miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>32573_mmu-mir-3470a:mirbase
          Length = 77

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 132 ccagcactcatgaggcagaggctggcagatctctgtgaattt 173
           |||||||||| ||||||||||| ||| |||||||||||||||
Sbjct: 74  ccagcactcaggaggcagaggcaggctgatctctgtgaattt 33




>32440_mmu-mir-1935:mirbase
          Length = 60

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 143 gaggcagaggctggcagatctctg 166
           ||||||||||||||| ||||||||
Sbjct: 7   gaggcagaggctggcggatctctg 30




>32449_mmu-mir-1946a:mirbase
          Length = 134

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 114 tggcacacacttttaatgccagcactcatgaggcagaggc 153
           ||||||||||||||||| ||| ||||  ||||||| ||||
Sbjct: 31  tggcacacacttttaatcccaacacttgtgaggcacaggc 70