miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>49004_osa-miR442:pmrd
          Length = 233

 Score =  178 bits (90), Expect = 6e-46
 Identities = 105/110 (95%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtaaactgcgagacgaatttattaagcctaaataatccgttattagcaaatgtttactgt 60
           ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 176 gtaaactgcgagacgaatttattaagcctaattaatccgtcattagcaaatgtttactgt 117

                                                             
Query: 61  agcaacacattgttaaatcatggagcaattaggcttaaaagattcgtctc 110
           |||| |||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 116 agcaccacattgtcagatcatggagcaattaggcttaaaagattcgtctc 67




>50895_osa-miRf11680-akr:pmrd
          Length = 145

 Score =  139 bits (70), Expect = 5e-34
 Identities = 100/110 (90%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtaaactgcgagacgaatttattaagcctaaataatccgttattagcaaatgtttactgt 60
           |||||| |||||||||||||||||||||||| |||||| | ||||||||||||||||| |
Sbjct: 131 gtaaaccgcgagacgaatttattaagcctaattaatccatcattagcaaatgtttacttt 72

                                                             
Query: 61  agcaacacattgttaaatcatggagcaattaggcttaaaagattcgtctc 110
           |||| |||||||| |||| |||| ||||||||||||||||||| ||||||
Sbjct: 71  agcaccacattgtcaaattatggtgcaattaggcttaaaagatccgtctc 22




>50149_osa-miRf10934-akr:pmrd
          Length = 143

 Score =  111 bits (56), Expect = 1e-25
 Identities = 86/96 (89%)
 Strand = Plus / Minus

                                                                       
Query: 15  gaatttattaagcctaaataatccgttattagcaaatgtttactgtagcaacacattgtt 74
           |||||||| |||||||| |||||||| ||||||||||||||| |||| ||  ||||||||
Sbjct: 116 gaatttatgaagcctaattaatccgtcattagcaaatgtttattgtaccacaacattgtt 57

                                               
Query: 75  aaatcatggagcaattaggcttaaaagattcgtctc 110
           |||| |||| |||||||||| |||||||||||||||
Sbjct: 56  aaattatggcgcaattaggcctaaaagattcgtctc 21




>49008_osa-miR445a:pmrd
          Length = 268

 Score =  105 bits (53), Expect = 7e-24
 Identities = 92/105 (87%)
 Strand = Plus / Plus

                                                                       
Query: 6   ctgcgagacgaatttattaagcctaaataatccgttattagcaaatgtttactgtagcaa 65
           ||||||||||||||| |||||||||| |||||| | ||||  ||| ||||||||||||| 
Sbjct: 80  ctgcgagacgaattttttaagcctaattaatccataattatgaaaagtttactgtagcat 139

                                                        
Query: 66  cacattgttaaatcatggagcaattaggcttaaaagattcgtctc 110
           |||||||| ||||||||| | |||||| || ||||||||||||||
Sbjct: 140 cacattgtcaaatcatggtgtaattagactcaaaagattcgtctc 184



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 87  aattaggcttaaaagattcgtctc 110
           |||||||||||||| |||||||||
Sbjct: 107 aattaggcttaaaaaattcgtctc 84




>49455_osa-miRf10240-akr:pmrd
          Length = 128

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 3   aaactgcgagacgaatttattaagcctaaataatccgttattagcaaatgt 53
           |||| ||||||||||| | || ||||||| |||||||||||||||| ||||
Sbjct: 122 aaaccgcgagacgaatcttttgagcctaattaatccgttattagcacatgt 72



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 87  aattaggcttaaaagattcgtctc 110
           ||||||||| ||||||||||||||
Sbjct: 92  aattaggctcaaaagattcgtctc 115




>49010_osa-miR445c:pmrd
          Length = 260

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 76  aatcatggagcaattaggcttaaaagattcgtctc 110
           |||||||| | ||||||||||||||||||||||||
Sbjct: 138 aatcatggtgtaattaggcttaaaagattcgtctc 172



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 6   ctgcgagacgaatttattaagcctaaataatcc 38
           ||||||||||||||| |||||||||| ||||||
Sbjct: 85  ctgcgagacgaattttttaagcctaattaatcc 117



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 87  aattaggcttaaaagattcgtctc 110
           |||||||||||||| |||||||||
Sbjct: 112 aattaggcttaaaaaattcgtctc 89




>49015_osa-miR445h:pmrd
          Length = 277

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 6   ctgcgagacgaatttattaagcctaaataatcc 38
           ||||||||||||||| |||||||||| ||||||
Sbjct: 93  ctgcgagacgaattttttaagcctaattaatcc 125



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 87  aattaggcttaaaagattcgtctc 110
           |||||||||||||| |||||||||
Sbjct: 120 aattaggcttaaaaaattcgtctc 97




>49014_osa-miR445g:pmrd
          Length = 275

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 6   ctgcgagacgaatttattaagcctaaataatcc 38
           ||||||||||||||| |||||||||| ||||||
Sbjct: 92  ctgcgagacgaattttttaagcctaattaatcc 124



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 87  aattaggcttaaaagattcgtctc 110
           |||||||||||||| |||||||||
Sbjct: 119 aattaggcttaaaaaattcgtctc 96




>49012_osa-miR445e:pmrd
          Length = 265

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 6   ctgcgagacgaatttattaagcctaaataatcc 38
           ||||||||||||||| |||||||||| ||||||
Sbjct: 87  ctgcgagacgaattttttaagcctaattaatcc 119



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 87  aattaggcttaaaagattcgtctc 110
           |||||||||||||| |||||||||
Sbjct: 114 aattaggcttaaaaaattcgtctc 91




>50021_osa-miRf10806-akr:pmrd
          Length = 123

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 87  aattaggcttaaaagattcgtctc 110
           ||||||||||||||||||||||||
Sbjct: 91  aattaggcttaaaagattcgtctc 114



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                             
Query: 3  aaactgcgagacgaatttattaagcctaaataatccgttattagcaaatgt 53
          |||| ||||||||||| | || ||||||| |||||||| ||||||| ||||
Sbjct: 3  aaaccgcgagacgaatcttttgagcctaattaatccgtcattagcacatgt 53



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 87  aattaggcttaaaagattcgtctc 110
           ||||||||| ||||||||||||||
Sbjct: 33  aattaggctcaaaagattcgtctc 10




>51249_osa-miRf12034-akr:pmrd
          Length = 121

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 76  aatcatggagcaattaggcttaaaagattcgtct 109
           |||||||||  ||||||||| |||||||||||||
Sbjct: 45  aatcatggactaattaggctcaaaagattcgtct 12




>49009_osa-miR445b:pmrd
          Length = 264

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 6   ctgcgagacgaatttattaagcctaaataatcc 38
           |||||||||||| || |||||||||| ||||||
Sbjct: 86  ctgcgagacgaactttttaagcctaattaatcc 118




>51000_osa-miRf11785-akr:pmrd
          Length = 128

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 87  aattaggcttaaaagattcgtctc 110
           ||||||||| ||||||||||||||
Sbjct: 37  aattaggctcaaaagattcgtctc 14




>50516_osa-miRf11301-akr:pmrd
          Length = 139

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 87  aattaggcttaaaagattcgtctc 110
           ||||||||| ||||||||||||||
Sbjct: 44  aattaggctcaaaagattcgtctc 67




>49733_osa-miRf10518-akr:pmrd
          Length = 122

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 87  aattaggcttaaaagattcgtctc 110
           ||||||||| ||||||||||||||
Sbjct: 34  aattaggctcaaaagattcgtctc 11



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 87  aattaggcttaaaagattcgtctc 110
           ||||||||| ||||||||||||||
Sbjct: 89  aattaggctcaaaagattcgtctc 112