miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP008216.1/15579713-15579809 39947:Oryza sativa
Japonica Group
Length = 97
Score = 192 bits (97), Expect = 6e-49
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 3 tatctactccctccgtcccaaaataagtcaatcccgtactagtatatgacacttcctagt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatctactccctccgtcccaaaataagtcaatcccgtactagtatatgacacttcctagt 60
Query: 63 acgaggttggtttattttgggacggagagagtagatg 99
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 acgaggttggtttattttgggacggagagagtagatg 97
Score = 54.0 bits (27), Expect = 4e-07
Identities = 78/95 (82%)
Strand = Plus / Minus
Query: 4 atctactccctccgtcccaaaataagtcaatcccgtactagtatatgacacttcctagta 63
|||||||| |||||||||||||||| ||| | |||||||| | || || | ||||||
Sbjct: 96 atctactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatactagta 37
Query: 64 cgaggttggtttattttgggacggagagagtagat 98
|| | ||| |||||||||||||||| ||||||||
Sbjct: 36 cgggattgacttattttgggacggagggagtagat 2
>RF00906;MIR1122;AP003303.4/77673-77577 39947:Oryza sativa
Japonica Group
Length = 97
Score = 113 bits (57), Expect = 4e-25
Identities = 81/89 (91%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataagtcaatcccgtactagtatatgacacttcctagtacga 66
||||||||||||||||||||||| ||| | |||||||||| |||||| |||||||||||
Sbjct: 93 tactccctccgtcccaaaataagccaacctcgtactagtacgtgacacatcctagtacga 34
Query: 67 ggttggtttattttgggacggagagagta 95
|||||| |||||||||||||||| |||||
Sbjct: 33 ggttggcttattttgggacggagggagta 5
Score = 97.6 bits (49), Expect = 3e-20
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagtcaatcccgtactagtatatgacacttcctagtacga 66
||||||||||||||||||||||| ||| | |||||||| || || ||| | |||||||||
Sbjct: 5 tactccctccgtcccaaaataagccaacctcgtactaggatgtgtcacgtactagtacga 64
Query: 67 ggttggtttattttgggacggagagagta 95
|||||| |||||||||||||||| |||||
Sbjct: 65 ggttggcttattttgggacggagggagta 93
>RF00906;MIR1122;AP008212.1/6831401-6831305 39947:Oryza sativa
Japonica Group
Length = 97
Score = 75.8 bits (38), Expect = 1e-13
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcccaaaataagtcaatcccgtactagtatatgacacttcctagtacg 65
|||||||||| ||| ||||||||| |||| |||| ||| || |||||| |||| |||||
Sbjct: 4 ctactccctcggtctcaaaataagctaatctcgtattaggatgtgacacatccttgtacg 63
Query: 66 aggttggtttattttgggacggagagagta 95
||||| ||||||||||||||||| |||||
Sbjct: 64 aggttaatttattttgggacggagggagta 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 74/90 (82%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataagtcaatcccgtactagtatatgacacttcctagtacga 66
|||||||||||||||||||||| | || | ||||| || || || ||| ||||| |||||
Sbjct: 93 tactccctccgtcccaaaataaattaacctcgtacaaggatgtgtcacatcctaatacga 34
Query: 67 ggttggtttattttgggacggagagagtag 96
| || | |||||||| ||| ||| ||||||
Sbjct: 33 gattagcttattttgagaccgagggagtag 4
>RF00906;MIR1122;AACV01001981.1/7100-7193 39947:Oryza sativa
Japonica Group
Length = 94
Score = 71.9 bits (36), Expect = 1e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 56 tcctagtacgaggttggtttattttgggacggagagagta 95
|||||||||||||||||||||||||||||||||| |||||
Sbjct: 44 tcctagtacgaggttggtttattttgggacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 74/89 (83%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagtcaatcccgtactagtatatgacacttcctagtacga 66
|||||||||||||||||||||| ||| | |||||||| || ||||| ||| |||||
Sbjct: 5 tactccctccgtcccaaaataaaccaacctcgtactaggatgtgacatgtcc---tacga 61
Query: 67 ggttggtttattttgggacggagagagta 95
|||| | |||||| ||||||||| |||||
Sbjct: 62 ggtttggttatttcgggacggagggagta 90
>RF00906;MIR1122;AAAA02019539.1/50507-50413 39946:Oryza sativa
Indica Group
Length = 95
Score = 65.9 bits (33), Expect = 9e-11
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 49 tgacacttcctagtacgaggttggtttattttgggacggag 89
|||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 51 tgacacatcctagtaccaggttggtttattttgggacggag 11
>RF00906;MIR1122;AAAA02026943.1/18413-18317 39946:Oryza sativa
Indica Group
Length = 97
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 58 ctagtacgaggttggtttattttgggacggagagagta 95
|||||||||||||||||||||||| ||||||| |||||
Sbjct: 56 ctagtacgaggttggtttattttgagacggagggagta 93
Score = 50.1 bits (25), Expect = 5e-06
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataagtcaatcccgtactagtatatgacacttcctagtacga 66
||||||||||||| |||||||| ||| | ||||||||||| || | || || |||||
Sbjct: 93 tactccctccgtctcaaaataaaccaacctcgtactagtatgtgttccatcgtaatacga 34
Query: 67 ggttggtttattttgggacggagagagta 95
|||||| ||||||| ||| |||| |||||
Sbjct: 33 ggttggcttattttaggatggagggagta 5
>RF00906;MIR1122;AACV01013045.1/9312-9408 39947:Oryza sativa
Japonica Group
Length = 97
Score = 58.0 bits (29), Expect = 2e-08
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagtcaatcccgtactagtatatgacacttcctagtacga 66
||||||||| ||||||||| ||| ||| | ||||||| || || ||| || ||||||||
Sbjct: 5 tactccctctgtcccaaaaaaaggcaacctagtactaggatgtgtcacgtcgtagtacga 64
Query: 67 ggttggtttattttgggacggagagagta 95
||||| || ||||||||||||| |||||
Sbjct: 65 ggttgagtttttttgggacggagggagta 93
Score = 58.0 bits (29), Expect = 2e-08
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataagtcaatcccgtactagtatatgacacttcctagtacga 66
||||||||||||||||||| || |||| | ||||||| | |||||| ||||||||| |
Sbjct: 93 tactccctccgtcccaaaaaaactcaacctcgtactacgacgtgacacatcctagtacta 34
Query: 67 ggttggtttattttgggacggagagagta 95
||||| || ||||||||| ||| |||||
Sbjct: 33 ggttgcctttttttgggacagagggagta 5
>RF00906;MIR1122;AAAA02018379.1/19319-19440 39946:Oryza sativa
Indica Group
Length = 122
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 61 gtacgaggttggtttattttgggacggagagagta 95
||||||| ||||||||||||||||||||| |||||
Sbjct: 84 gtacgagattggtttattttgggacggagggagta 118
Score = 46.1 bits (23), Expect = 9e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataagtcaatcccgtac 41
|||||||||||||||||||||| ||||| |||||
Sbjct: 118 tactccctccgtcccaaaataaaccaatctcgtac 84
>RF00906;MIR1122;AAAA02022585.1/6052-5955 39946:Oryza sativa
Indica Group
Length = 98
Score = 52.0 bits (26), Expect = 1e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataagtcaatcccgtactagtatatgacacttcctagtac 64
||||||||||||||||||| || |||| | ||||||| || |||||| |||||||||
Sbjct: 94 tactccctccgtcccaaaaaaactcaacctcgtactacgatgtgacacatcctagtac 37
Score = 44.1 bits (22), Expect = 3e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 38 gtactagtatatgacacttcctagtacgaggttggtttattttgggacggagagagta 95
||||||| || || ||| || ||||||||||||| || ||||||||||||| |||||
Sbjct: 37 gtactaggatgtgtcacatcgtagtacgaggttgagtttttttgggacggagggagta 94
>RF00906;MIR1122;AAAA02007860.1/10023-9886 39946:Oryza sativa Indica
Group
Length = 138
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 60 agtacgaggttggtttattttgggacggag 89
|||||||| |||||||||||||||||||||
Sbjct: 99 agtacgagattggtttattttgggacggag 128
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa
Japonica Group
Length = 247
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcccaaaataagt 30
|||||||||||||||||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagt 25
>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
Group
Length = 244
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcccaaaataagt 30
|||||||||||||||||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagt 25
>RF01058;MIR806;AAAA02015465.1/824-1069 39946:Oryza sativa Indica
Group
Length = 246
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaataagt 30
|||||||||||||||||||||||||
Sbjct: 246 ctactccctccgtcccaaaataagt 222
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaataagt 30
|||||||||||||||||||||||||
Sbjct: 241 ctactccctccgtcccaaaataagt 217
>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
Group
Length = 245
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcccaaaataagt 30
|||||||||||||||||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagt 25
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa
Indica Group
Length = 245
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcccaaaataagt 30
|||||||||||||||||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagt 25
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcccaaaataagt 30
|||||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaataagt 28
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcccaaaataagt 30
|||||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaataagt 28
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 102 tactccctccgtcccaaaataagt 79
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcccaaaataagt 30
|||||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaataagt 28
>RF00906;MIR1122;AAAA02035057.1/21564-21428 39946:Oryza sativa
Indica Group
Length = 137
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 62 tacgaggttggtttattttgggacggagagagtagat 98
|||||||||||||||||| |||| |||| ||||||||
Sbjct: 100 tacgaggttggtttatttggggatggagggagtagat 136
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 62 tacgaggttggtttattttgggacggagagagta 95
|||||||||| |||||||||||| |||| |||||
Sbjct: 38 tacgaggttgatttattttgggatggagggagta 5
>RF00906;MIR1122;AAAA02000966.1/612-453 39946:Oryza sativa Indica
Group
Length = 160
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 5 tctactccctccgtcccaaaataagtcaa 33
|||||||||||||||||||||||| ||||
Sbjct: 158 tctactccctccgtcccaaaataactcaa 130
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AL606686.3/85873-85713 39947:Oryza sativa Japonica
Group
Length = 161
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 3 tatctactccctccgtcccaaaata 27
|||||||||||||||||||||||||
Sbjct: 161 tatctactccctccgtcccaaaata 137
>RF00906;MIR1122;AAAA02035134.1/58354-58198 39946:Oryza sativa
Indica Group
Length = 157
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 3 tatctactccctccgtcccaaaata 27
|||||||||||||||||||||||||
Sbjct: 157 tatctactccctccgtcccaaaata 133
>RF00906;MIR1122;AL731784.3/7045-7181 4530:Oryza sativa (rice)
Length = 137
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 62 tacgaggttggtttattttgggacggagagagtagat 98
|||||||||||||||||| |||| |||| ||||||||
Sbjct: 100 tacgaggttggtttatttggggatggagggagtagat 136
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagtcaatcccgta 40
|||||||||| ||||||||||| |||||| ||||
Sbjct: 5 tactccctccatcccaaaataaatcaatctcgta 38
>RF00906;MIR1122;AAAA02000569.1/43583-43659 39946:Oryza sativa
Indica Group
Length = 77
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 tatctactccctccgtcccaaaata 27
|||||||||||||||||||||||||
Sbjct: 1 tatctactccctccgtcccaaaata 25
>RF00906;MIR1122;AP003866.3/59767-59922 39947:Oryza sativa Japonica
Group
Length = 156
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 3 tatctactccctccgtcccaaaata 27
|||||||||||||||||||||||||
Sbjct: 156 tatctactccctccgtcccaaaata 132
Score = 46.1 bits (23), Expect = 9e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 60 agtacgaggttggtttattttgggacggagagagtagat 98
||||| |||||| | ||||||||||||||| ||||||||
Sbjct: 117 agtacaaggttgctatattttgggacggagggagtagat 155
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 244 tactccctccgtcccaaaataagt 221
>RF01058;MIR806;AACV01004692.1/2655-2900 39947:Oryza sativa
Japonica Group
Length = 246
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagt 25
>RF01058;MIR806;AAAA02014927.1/5775-5532 39946:Oryza sativa Indica
Group
Length = 244
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagt 25
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagt 25
>RF01058;MIR806;AACV01020112.1/46634-46870 39947:Oryza sativa
Japonica Group
Length = 237
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcccaaaataag 29
||||||||||||||||||||||||
Sbjct: 1 ctactccctccgtcccaaaataag 24
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 236 tactccctccgtcccaaaataa 215
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagt 217
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa
Indica Group
Length = 243
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagt 25
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa
Japonica Group
Length = 245
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagt 25
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagt 217
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagt 217
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagt 28
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagt 78
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum
(bread wheat)
Length = 104
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagt 28
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 100 tactccctccgtcccaaaataagt 77
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagt 28
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagt 28
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 112 tactccctccgtcccaaaataagt 89
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 111 tactccctccgtcccaaaataagt 88
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 100 tactccctccgtcccaaaataagt 77
>RF00906;MIR1122;AF181455.1/3108-2994 4513:Hordeum vulgare
Length = 115
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 111 tactccctccgtcccaaaataagt 88
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 5 tctactccctccgtcccaaaataa 28
||||||||||||||||||||||||
Sbjct: 103 tctactccctccgtcccaaaataa 80
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagt 28
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagt 78
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagt 28
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaataa 28
|||||||||||||||||||||||
Sbjct: 102 ctactccctccgtcccaaaataa 80
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagt 28
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaataa 28
|||||||||||||||||||||||
Sbjct: 102 ctactccctccgtcccaaaataa 80
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagt 28
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagt 78
>RF00906;MIR1122;AAAA02022195.1/27114-27226 39946:Oryza sativa
Indica Group
Length = 113
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 68 gttggtttattttgggacggagagagta 95
|||||||||||||||||||||| |||||
Sbjct: 82 gttggtttattttgggacggagggagta 109
Score = 46.1 bits (23), Expect = 9e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagtcaatcccgtac 41
||||||||||||| |||||||| |||||| |||||
Sbjct: 5 tactccctccgtctcaaaataaatcaatctcgtac 39
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 109 tactccctccgtcccaaaataa 88
>RF00906;MIR1122;AAAA02027402.1/5650-5805 39946:Oryza sativa
Indica Group
Length = 156
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 atctactccctccgtcccaaaata 27
||||||||||||||||||||||||
Sbjct: 2 atctactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
Japonica Group
Length = 92
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagt 30
||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagt 28
>RF00906;MIR1122;AP008209.1/8919908-8919797 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 4 atctactccctccgtcccaaaata 27
||||||||||||||||||||||||
Sbjct: 111 atctactccctccgtcccaaaata 88
>RF00906;MIR1122;AP006453.3/76317-76162 39947:Oryza sativa
Japonica Group
Length = 156
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 atctactccctccgtcccaaaata 27
||||||||||||||||||||||||
Sbjct: 2 atctactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008216.1/22670503-22670626 39947:Oryza sativa
Japonica Group
Length = 124
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 4 atctactccctccgtcccaaaata 27
||||||||||||||||||||||||
Sbjct: 123 atctactccctccgtcccaaaata 100
>RF00906;MIR1122;AAAA02014858.1/50124-50003 39946:Oryza sativa
Indica Group
Length = 122
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 tatctactccctccgtcccaaaataagt 30
||||||||||||||||||||| ||||||
Sbjct: 1 tatctactccctccgtcccaatataagt 28
>RF00906;MIR1122;AP005399.3/486-590 39947:Oryza sativa Japonica
Group
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 3 tatctactccctccgtcccaaaat 26
||||||||||||||||||||||||
Sbjct: 105 tatctactccctccgtcccaaaat 82
>RF00906;MIR1122;AL662959.3/95147-95258 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 atctactccctccgtcccaaaata 27
||||||||||||||||||||||||
Sbjct: 2 atctactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01024204.1/3332-3459 39947:Oryza sativa
Japonica Group
Length = 128
Score = 48.1 bits (24), Expect = 2e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 5 tctactccctccgtcccaaaataagtcaatcccgtactag 44
||||||||||||||||||||| ||||||| | ||||||||
Sbjct: 126 tctactccctccgtcccaaaa-aagtcaacctcgtactag 88
>RF00906;MIR1122;AACV01025228.1/13353-13452 39947:Oryza sativa
Japonica Group
Length = 100
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 atctactccctccgtcccaaaata 27
||||||||||||||||||||||||
Sbjct: 2 atctactccctccgtcccaaaata 25
>RF00906;MIR1122;AC078829.10/4988-5143 39947:Oryza sativa Japonica
Group
Length = 156
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 4 atctactccctccgtcccaaaata 27
||||||||||||||||||||||||
Sbjct: 155 atctactccctccgtcccaaaata 132
>RF00906;MIR1122;AP005676.3/140751-140855 39947:Oryza sativa
Japonica Group
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 3 tatctactccctccgtcccaaaat 26
||||||||||||||||||||||||
Sbjct: 105 tatctactccctccgtcccaaaat 82
>RF00906;MIR1122;AAAA02015438.1/12525-12421 39946:Oryza sativa
Indica Group
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 atctactccctccgtcccaaaata 27
||||||||||||||||||||||||
Sbjct: 2 atctactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01001495.1/5727-5857 39947:Oryza sativa
Japonica Group
Length = 131
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 60 agtacgaggttggtttattttgggacggagagagta 95
||||| |||||||||| || ||||||||||||||||
Sbjct: 92 agtactaggttggttttttgtgggacggagagagta 127
>RF00906;MIR1122;AP003508.3/31246-31125 39947:Oryza sativa
Japonica Group
Length = 122
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 61 gtacgaggttggtttattttgggacggagagagtag 96
||||| |||||||||||||| |||||||| ||||||
Sbjct: 39 gtacggggttggtttattttaggacggagggagtag 4
>RF01058;MIR806;AP008208.1/24144061-24144300 39947:Oryza sativa
Japonica Group
Length = 240
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataag 29
|||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataag 24
>RF01058;MIR806;AACV01004890.1/11000-11239 39947:Oryza sativa
Japonica Group
Length = 240
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataag 29
|||||||||||||||||||||||
Sbjct: 239 tactccctccgtcccaaaataag 217
>RF00906;MIR1122;ABXC01006480.1/93142-93031 4558:Sorghum bicolor
(sorghum)
Length = 112
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagtcaa 33
|||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtcccaaaataaatcaa 31
>RF00906;MIR1122;AF525764.1/1593-1489 200361:Aegilops tauschii
subsp. strangulata
Length = 105
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 4 atctactccctccgtcccaaaataagt 30
||||||||||||| |||||||||||||
Sbjct: 104 atctactccctccatcccaaaataagt 78
>RF00906;MIR1122;FJ581044.1/175385-175266 4538:Oryza glaberrima
(African rice)
Length = 120
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagtcaa 33
|||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtcccaaaataactcaa 31
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataagtcaa 33
||||||||||||| |||||||||||||
Sbjct: 116 tactccctccgtctcaaaataagtcaa 90
>RF00906;MIR1122;AAAA02034474.1/8259-8349 39946:Oryza sativa
Indica Group
Length = 91
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 5 tctactccctccgtcccaaaata 27
|||||||||||||||||||||||
Sbjct: 89 tctactccctccgtcccaaaata 67
>RF00906;MIR1122;AC104429.2/50540-50620 39947:Oryza sativa
Japonica Group
Length = 81
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 66 aggttggtttattttgggacggagagagtag 96
|||||||||| ||||||||||||| ||||||
Sbjct: 48 aggttggttttttttgggacggagggagtag 78
>RF00906;MIR1122;AAAA02007985.1/61647-61567 39946:Oryza sativa
Indica Group
Length = 81
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 66 aggttggtttattttgggacggagagagtag 96
|||||||||| ||||||||||||| ||||||
Sbjct: 34 aggttggttttttttgggacggagggagtag 4
>RF00906;MIR1122;AACV01007649.1/5705-5795 39947:Oryza sativa
Japonica Group
Length = 91
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 5 tctactccctccgtcccaaaataagtc 31
||||||||||||||||||||| |||||
Sbjct: 3 tctactccctccgtcccaaaaaaagtc 29
>RF00906;MIR1122;AP008213.1/3607812-3607697 39947:Oryza sativa
Japonica Group
Length = 116
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 5 tctactccctccgtcccaaaata 27
|||||||||||||||||||||||
Sbjct: 114 tctactccctccgtcccaaaata 92
>RF00906;MIR1122;AAAA02028032.1/2328-2217 39946:Oryza sativa Indica
Group
Length = 112
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 5 tctactccctccgtcccaaaata 27
|||||||||||||||||||||||
Sbjct: 110 tctactccctccgtcccaaaata 88
>RF00906;MIR1122;CT827956.1/52813-52688 4530:Oryza sativa (rice)
Length = 126
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 5 tctactccctccgtcccaaaata 27
|||||||||||||||||||||||
Sbjct: 124 tctactccctccgtcccaaaata 102
>RF00906;MIR1122;AAAA02034107.1/9075-8937 39946:Oryza sativa Indica
Group
Length = 139
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 5 tctactccctccgtcccaaaata 27
|||||||||||||||||||||||
Sbjct: 137 tctactccctccgtcccaaaata 115
>RF00906;MIR1122;AAAA02006222.1/38105-37993 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagtcaa 33
|||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtcccaaaataaatcaa 31
>RF00906;MIR1122;AAAA02006241.1/8357-8245 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataagtcaa 33
|||||| ||||||||||||||||||||
Sbjct: 5 tactccatccgtcccaaaataagtcaa 31
>RF01058;MIR806;AAAA02020164.1/6230-6473 39946:Oryza sativa Indica
Group
Length = 244
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 244 ctactccctccgtcccaaaata 223
>RF01058;MIR806;AP003491.3/18972-19202 39947:Oryza sativa Japonica
Group
Length = 231
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 1 ctactccctccgtcccaaaata 22
>RF01058;MIR806;AP003911.3/91791-91550 39947:Oryza sativa Japonica
Group
Length = 242
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 242 ctactccctccgtcccaaaata 221
>RF00906;MIR1122;AF325196.1/34233-34141 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 90 ctactccctccgtcccaaaata 69
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 ctccctccgtcccaaaataagt 30
||||||||||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagt 28
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 ctccctccgtcccaaaataagt 30
||||||||||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagt 28
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 149 tactccctccgtcccaaaataa 128
>RF00906;MIR1122;EF560592.1/17009-17118 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 110
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 tctactccctccgtcccaaaataagt 30
|||||| |||||||||||||||||||
Sbjct: 108 tctactacctccgtcccaaaataagt 83
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataa 80
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 115 tactccctccgtcccaaaataa 94
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataa 80
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataa 80
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataa 80
>RF00906;MIR1122;AAAA02021752.1/2915-2764 39946:Oryza sativa Indica
Group
Length = 152
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 149 ctactccctccgtcccaaaata 128
>RF00906;MIR1122;AAAA02032192.1/8285-8403 39946:Oryza sativa Indica
Group
Length = 119
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 116 ctactccctccgtcccaaaata 95
>RF00906;MIR1122;AP008209.1/35984076-35984203 39947:Oryza sativa
Japonica Group
Length = 128
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 125 ctactccctccgtcccaaaata 104
>RF00906;MIR1122;AAAA02033663.1/22175-22286 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 tctactccctccgtcccaaaat 26
||||||||||||||||||||||
Sbjct: 3 tctactccctccgtcccaaaat 24
>RF00906;MIR1122;AAAA02028442.1/1248-1113 39946:Oryza sativa
Indica Group
Length = 136
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 66 aggttggtttattttgggacggagagagta 95
||||| |||||||||||||||||| |||||
Sbjct: 103 aggtttgtttattttgggacggagggagta 132
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 132 tactccctccgtcccaaaataa 111
>RF00906;MIR1122;AAAA02016488.1/7317-7428 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 109 ctactccctccgtcccaaaata 88
>RF00906;MIR1122;AACV01002075.1/518-362 39947:Oryza sativa Japonica
Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 154 ctactccctccgtcccaaaata 133
>RF00906;MIR1122;AAAA02003301.1/35949-35819 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 128 ctactccctccgtcccaaaata 107
>RF00906;MIR1122;AAAA02032340.1/20991-20868 39946:Oryza sativa
Indica Group
Length = 124
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 121 ctactccctccgtcccaaaata 100
>RF00906;MIR1122;AAAA02033927.1/2539-2391 39946:Oryza sativa
Indica Group
Length = 149
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02013497.1/8427-8281 39946:Oryza sativa
Indica Group
Length = 147
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02003606.1/3920-3764 39946:Oryza sativa Indica
Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 154 ctactccctccgtcccaaaata 133
>RF00906;MIR1122;AP008218.1/2340117-2339983 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 132 ctactccctccgtcccaaaata 111
>RF00906;MIR1122;AP002744.2/5581-5711 39947:Oryza sativa Japonica
Group
Length = 131
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 128 ctactccctccgtcccaaaata 107
>RF00906;MIR1122;AAAA02004166.1/9974-9858 39946:Oryza sativa
Indica Group
Length = 117
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AP004994.2/69469-69314 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 153 ctactccctccgtcccaaaata 132
>RF00906;MIR1122;AP008213.1/28683389-28683301 39947:Oryza sativa
Japonica Group
Length = 89
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 tctactccctccgtcccaaaataagt 30
|||||||||||||| |||||||||||
Sbjct: 87 tctactccctccgttccaaaataagt 62
>RF00906;MIR1122;AAAA02007218.1/59330-59175 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 66 aggttggtttattttgggacggagagagta 95
|||||| | |||||||||||||||||||||
Sbjct: 34 aggttgctatattttgggacggagagagta 5
>RF00906;MIR1122;AC130724.2/11285-11174 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008208.1/9514407-9514515 39947:Oryza sativa
Japonica Group
Length = 109
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008216.1/11618978-11618822 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 154 ctactccctccgtcccaaaata 133
>RF00906;MIR1122;AP003410.4/123214-123103 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 109 ctactccctccgtcccaaaata 88
>RF00906;MIR1122;AP008207.1/42089526-42089634 39947:Oryza sativa
Japonica Group
Length = 109
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01020861.1/25006-25108 39947:Oryza sativa
Japonica Group
Length = 103
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 66 aggttggtttattttgggacggagagagta 95
||||| |||||||||||||||||| |||||
Sbjct: 70 aggtttgtttattttgggacggagggagta 99
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 99 tactccctccgtcccaaaataa 78
>RF00906;MIR1122;AACV01009606.1/13757-13637 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AAAA02009296.1/3612-3735 39946:Oryza sativa Indica
Group
Length = 124
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 121 ctactccctccgtcccaaaata 100
>RF00906;MIR1122;AL845342.2/23218-23105 4530:Oryza sativa (rice)
Length = 114
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 111 ctactccctccgtcccaaaata 90
>RF00906;MIR1122;AP008217.1/18229594-18229693 39947:Oryza sativa
Japonica Group
Length = 100
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 97 ctactccctccgtcccaaaata 76
>RF00906;MIR1122;AC145396.3/122873-122984 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 109 ctactccctccgtcccaaaata 88
>RF00906;MIR1122;AP008216.1/16113535-16113433 39947:Oryza sativa
Japonica Group
Length = 103
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 tctactccctccgtcccaaaat 26
||||||||||||||||||||||
Sbjct: 3 tctactccctccgtcccaaaat 24
>RF00906;MIR1122;AAAA02005682.1/11197-11089 39946:Oryza sativa
Indica Group
Length = 109
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 106 ctactccctccgtcccaaaata 85
>RF00906;MIR1122;AC135427.3/71840-71709 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 75 tattttgggacggagagagtag 96
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagagagtag 4
>RF00906;MIR1122;AC229754.2/94242-94126 63629:Oryza minuta
Length = 117
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 66 aggttggtttattttgggacggagagagta 95
||||| |||||||||||||||||| |||||
Sbjct: 84 aggtttgtttattttgggacggagggagta 113
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 113 tactccctccgtcccaaaataa 92
>RF00906;MIR1122;AL662977.3/22853-22707 39947:Oryza sativa Japonica
Group
Length = 147
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 144 ctactccctccgtcccaaaata 123
>RF00906;MIR1122;AAAA02018670.1/1486-1331 39946:Oryza sativa Indica
Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 153 ctactccctccgtcccaaaata 132
>RF00906;MIR1122;AC138197.3/31250-31161 39947:Oryza sativa
Japonica Group
Length = 90
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 87 ctactccctccgtcccaaaata 66
>RF00906;MIR1122;AC137593.2/94685-94531 39947:Oryza sativa Japonica
Group
Length = 155
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 152 ctactccctccgtcccaaaata 131
>RF00906;MIR1122;AL831796.5/20323-20408 4530:Oryza sativa (rice)
Length = 86
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01024802.1/12019-12139 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 118 ctactccctccgtcccaaaata 97
>RF00906;MIR1122;AACV01012472.1/10900-10769 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 129 ctactccctccgtcccaaaata 108
>RF00906;MIR1122;BX000499.1/44774-44875 4530:Oryza sativa (rice)
Length = 102
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 66 aggttggtttattttgggacggagagagta 95
|||||| | |||||||||||||||||||||
Sbjct: 34 aggttgctatattttgggacggagagagta 5
>RF00906;MIR1122;AK242602.1/3859-3737 39947:Oryza sativa Japonica
Group
Length = 123
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 120 ctactccctccgtcccaaaata 99
>RF00906;MIR1122;AAAA02019483.1/16379-16491 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 109 tactccctccgtcccaaaataa 88
>RF00906;MIR1122;AAAA02018626.1/12551-12423 39946:Oryza sativa
Indica Group
Length = 129
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 66 aggttggtttattttgggacggagagagta 95
|||||| ||||||||||||||||| |||||
Sbjct: 96 aggttgttttattttgggacggagggagta 125
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 125 tactccctccgtcccaaaataa 104
>RF00906;MIR1122;AAAA02005722.1/24068-24224 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 154 ctactccctccgtcccaaaata 133
>RF00906;MIR1122;AACV01001520.1/25871-25960 39947:Oryza sativa
Japonica Group
Length = 90
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AACV01019101.1/4942-4817 39947:Oryza sativa
Japonica Group
Length = 126
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 74 ttattttgggacggagagagta 95
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagagagta 5
>RF00906;MIR1122;AL731597.3/103356-103467 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 109 ctactccctccgtcccaaaata 88
>RF00906;MIR1122;AACV01023162.1/1695-1577 39947:Oryza sativa
Japonica Group
Length = 119
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 116 ctactccctccgtcccaaaata 95
>RF00906;MIR1122;AC121366.4/55476-55582 39947:Oryza sativa Japonica
Group
Length = 107
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 ctactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 104 ctactccctccgtcccaaaata 83
