miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>49080_osa-miR819i:pmrd
Length = 198
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 9 tcctctgtttcatattataagattttctagcatt 42
||||| ||||||||||||||||||||||||||||
Sbjct: 176 tcctccgtttcatattataagattttctagcatt 143
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 118 tagaaagtcttataacctgaaacggagg 145
||||||||||||||||||||||||||||
Sbjct: 59 tagaaagtcttataacctgaaacggagg 32
>49073_osa-miR819b:pmrd
Length = 166
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 9 tcctctgtttcatattataagattttctagcattatc 45
||||| |||||||||||||||| ||||||||||||||
Sbjct: 156 tcctccgtttcatattataagactttctagcattatc 120
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 118 tagaaagtcttataacctgaaacggagg 145
||||||||||||||||||||||||||||
Sbjct: 39 tagaaagtcttataacctgaaacggagg 12
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 118 tagaaagtcttataacctgaaacggagg 145
||||||||||||||| |||||||||||
Sbjct: 128 tagaaagtcttataatatgaaacggagg 155
>49082_osa-miR819k:pmrd
Length = 156
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 118 tagaaagtcttataacctgaaacggagg 145
||||||||||||||||||||||||||||
Sbjct: 34 tagaaagtcttataacctgaaacggagg 7
Score = 56.0 bits (28), Expect = 8e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 9 tcctctgtttcatattataagattttctagcattatccac 48
||||| |||||||||||||||| ||||||||||| |||||
Sbjct: 151 tcctccgtttcatattataagactttctagcattgtccac 112
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 118 tagaaagtcttataacctgaaacggagg 145
||||||||||||||| |||||||||||
Sbjct: 123 tagaaagtcttataatatgaaacggagg 150
>49081_osa-miR819j:pmrd
Length = 175
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 118 tagaaagtcttataacctgaaacggagg 145
||||||||||||||||||||||||||||
Sbjct: 45 tagaaagtcttataacctgaaacggagg 18
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 9 tcctctgtttcatattataagattttctagcatt 42
||||| |||||||||||||| | |||||||||||
Sbjct: 162 tcctccgtttcatattataaaactttctagcatt 129
>49077_osa-miR819f:pmrd
Length = 144
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 118 tagaaagtcttataacctgaaacggagg 145
||||||||||||||||||||||||||||
Sbjct: 28 tagaaagtcttataacctgaaacggagg 1
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 10 cctctgtttcatattataagattttctagcattatcca 47
|||| |||||||||||||| ||||||||||||| ||||
Sbjct: 144 cctccgtttcatattataaaattttctagcattgtcca 107
>49076_osa-miR819e:pmrd
Length = 154
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 118 tagaaagtcttataacctgaaacggagg 145
||||||||||||||||||||||||||||
Sbjct: 33 tagaaagtcttataacctgaaacggagg 6
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 9 tcctctgtttcatattataagattttctagcatt 42
||||| |||||||||||||||| |||||||||||
Sbjct: 150 tcctccgtttcatattataagactttctagcatt 117
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 118 tagaaagtcttataacctgaaacggagg 145
||||||||||||||| |||||||||||
Sbjct: 122 tagaaagtcttataatatgaaacggagg 149
>49075_osa-miR819d:pmrd
Length = 152
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 118 tagaaagtcttataacctgaaacggagg 145
||||||||||||||||||||||||||||
Sbjct: 34 tagaaagtcttataacctgaaacggagg 7
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 118 tagaaagtcttataacctgaaacggagg 145
||||||||||||||||||||||||||||
Sbjct: 119 tagaaagtcttataacctgaaacggagg 146
>49074_osa-miR819c:pmrd
Length = 154
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 118 tagaaagtcttataacctgaaacggagg 145
||||||||||||||||||||||||||||
Sbjct: 33 tagaaagtcttataacctgaaacggagg 6
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 9 tcctctgtttcatattataagattttctagcatt 42
||||| ||||||||||||||| |||||||||||
Sbjct: 150 tcctccgtttcatattataaggctttctagcatt 117
>49072_osa-miR819a:pmrd
Length = 125
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 118 tagaaagtcttataacctgaaacggagg 145
||||||||||||||||||||||||||||
Sbjct: 28 tagaaagtcttataacctgaaacggagg 1
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 10 cctctgtttcatattataagattttctagcatt 42
|||| |||||||||||||||| |||||||||||
Sbjct: 125 cctccgtttcatattataagactttctagcatt 93
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 118 tagaaagtcttataacctgaaacggagg 145
||||||||||||||| |||||||||||
Sbjct: 98 tagaaagtcttataatatgaaacggagg 125
>49079_osa-miR819h:pmrd
Length = 155
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 118 tagaaagtcttataacctgaaacggag 144
|||||||||||||||||||||||||||
Sbjct: 34 tagaaagtcttataacctgaaacggag 8
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 119 agaaagtcttataacctgaaacggagg 145
|||||||||||||||||||||||||||
Sbjct: 124 agaaagtcttataacctgaaacggagg 150
>49078_osa-miR819g:pmrd
Length = 147
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 118 tagaaagtcttataacctgaaacgga 143
||||||||||||||||||||||||||
Sbjct: 30 tagaaagtcttataacctgaaacgga 5
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 9 tcctctgtttcatattataagattttctagcattatccac 48
||||| |||||||||||||||| |||||| ||||| ||||
Sbjct: 147 tcctccgtttcatattataagactttctaacattacccac 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 114 atgttagaaagtcttataacctgaaacggagg 145
||||||||||||||||||| |||||||||||
Sbjct: 115 atgttagaaagtcttataatatgaaacggagg 146
>51211_osa-miRf11996-akr:pmrd
Length = 110
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 118 tagaaagtcttataacctgaaacgg 142
|||||||||||||||||||||||||
Sbjct: 78 tagaaagtcttataacctgaaacgg 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 118 tagaaagtcttataacctgaaacggagg 145
|||||||||||||||||||||| |||||
Sbjct: 33 tagaaagtcttataacctgaaatggagg 6
>50523_osa-miRf11308-akr:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 17 ttcatattataagattttctagcatt 42
|||||||||||||| |||||||||||
Sbjct: 86 ttcatattataagactttctagcatt 61
