;AAAA02029602.1/21868-22024 39946:Oryza sativa
Indica Group
Length = 157
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 90 tatgtccagattcatcgtactagaatatgttacatc 125
||||||||||||||| ||||||| |||||| |||||
Sbjct: 81 tatgtccagattcattgtactaggatatgtcacatc 116
>RF00906;MIR1122;AP008208.1/277556-277420 39947:Oryza sativa
Japonica Group
Length = 137
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 139 gttttttatgggacggagggagta 162
||||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagta 5
>RF00906;MIR1122;AAAA02026860.1/4609-4722 39946:Oryza sativa Indica
Group
Length = 114
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 gttttttatgggacggagggagta 162
||||||||||||||||||||||||
Sbjct: 87 gttttttatgggacggagggagta 110
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 140 ttttttatgggacggagggagta 162
|||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagta 5
>RF00906;MIR1122;AC229932.1/30140-30028 63629:Oryza minuta
Length = 113
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 gttttttatgggacggagggagta 162
||||||||||||||||||||||||
Sbjct: 86 gttttttatgggacggagggagta 109
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 140 ttttttatgggacggagggagta 162
|||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagta 5
>RF00906;MIR1122;AACV01012113.1/55186-55058 39947:Oryza sativa
Japonica Group
Length = 129
Score = 48.1 bits (24), Expect = 4e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 92 tgtccagattcatcgtactagaatatgttacatctggtcctagattcgtttttt-atggg 150
||||||||||| | |||||| || ||| ||||| || ||||||| ||||||| |||||
Sbjct: 76 tgtccagattcgtagtactaagatgtgtcacatcccgtactagatttgtttttttatggg 17
Query: 151 acggagggagta 162
||||||||||||
Sbjct: 16 acggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 gttttttatgggacggagggagta 162
||||||||||||||||||||||||
Sbjct: 102 gttttttatgggacggagggagta 125
>RF00906;MIR1122;AACV01025590.1/274-429 39947:Oryza sativa Japonica
Group
Length = 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 gttttttatgggacggagggagta 162
||||||||||||||||||||||||
Sbjct: 129 gttttttatgggacggagggagta 152
>RF00906;MIR1122;AP008209.1/30325748-30325904 39947:Oryza sativa
Japonica Group
Length = 157
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 91 atgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatggg 150
|||||||||||||| |||||| | ||| ||||| ||| ||||||| | | |||||||
Sbjct: 82 atgtccagattcattgtactatgaagtgtcacatccggtactagattgttatattatggg 141
Query: 151 acggagggagta 162
||||||||||||
Sbjct: 142 acggagggagta 153
>RF00906;MIR1122;AAAA02012853.1/6255-6365 39946:Oryza sativa Indica
Group
Length = 111
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 140 ttttttatgggacggagggagtac 163
||||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagtac 4
>RF00906;MIR1122;AACV01016857.1/872-736 39947:Oryza sativa Japonica
Group
Length = 137
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 gttttttatgggacggagggagta 162
||||||||||||||||||||||||
Sbjct: 110 gttttttatgggacggagggagta 133
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 44 tagtaccggatgtgacatgttctagtactacaaatctagacat 86
|||||| |||||||||| ||||||||||| |||| |||||||
Sbjct: 108 tagtactggatgtgacacattctagtactataaatttagacat 66
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 101 tcatcgtactagaatatgttacatctggtcctagattcgttttttatgggacggagggag 160
|||| |||||||||||||| ||||| || |||||| | |||||| || ||||||||||
Sbjct: 66 tcattgtactagaatatgtcacatcccgttctagatacattttttccggcacggagggag 7
Query: 161 ta 162
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AAAA02014383.1/51051-51164 39946:Oryza sativa
Indica Group
Length = 114
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 gttttttatgggacggagggagta 162
||||||||||||||||||||||||
Sbjct: 87 gttttttatgggacggagggagta 110
>RF00906;MIR1122;AACV01003164.1/19294-19158 39947:Oryza sativa
Japonica Group
Length = 137
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 gttttttatgggacggagggagta 162
||||||||||||||||||||||||
Sbjct: 110 gttttttatgggacggagggagta 133
>RF00906;MIR1122;AP008217.1/3396232-3396120 39947:Oryza sativa
Japonica Group
Length = 113
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 gttttttatgggacggagggagta 162
||||||||||||||||||||||||
Sbjct: 86 gttttttatgggacggagggagta 109
>RF00906;MIR1122;AAAA02010127.1/111408-111296 39946:Oryza sativa
Indica Group
Length = 113
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 gttttttatgggacggagggagta 162
||||||||||||||||||||||||
Sbjct: 86 gttttttatgggacggagggagta 109
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 140 ttttttatgggacggagggagta 162
|||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagta 5
>RF00906;MIR1122;AP008207.1/1012082-1012198 39947:Oryza sativa
Japonica Group
Length = 117
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 92 tgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatggga 151
|||||| |||| | ||||||| | |||| |||| |||||||| ||| | | ||||||||
Sbjct: 75 tgtccaaattcgtagtactaggaaatgtcccatccggtcctaggttcttatattatggga 16
Query: 152 cggagggagtac 163
||||||||||||
Sbjct: 15 cggagggagtac 4
>RF00906;MIR1122;AP004457.2/96948-96835 39947:Oryza sativa Japonica
Group
Length = 114
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 gttttttatgggacggagggagta 162
||||||||||||||||||||||||
Sbjct: 87 gttttttatgggacggagggagta 110
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 140 ttttttatgggacggagggagta 162
|||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagta 5
>RF00906;MIR1122;AP004636.3/36389-36234 39947:Oryza sativa Japonica
Group
Length = 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 90/112 (80%)
Strand = Plus / Minus
Query: 51 ggatgtgacatgttctagtactacaaatctagacatacatatgtccagattcatcgtact 110
||||||||||| | |||| || | |||||| |||| | | ||||||||||| | |||||
Sbjct: 116 ggatgtgacatctcctagcacaataaatctggacagtcctttgtccagattcgttgtact 57
Query: 111 agaatatgttacatctggtcctagattcgttttttatgggacggagggagta 162
|||| |||| ||||| |||||| || ||||| ||||||||||||||||
Sbjct: 56 agaaaatgtcacatcccttcctaggtttagtttttttgggacggagggagta 5
>RF00906;MIR1122;AP008213.1/18823070-18823167 39947:Oryza sativa
Japonica Group
Length = 98
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 26 tcccacaaaaaaccaacctagtaccggatgtg 57
||||| ||||||||||||||| ||||||||||
Sbjct: 83 tcccataaaaaaccaacctagaaccggatgtg 52
>RF00906;MIR1122;AP004012.3/83493-83639 39947:Oryza sativa Japonica
Group
Length = 147
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 131 ctagattcgttttttatgggacggagggagta 162
|||| |||||||||||| ||||||||||||||
Sbjct: 36 ctaggttcgttttttataggacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 139 gttttttatgggacggagggagta 162
||||||||||||||||||||||||
Sbjct: 120 gttttttatgggacggagggagta 143
>RF00906;MIR1122;AP006067.3/111180-111270 39947:Oryza sativa
Japonica Group
Length = 91
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 139 gttttttatgggacggagggagta 162
||||||||||||||||||||||||
Sbjct: 28 gttttttatgggacggagggagta 5
>RF00906;MIR1122;AAAA02020131.1/32717-32877 39946:Oryza sativa
Indica Group
Length = 161
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 51 ggatgtgacatgttctagtactacaaatctagaca 85
||||| ||||| |||||||||||||||||| ||||
Sbjct: 121 ggatgggacattttctagtactacaaatctggaca 87
>RF00906;MIR1122;AAAA02014213.1/40463-40591 39946:Oryza sativa
Indica Group
Length = 129
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 40 aacctagtaccggatgtgacatgttctagtactacaaatctagacatacat 90
||||||| | |||||| ||||| | |||||||||||||||| |||| ||||
Sbjct: 30 aacctaggatcggatgggacatttcctagtactacaaatctggacagacat 80
>RF00906;MIR1122;AAAA02007310.1/1161-1273 39946:Oryza sativa Indica
Group
Length = 113
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 140 ttttttatgggacggagggagta 162
|||||||||||||||||||||||
Sbjct: 27 ttttttatgggacggagggagta 5
>RF00906;MIR1122;AL442105.2/58754-58619 4530:Oryza sativa (rice)
Length = 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 51 ggatgtgacatgttctagtactacaaatctagaca 85
|||||||||||||| |||||||| ||||||||||
Sbjct: 41 ggatgtgacatgttttagtactatgaatctagaca 75
>RF00906;MIR1122;AAAA02004858.1/41238-41369 39946:Oryza sativa
Indica Group
Length = 132
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 139 gttttttatgggacggagggagtacac 165
||||||| |||||||||||||||||||
Sbjct: 105 gttttttttgggacggagggagtacac 131
>RF00906;MIR1122;AP008216.1/11618978-11618822 39947:Oryza sativa
Japonica Group
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 57/67 (85%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 51 ggatgtgacatgttctagtactacaaatctagacataca-tatgtccagattcatcgtac 109
||||||||| | |||||||||||| ||||| |||| | |||||| |||||||| ||||
Sbjct: 41 ggatgtgacgtattctagtactacgaatctggacaaggagtatgtctagattcatagtac 100
Query: 110 tagaata 116
|||||||
Sbjct: 101 tagaata 107
>RF00906;MIR1122;AACV01023991.1/17005-17122 39947:Oryza sativa
Japonica Group
Length = 118
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 132 tagattcgttttttatgggacggagggagta 162
|||||| |||||||||||||||||| |||||
Sbjct: 35 tagatttgttttttatgggacggagagagta 5
>RF00906;MIR1122;AAAA02033498.1/22640-22523 39946:Oryza sativa
Indica Group
Length = 118
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 132 tagattcgttttttatgggacggagggagta 162
|||||| |||||||||||||||||| |||||
Sbjct: 35 tagatttgttttttatgggacggagagagta 5
>RF00906;MIR1122;AP008210.1/24400869-24400741 39947:Oryza sativa
Japonica Group
Length = 129
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 40 aacctagtaccggatgtgacatgttctagtactacaaatctagacatacat 90
||||||| | |||||| ||||| | |||||||||||||||| |||| ||||
Sbjct: 100 aacctaggatcggatgagacatttcctagtactacaaatctggacagacat 50
>RF00906;MIR1122;AAAA02003495.1/21560-21672 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 140 ttttttatgggacggagggagta 162
|||||||||||||||||||||||
Sbjct: 87 ttttttatgggacggagggagta 109
>RF00906;MIR1122;AP008208.1/29387042-29386887 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 42 cctagtaccggatgtgacatgttctagtactacaaatctagacatacatatgtccagatt 101
|||||||| ||||||||||| || |||||| | ||||||||||| | ||||||||||
Sbjct: 32 cctagtactggatgtgacattttatagtacaatgaatctagacatcctcctgtccagatt 91
Query: 102 cat 104
|||
Sbjct: 92 cat 94
>RF00906;MIR1122;AL713933.6/72988-73123 4530:Oryza sativa (rice)
Length = 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 92 tgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatggga 151
||||||||||| | ||||||| | |||| ||||||||||||| ||| | | || |||||
Sbjct: 75 tgtccagattcgtagtactaggaaatgtcccatctggtcctaggttcttatattttggga 16
Query: 152 cggagggagta 162
||||||||||
Sbjct: 15 tggagggagta 5
>RF00906;MIR1122;AP006461.3/116161-116316 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 39 caacctagtaccggatgtgacat 61
|||||||||||||||||||||||
Sbjct: 29 caacctagtaccggatgtgacat 51
>RF00906;MIR1122;AL606632.5/91694-91591 4530:Oryza sativa (rice)
Length = 104
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 138 cgttttttatgggacggagggagtaca 164
|||||||| ||||||||||||||||||
Sbjct: 29 cgttttttttgggacggagggagtaca 3
>RF00906;MIR1122;AAAA02011966.1/4807-4962 39946:Oryza sativa
Indica Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 50 cggatgtgacatgttctagtactacaaatct 80
|||||||||||| ||||||||||||| ||||
Sbjct: 39 cggatgtgacattttctagtactacacatct 69
>RF00906;MIR1122;AACV01010016.1/10165-10293 39947:Oryza sativa
Japonica Group
Length = 129
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 40 aacctagtaccggatgtgacatgttctagtactacaaatctagacatacat 90
||||||| | |||||| ||||| | |||||||||||||||| |||| ||||
Sbjct: 30 aacctaggatcggatgagacatttcctagtactacaaatctggacagacat 80
>RF00906;MIR1122;AL606691.4/149690-149555 39947:Oryza sativa
Japonica Group
Length = 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 51 ggatgtgacatgttctagtactacaaatctagaca 85
||||||||||| ||||||||||| ||||||||||
Sbjct: 41 ggatgtgacatattctagtactatgaatctagaca 75
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 92 tgtccagattcatcgtactagaatatgttacatc 125
|||| |||||||| |||||||||||||| |||||
Sbjct: 75 tgtctagattcatagtactagaatatgtcacatc 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 51 ggatgtgacatgttctagtact 72
||||||||||||||||||||||
Sbjct: 96 ggatgtgacatgttctagtact 75
>RF00906;MIR1122;AP008207.1/298223-298350 39947:Oryza sativa
Japonica Group
Length = 128
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 39 caacctagtaccggatgtgacat 61
|||||||||||||||||||||||
Sbjct: 100 caacctagtaccggatgtgacat 78
>RF00906;MIR1122;AAAA02004369.1/19477-19347 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 6e-04
Identities = 53/61 (86%), Gaps = 3/61 (4%)
Strand = Plus / Plus
Query: 25 gtcccacaaaaaaccaacctagtaccggatgtgacatgttctagtactacaaatctagac 84
|||||| ||||||| | |||||||| |||||||||| | |||||||||| |||||||||
Sbjct: 15 gtcccataaaaaacaagcctagtac-ggatgtgaca--tcctagtactacgaatctagac 71
Query: 85 a 85
|
Sbjct: 72 a 72
>RF00906;MIR1122;AP008210.1/21312078-21312173 39947:Oryza sativa
Japonica Group
Length = 96
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 39 caacctagtaccggatgtgacatgttctagtact 72
||||||||||||||||| ||||| || |||||||
Sbjct: 68 caacctagtaccggatgagacatcttatagtact 35
>RF00906;MIR1122;AAAA02022617.1/34247-34092 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 144 ttatgggacggagggagtacac 165
||||||||||||||||||||||
Sbjct: 23 ttatgggacggagggagtacac 2
>RF00906;MIR1122;AAAA02034725.1/24676-24788 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 122 catctggtcctagattcgttttttatgggacggagggagtac 163
||||||||||||| ||| | | || |||||||||||||||||
Sbjct: 69 catctggtcctaggttcttatattttgggacggagggagtac 110
>RF00906;MIR1122;AAAA02025478.1/8099-8171 39946:Oryza sativa Indica
Group
Length = 73
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 131 ctagattcgttttttatgggacggagggagtaca 164
||||||| ||||||| |||||||||||||||||
Sbjct: 38 ctagattggtttttttggggacggagggagtaca 71
>RF00906;MIR1122;AAAA02010753.1/12998-13107 39946:Oryza sativa
Indica Group
Length = 110
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 139 gttttttatgggacggagggagtaca 164
||||||| ||||||||||||||||||
Sbjct: 83 gttttttttgggacggagggagtaca 108
>RF00906;MIR1122;AACV01010712.1/16660-16524 39947:Oryza sativa
Japonica Group
Length = 137
Score = 44.1 bits (22), Expect = 6e-04
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 39 caacctagtaccggatgtgacatgttctagtactacaaatct 80
||||||||||| ||||||||||| |||||| ||||| |||||
Sbjct: 30 caacctagtac-ggatgtgacatattctaggactacgaatct 70
>RF00906;MIR1122;AAAA02003552.1/15634-15476 39946:Oryza sativa
Indica Group
Length = 159
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 41 acctagtaccggatgtgacatgttctagtactacaaat 78
||||||||| ||||||||||| ||||||||||||||
Sbjct: 129 acctagtacaggatgtgacattacctagtactacaaat 92
>RF00906;MIR1122;CR855173.1/25497-25408 4530:Oryza sativa (rice)
Length = 90
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 25 gtcccacaaaaaaccaacctag 46
||||||||||||||||||||||
Sbjct: 76 gtcccacaaaaaaccaacctag 55
>RF00906;MIR1122;AP008211.1/18929382-18929520 39947:Oryza sativa
Japonica Group
Length = 139
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 142 ttttatgggacggagggagtac 163
||||||||||||||||||||||
Sbjct: 25 ttttatgggacggagggagtac 4
>RF00906;MIR1122;AACV01022224.1/5549-5409 39947:Oryza sativa
Japonica Group
Length = 141
Score = 44.1 bits (22), Expect = 6e-04
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 131 ctagattcgtttt-ttatgggacggagggagtac 163
||||||||||||| ||||||||| ||||||||||
Sbjct: 105 ctagattcgtttttttatgggacagagggagtac 138
>RF00906;MIR1122;AP004840.3/92920-92794 39947:Oryza sativa Japonica
Group
Length = 127
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 121 acatctggtcctagattcgttttttatgggacggagggagta 162
|||||| || |||| || ||||||||||||| ||||||||||
Sbjct: 82 acatcttgtactaggtttgttttttatgggatggagggagta 123
>RF00906;MIR1122;AAAA02018982.1/10233-10100 39946:Oryza sativa
Indica Group
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 130 cctagattcgttttttatgggacggagggagtac 163
||||| || ||||||| |||||||||||||||||
Sbjct: 98 cctaggttggttttttgtgggacggagggagtac 131
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 25 gtcccacaaaaaaccaacctag 46
||||||||||||||||||||||
Sbjct: 120 gtcccacaaaaaaccaacctag 99
>RF00906;MIR1122;CR855052.1/5895-5769 4530:Oryza sativa (rice)
Length = 127
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 92 tgtccagattcatcgtactagaatatgttacatc 125
||||||||||||| |||||||| ||||| |||||
Sbjct: 58 tgtccagattcattgtactagattatgtcacatc 91
>RF00906;MIR1122;AACV01006104.1/16306-16436 39947:Oryza sativa
Japonica Group
Length = 131
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 139 gttttttatgggacggagggagtaca 164
||||||| ||||||||||||||||||
Sbjct: 28 gttttttttgggacggagggagtaca 3
>RF00906;MIR1122;AAAA02028278.1/9457-9588 39946:Oryza sativa Indica
Group
Length = 132
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 129 tcctagattcgttttttatgggacggagggagta 162
|||||| || ||||||| ||||||||||||||||
Sbjct: 38 tcctaggttagttttttttgggacggagggagta 5
>RF00906;MIR1122;AAAA02028867.1/14372-14216 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 92 tgtccagattcatcgtactagaatatgttacatctggtcctagattcgttttttatggga 151
|||| |||||||| ||||||| |||||| ||| |||||||| || | | || |||||
Sbjct: 83 tgtctagattcatagtactaggatatgtccaatccggtcctaggttgctatattctggga 142
Query: 152 cggagggagtacac 165
||||||||||||||
Sbjct: 143 cggagggagtacac 156
>RF00906;MIR1122;AP008211.1/6609928-6610066 39947:Oryza sativa
Japonica Group
Length = 139
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 92 tgtccagattcatcgtactagaatatgttacatc 125
|||||||||||||| |||||| || |||||||||
Sbjct: 65 tgtccagattcatcatactaggatgtgttacatc 98
>RF00906;MIR1122;AC144738.2/99574-99421 39947:Oryza sativa
Japonica Group
Length = 154
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 tctagtactacaaatctagaca 85
||||||||||||||||||||||
Sbjct: 54 tctagtactacaaatctagaca 75
>RF00906;MIR1122;AP008215.1/17611882-17611726 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 144 ttatgggacggagggagtacac 165
||||||||||||||||||||||
Sbjct: 135 ttatgggacggagggagtacac 156
>RF00906;MIR1122;AL606656.3/84170-84034 39947:Oryza sativa Japonica
Group
Length = 137
Score = 44.1 bits (22), Expect = 6e-04
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 39 caacctagtaccggatgtgacatgttctagtactacaaatct 80
||||||||||| ||||||||||| |||||| ||||| |||||
Sbjct: 108 caacctagtac-ggatgtgacatattctaggactacgaatct 68
>RF00906;MIR1122;AP008212.1/26495633-26495543 39947:Oryza sativa
Japonica Group
Length = 91
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 123 atctggtcctagattcgttttttatgggacggagggagtaca 164
||||||| ||||||| | | |||||||||||||||||||||
Sbjct: 48 atctggtactagattgctatattatgggacggagggagtaca 89
>RF00906;MIR1122;AL845346.4/42836-42971 4530:Oryza sativa (rice)
Length = 136
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 93 gtccagattcatcgtactagaa 114
||||||||||||||||||||||
Sbjct: 74 gtccagattcatcgtactagaa 53
>RF00906;MIR1122;AP003508.3/31246-31125 39947:Oryza sativa Japonica
Group
Length = 122
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 92 tgtccagattcatcgtactagaatatgttacatc 125
||||||||||||||||||||| || ||| |||||
Sbjct: 75 tgtccagattcatcgtactaggatgtgtcacatc 42
