miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP008216.1/15579713-15579809 39947:Oryza sativa
Japonica Group
Length = 97
Score = 192 bits (97), Expect = 6e-49
Identities = 97/97 (100%)
Strand = Plus / Minus
Query: 3 catctactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatactagt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 catctactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatactagt 38
Query: 63 acgggattgacttattttgggacggagggagtagata 99
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 acgggattgacttattttgggacggagggagtagata 1
Score = 54.0 bits (27), Expect = 4e-07
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 4 atctactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatactagta 63
|||||||| |||||||||||||||| ||| | |||||||| | || || | ||||||
Sbjct: 2 atctactccctccgtcccaaaataagtcaatcccgtactagtatatgacacttcctagta 61
Query: 64 cgggattgacttattttgggacggagggagtagat 98
|| | ||| |||||||||||||||| ||||||||
Sbjct: 62 cgaggttggtttattttgggacggagagagtagat 96
>RF00906;MIR1122;AP003303.4/77673-77577 39947:Oryza sativa
Japonica Group
Length = 97
Score = 113 bits (57), Expect = 4e-25
Identities = 81/89 (91%)
Strand = Plus / Plus
Query: 7 tactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatactagtacgg 66
||||| |||||||||||||||| ||||||||||||||||| |||||| ||||||||||
Sbjct: 5 tactccctccgtcccaaaataagccaacctcgtactaggatgtgtcacgtactagtacga 64
Query: 67 gattgacttattttgggacggagggagta 95
| ||| |||||||||||||||||||||||
Sbjct: 65 ggttggcttattttgggacggagggagta 93
Score = 97.6 bits (49), Expect = 3e-20
Identities = 79/89 (88%)
Strand = Plus / Minus
Query: 7 tactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatactagtacgg 66
||||| |||||||||||||||| ||||||||||||||| | ||| || || ||||||||
Sbjct: 93 tactccctccgtcccaaaataagccaacctcgtactagtacgtgacacatcctagtacga 34
Query: 67 gattgacttattttgggacggagggagta 95
| ||| |||||||||||||||||||||||
Sbjct: 33 ggttggcttattttgggacggagggagta 5
>RF00906;MIR1122;AP008212.1/6831401-6831305 39947:Oryza sativa
Japonica Group
Length = 97
Score = 75.8 bits (38), Expect = 1e-13
Identities = 77/90 (85%)
Strand = Plus / Minus
Query: 7 tactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatactagtacgg 66
||||| ||||||||||||||||| |||||||||| |||| |||||| || ||| ||||
Sbjct: 93 tactccctccgtcccaaaataaattaacctcgtacaaggatgtgtcacatcctaatacga 34
Query: 67 gattgacttattttgggacggagggagtag 96
|||| ||||||||| ||| ||||||||||
Sbjct: 33 gattagcttattttgagaccgagggagtag 4
Score = 52.0 bits (26), Expect = 1e-06
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 6 ctactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatactagtacg 65
|||||| ||| ||| |||||||| | || |||||| ||||| ||| || || || |||||
Sbjct: 4 ctactccctcggtctcaaaataagctaatctcgtattaggatgtgacacatccttgtacg 63
Query: 66 ggattgacttattttgggacggagggagta 95
| || | ||||||||||||||||||||||
Sbjct: 64 aggttaatttattttgggacggagggagta 93
>RF00906;MIR1122;AACV01001981.1/7100-7193 39947:Oryza sativa
Japonica Group
Length = 94
Score = 71.9 bits (36), Expect = 1e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 7 tactctctccgtcccaaaataaaccaacctcgtactagga 46
||||| ||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataaaccaacctcgtactagga 44
Score = 54.0 bits (27), Expect = 4e-07
Identities = 74/89 (83%), Gaps = 3/89 (3%)
Strand = Plus / Minus
Query: 7 tactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatactagtacgg 66
||||| ||||||||| |||||| | ||||||||| ||| ||||| || ||||||||
Sbjct: 90 tactccctccgtcccgaaataaccaaacctcgta---ggacatgtcacatcctagtacga 34
Query: 67 gattgacttattttgggacggagggagta 95
| ||| ||||||||||||||||||||||
Sbjct: 33 ggttggtttattttgggacggagggagta 5
>RF00906;MIR1122;AAAA02019539.1/50507-50413 39946:Oryza sativa
Indica Group
Length = 95
Score = 65.9 bits (33), Expect = 9e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 13 ctccgtcccaaaataaaccaacctcgtactaggaagtgtca 53
|||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 11 ctccgtcccaaaataaaccaacctggtactaggatgtgtca 51
>RF00906;MIR1122;AAAA02026943.1/18413-18317 39946:Oryza sativa
Indica Group
Length = 97
Score = 60.0 bits (30), Expect = 6e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 7 tactctctccgtcccaaaataaaccaacctcgtactag 44
||||| ||||||| ||||||||||||||||||||||||
Sbjct: 93 tactccctccgtctcaaaataaaccaacctcgtactag 56
Score = 50.1 bits (25), Expect = 5e-06
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 7 tactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatactagtacgg 66
||||| |||| ||| ||||||| ||||||||||| || || | || |||||||||||
Sbjct: 5 tactccctccatcctaaaataagccaacctcgtattacgatggaacacatactagtacga 64
Query: 67 gattgacttattttgggacggagggagta 95
| ||| |||||||| |||||||||||||
Sbjct: 65 ggttggtttattttgagacggagggagta 93
>RF00906;MIR1122;AACV01013045.1/9312-9408 39947:Oryza sativa
Japonica Group
Length = 97
Score = 58.0 bits (29), Expect = 2e-08
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 7 tactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatactagtacgg 66
||||| ||| ||||||||| || |||||| ||||||||| |||||| | |||||||
Sbjct: 5 tactccctctgtcccaaaaaaaggcaacctagtactaggatgtgtcacgtcgtagtacga 64
Query: 67 gattgacttattttgggacggagggagta 95
| |||| || |||||||||||||||||||
Sbjct: 65 ggttgagtttttttgggacggagggagta 93
Score = 58.0 bits (29), Expect = 2e-08
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 7 tactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatactagtacgg 66
||||| ||||||||||||| || ||||||||||||| || ||| || || |||||||
Sbjct: 93 tactccctccgtcccaaaaaaactcaacctcgtactacgacgtgacacatcctagtacta 34
Query: 67 gattgacttattttgggacggagggagta 95
| ||| ||| ||||||||| |||||||||
Sbjct: 33 ggttgcctttttttgggacagagggagta 5
>RF00906;MIR1122;AAAA02018379.1/19319-19440 39946:Oryza sativa
Indica Group
Length = 122
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 7 tactctctccgtcccaaaataaaccaacctcgtac 41
||||| ||||||||||||||||||||| |||||||
Sbjct: 118 tactccctccgtcccaaaataaaccaatctcgtac 84
Score = 46.1 bits (23), Expect = 9e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 61 gtacgggattgacttattttgggacggagggagta 95
||||| ||||| ||||||||||||||||||||||
Sbjct: 84 gtacgagattggtttattttgggacggagggagta 118
>RF00906;MIR1122;AAAA02022585.1/6052-5955 39946:Oryza sativa
Indica Group
Length = 98
Score = 52.0 bits (26), Expect = 1e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 38 gtactaggaagtgtcatatactagtacgggattgacttattttgggacggagggagta 95
||||||||| |||||| || ||||||| | |||| || |||||||||||||||||||
Sbjct: 37 gtactaggatgtgtcacatcgtagtacgaggttgagtttttttgggacggagggagta 94
Score = 44.1 bits (22), Expect = 3e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 7 tactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatactagtac 64
||||| ||||||||||||| || ||||||||||||| || ||| || || |||||||
Sbjct: 94 tactccctccgtcccaaaaaaactcaacctcgtactacgatgtgacacatcctagtac 37
>RF00906;MIR1122;AAAA02007860.1/10023-9886 39946:Oryza sativa Indica
Group
Length = 138
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 13 ctccgtcccaaaataaaccaacctcgtact 42
||||||||||||||||||||| ||||||||
Sbjct: 128 ctccgtcccaaaataaaccaatctcgtact 99
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa
Japonica Group
Length = 247
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagtag 96
|||||||||||||||||||||||||
Sbjct: 25 acttattttgggacggagggagtag 1
>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
Group
Length = 244
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagtag 96
|||||||||||||||||||||||||
Sbjct: 25 acttattttgggacggagggagtag 1
>RF01058;MIR806;AAAA02015465.1/824-1069 39946:Oryza sativa Indica
Group
Length = 246
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 72 acttattttgggacggagggagtag 96
|||||||||||||||||||||||||
Sbjct: 222 acttattttgggacggagggagtag 246
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 72 acttattttgggacggagggagtag 96
|||||||||||||||||||||||||
Sbjct: 217 acttattttgggacggagggagtag 241
>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
Group
Length = 245
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagtag 96
|||||||||||||||||||||||||
Sbjct: 25 acttattttgggacggagggagtag 1
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa
Indica Group
Length = 245
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagtag 96
|||||||||||||||||||||||||
Sbjct: 25 acttattttgggacggagggagtag 1
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagtag 96
|||||||||||||||||||||||||
Sbjct: 28 acttattttgggacggagggagtag 4
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagtag 96
|||||||||||||||||||||||||
Sbjct: 28 acttattttgggacggagggagtag 4
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 79 acttattttgggacggagggagta 102
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagtag 96
|||||||||||||||||||||||||
Sbjct: 28 acttattttgggacggagggagtag 4
>RF00906;MIR1122;AAAA02035057.1/21564-21428 39946:Oryza sativa
Indica Group
Length = 137
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 4 atctactctctccgtcccaaaataaaccaacctcgta 40
|||||||| |||| |||| ||||||||||||||||||
Sbjct: 136 atctactccctccatccccaaataaaccaacctcgta 100
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 7 tactctctccgtcccaaaataaaccaacctcgta 40
||||| |||| |||||||||||| ||||||||||
Sbjct: 5 tactccctccatcccaaaataaatcaacctcgta 38
>RF00906;MIR1122;AAAA02000966.1/612-453 39946:Oryza sativa Indica
Group
Length = 160
Score = 50.1 bits (25), Expect = 5e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 69 ttgacttattttgggacggagggagtaga 97
|||| ||||||||||||||||||||||||
Sbjct: 130 ttgagttattttgggacggagggagtaga 158
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AL606686.3/85873-85713 39947:Oryza sativa Japonica
Group
Length = 161
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtagata 99
|||||||||||||||||||||||||
Sbjct: 137 tattttgggacggagggagtagata 161
>RF00906;MIR1122;AAAA02035134.1/58354-58198 39946:Oryza sativa
Indica Group
Length = 157
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtagata 99
|||||||||||||||||||||||||
Sbjct: 133 tattttgggacggagggagtagata 157
>RF00906;MIR1122;AL731784.3/7045-7181 4530:Oryza sativa (rice)
Length = 137
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 4 atctactctctccgtcccaaaataaaccaacctcgta 40
|||||||| |||| |||| ||||||||||||||||||
Sbjct: 136 atctactccctccatccccaaataaaccaacctcgta 100
Score = 44.1 bits (22), Expect = 3e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 62 tacgggattgacttattttgggacggagggagta 95
|||| |||||| ||||||||||| ||||||||||
Sbjct: 38 tacgagattgatttattttgggatggagggagta 5
>RF00906;MIR1122;AAAA02000569.1/43583-43659 39946:Oryza sativa
Indica Group
Length = 77
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 75 tattttgggacggagggagtagata 99
|||||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtagata 1
>RF00906;MIR1122;AP003866.3/59767-59922 39947:Oryza sativa Japonica
Group
Length = 156
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtagata 99
|||||||||||||||||||||||||
Sbjct: 132 tattttgggacggagggagtagata 156
Score = 46.1 bits (23), Expect = 9e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 4 atctactctctccgtcccaaaataaaccaacctcgtact 42
|||||||| ||||||||||||||| | |||||| |||||
Sbjct: 155 atctactccctccgtcccaaaatatagcaaccttgtact 117
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 221 acttattttgggacggagggagta 244
>RF01058;MIR806;AACV01004692.1/2655-2900 39947:Oryza sativa
Japonica Group
Length = 246
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 25 acttattttgggacggagggagta 2
>RF01058;MIR806;AAAA02014927.1/5775-5532 39946:Oryza sativa Indica
Group
Length = 244
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 25 acttattttgggacggagggagta 2
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 25 acttattttgggacggagggagta 2
>RF01058;MIR806;AACV01020112.1/46634-46870 39947:Oryza sativa
Japonica Group
Length = 237
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 73 cttattttgggacggagggagtag 96
||||||||||||||||||||||||
Sbjct: 24 cttattttgggacggagggagtag 1
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 215 ttattttgggacggagggagta 236
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 217 acttattttgggacggagggagta 240
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa
Indica Group
Length = 243
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 25 acttattttgggacggagggagta 2
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa
Japonica Group
Length = 245
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 25 acttattttgggacggagggagta 2
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 217 acttattttgggacggagggagta 240
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 217 acttattttgggacggagggagta 240
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 28 acttattttgggacggagggagta 5
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 78 acttattttgggacggagggagta 101
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum
(bread wheat)
Length = 104
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 28 acttattttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 77 acttattttgggacggagggagta 100
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 28 acttattttgggacggagggagta 5
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 28 acttattttgggacggagggagta 5
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 89 acttattttgggacggagggagta 112
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 88 acttattttgggacggagggagta 111
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 77 acttattttgggacggagggagta 100
>RF00906;MIR1122;AF181455.1/3108-2994 4513:Hordeum vulgare
Length = 115
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 88 acttattttgggacggagggagta 111
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 ttattttgggacggagggagtaga 97
||||||||||||||||||||||||
Sbjct: 80 ttattttgggacggagggagtaga 103
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 28 acttattttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 78 acttattttgggacggagggagta 101
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 28 acttattttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 74 ttattttgggacggagggagtag 96
|||||||||||||||||||||||
Sbjct: 80 ttattttgggacggagggagtag 102
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 28 acttattttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 74 ttattttgggacggagggagtag 96
|||||||||||||||||||||||
Sbjct: 80 ttattttgggacggagggagtag 102
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 28 acttattttgggacggagggagta 5
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 78 acttattttgggacggagggagta 101
>RF00906;MIR1122;AAAA02022195.1/27114-27226 39946:Oryza sativa
Indica Group
Length = 113
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 7 tactctctccgtcccaaaataaaccaac 34
||||| ||||||||||||||||||||||
Sbjct: 109 tactccctccgtcccaaaataaaccaac 82
Score = 46.1 bits (23), Expect = 9e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 61 gtacgggattgacttattttgggacggagggagta 95
||||| |||||| |||||||| |||||||||||||
Sbjct: 39 gtacgagattgatttattttgagacggagggagta 5
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 88 ttattttgggacggagggagta 109
>RF00906;MIR1122;AAAA02027402.1/5650-5805 39946:Oryza sativa
Indica Group
Length = 156
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 75 tattttgggacggagggagtagat 98
||||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtagat 2
>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
Japonica Group
Length = 92
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 28 acttattttgggacggagggagta 5
>RF00906;MIR1122;AP008209.1/8919908-8919797 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtagat 98
||||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtagat 111
>RF00906;MIR1122;AP006453.3/76317-76162 39947:Oryza sativa
Japonica Group
Length = 156
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 75 tattttgggacggagggagtagat 98
||||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtagat 2
>RF00906;MIR1122;AP008216.1/22670503-22670626 39947:Oryza sativa
Japonica Group
Length = 124
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtagat 98
||||||||||||||||||||||||
Sbjct: 100 tattttgggacggagggagtagat 123
>RF00906;MIR1122;AAAA02014858.1/50124-50003 39946:Oryza sativa
Indica Group
Length = 122
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagtagata 99
|||||| |||||||||||||||||||||
Sbjct: 28 acttatattgggacggagggagtagata 1
>RF00906;MIR1122;AP005399.3/486-590 39947:Oryza sativa Japonica
Group
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 attttgggacggagggagtagata 99
||||||||||||||||||||||||
Sbjct: 82 attttgggacggagggagtagata 105
>RF00906;MIR1122;AL662959.3/95147-95258 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 75 tattttgggacggagggagtagat 98
||||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtagat 2
>RF00906;MIR1122;AACV01024204.1/3332-3459 39947:Oryza sativa
Japonica Group
Length = 128
Score = 48.1 bits (24), Expect = 2e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 58 ctagtacgggattgacttattttgggacggagggagtaga 97
|||||||| | ||||||| |||||||||||||||||||||
Sbjct: 88 ctagtacgaggttgactt-ttttgggacggagggagtaga 126
>RF00906;MIR1122;AACV01025228.1/13353-13452 39947:Oryza sativa
Japonica Group
Length = 100
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 75 tattttgggacggagggagtagat 98
||||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtagat 2
>RF00906;MIR1122;AC078829.10/4988-5143 39947:Oryza sativa Japonica
Group
Length = 156
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtagat 98
||||||||||||||||||||||||
Sbjct: 132 tattttgggacggagggagtagat 155
>RF00906;MIR1122;AP005676.3/140751-140855 39947:Oryza sativa
Japonica Group
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 attttgggacggagggagtagata 99
||||||||||||||||||||||||
Sbjct: 82 attttgggacggagggagtagata 105
>RF00906;MIR1122;AAAA02015438.1/12525-12421 39946:Oryza sativa
Indica Group
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 75 tattttgggacggagggagtagat 98
||||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtagat 2
>RF00906;MIR1122;AACV01001495.1/5727-5857 39947:Oryza sativa
Japonica Group
Length = 131
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 7 tactctctccgtcccaaaataaaccaacctcgtact 42
|||||||||||||||| || |||||||||| |||||
Sbjct: 127 tactctctccgtcccacaaaaaaccaacctagtact 92
>RF00906;MIR1122;AP003508.3/31246-31125 39947:Oryza sativa
Japonica Group
Length = 122
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 6 ctactctctccgtcccaaaataaaccaacctcgtac 41
|||||| |||||||| |||||||||||||| |||||
Sbjct: 4 ctactccctccgtcctaaaataaaccaaccccgtac 39
>RF01058;MIR806;AP008208.1/24144061-24144300 39947:Oryza sativa
Japonica Group
Length = 240
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 73 cttattttgggacggagggagta 95
|||||||||||||||||||||||
Sbjct: 24 cttattttgggacggagggagta 2
>RF01058;MIR806;AACV01004890.1/11000-11239 39947:Oryza sativa
Japonica Group
Length = 240
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 cttattttgggacggagggagta 95
|||||||||||||||||||||||
Sbjct: 217 cttattttgggacggagggagta 239
>RF00906;MIR1122;ABXC01006480.1/93142-93031 4558:Sorghum bicolor
(sorghum)
Length = 112
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 69 ttgacttattttgggacggagggagta 95
|||| ||||||||||||||||||||||
Sbjct: 31 ttgatttattttgggacggagggagta 5
>RF00906;MIR1122;AF525764.1/1593-1489 200361:Aegilops tauschii
subsp. strangulata
Length = 105
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 72 acttattttgggacggagggagtagat 98
||||||||||||| |||||||||||||
Sbjct: 78 acttattttgggatggagggagtagat 104
>RF00906;MIR1122;FJ581044.1/175385-175266 4538:Oryza glaberrima
(African rice)
Length = 120
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 69 ttgacttattttgggacggagggagta 95
|||| ||||||||||||||||||||||
Sbjct: 31 ttgagttattttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 69 ttgacttattttgggacggagggagta 95
||||||||||||| |||||||||||||
Sbjct: 90 ttgacttattttgagacggagggagta 116
>RF00906;MIR1122;AAAA02034474.1/8259-8349 39946:Oryza sativa
Indica Group
Length = 91
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtaga 97
|||||||||||||||||||||||
Sbjct: 67 tattttgggacggagggagtaga 89
>RF00906;MIR1122;AC104429.2/50540-50620 39947:Oryza sativa
Japonica Group
Length = 81
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 6 ctactctctccgtcccaaaataaaccaacct 36
|||||| ||||||||||||| ||||||||||
Sbjct: 78 ctactccctccgtcccaaaaaaaaccaacct 48
>RF00906;MIR1122;AAAA02007985.1/61647-61567 39946:Oryza sativa
Indica Group
Length = 81
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 6 ctactctctccgtcccaaaataaaccaacct 36
|||||| ||||||||||||| ||||||||||
Sbjct: 4 ctactccctccgtcccaaaaaaaaccaacct 34
>RF00906;MIR1122;AACV01007649.1/5705-5795 39947:Oryza sativa
Japonica Group
Length = 91
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 71 gacttattttgggacggagggagtaga 97
||||| |||||||||||||||||||||
Sbjct: 29 gactttttttgggacggagggagtaga 3
>RF00906;MIR1122;AP008213.1/3607812-3607697 39947:Oryza sativa
Japonica Group
Length = 116
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtaga 97
|||||||||||||||||||||||
Sbjct: 92 tattttgggacggagggagtaga 114
>RF00906;MIR1122;AAAA02028032.1/2328-2217 39946:Oryza sativa Indica
Group
Length = 112
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtaga 97
|||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtaga 110
>RF00906;MIR1122;CT827956.1/52813-52688 4530:Oryza sativa (rice)
Length = 126
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtaga 97
|||||||||||||||||||||||
Sbjct: 102 tattttgggacggagggagtaga 124
>RF00906;MIR1122;AAAA02034107.1/9075-8937 39946:Oryza sativa Indica
Group
Length = 139
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtaga 97
|||||||||||||||||||||||
Sbjct: 115 tattttgggacggagggagtaga 137
>RF00906;MIR1122;AAAA02006222.1/38105-37993 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 69 ttgacttattttgggacggagggagta 95
|||| ||||||||||||||||||||||
Sbjct: 31 ttgatttattttgggacggagggagta 5
>RF00906;MIR1122;AAAA02006241.1/8357-8245 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 69 ttgacttattttgggacggagggagta 95
|||||||||||||||||||| ||||||
Sbjct: 31 ttgacttattttgggacggatggagta 5
>RF01058;MIR806;AAAA02020164.1/6230-6473 39946:Oryza sativa Indica
Group
Length = 244
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 223 tattttgggacggagggagtag 244
>RF01058;MIR806;AP003491.3/18972-19202 39947:Oryza sativa Japonica
Group
Length = 231
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 22 tattttgggacggagggagtag 1
>RF01058;MIR806;AP003911.3/91791-91550 39947:Oryza sativa Japonica
Group
Length = 242
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 221 tattttgggacggagggagtag 242
>RF00906;MIR1122;AF325196.1/34233-34141 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 69 tattttgggacggagggagtag 90
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggag 93
||||||||||||||||||||||
Sbjct: 28 acttattttgggacggagggag 7
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggag 93
||||||||||||||||||||||
Sbjct: 28 acttattttgggacggagggag 7
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 128 ttattttgggacggagggagta 149
>RF00906;MIR1122;EF560592.1/17009-17118 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 110
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 72 acttattttgggacggagggagtaga 97
||||||||||||||||||| ||||||
Sbjct: 83 acttattttgggacggaggtagtaga 108
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 80 ttattttgggacggagggagta 101
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 94 ttattttgggacggagggagta 115
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 80 ttattttgggacggagggagta 101
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 80 ttattttgggacggagggagta 101
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 80 ttattttgggacggagggagta 101
>RF00906;MIR1122;AAAA02021752.1/2915-2764 39946:Oryza sativa Indica
Group
Length = 152
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 128 tattttgggacggagggagtag 149
>RF00906;MIR1122;AAAA02032192.1/8285-8403 39946:Oryza sativa Indica
Group
Length = 119
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 95 tattttgggacggagggagtag 116
>RF00906;MIR1122;AP008209.1/35984076-35984203 39947:Oryza sativa
Japonica Group
Length = 128
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 104 tattttgggacggagggagtag 125
>RF00906;MIR1122;AAAA02033663.1/22175-22286 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 76 attttgggacggagggagtaga 97
||||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtaga 3
>RF00906;MIR1122;AAAA02028442.1/1248-1113 39946:Oryza sativa
Indica Group
Length = 136
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 7 tactctctccgtcccaaaataaaccaacct 36
||||| |||||||||||||||||| |||||
Sbjct: 132 tactccctccgtcccaaaataaacaaacct 103
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 111 ttattttgggacggagggagta 132
>RF00906;MIR1122;AAAA02016488.1/7317-7428 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtag 109
>RF00906;MIR1122;AACV01002075.1/518-362 39947:Oryza sativa Japonica
Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 133 tattttgggacggagggagtag 154
>RF00906;MIR1122;AAAA02003301.1/35949-35819 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 107 tattttgggacggagggagtag 128
>RF00906;MIR1122;AAAA02032340.1/20991-20868 39946:Oryza sativa
Indica Group
Length = 124
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 100 tattttgggacggagggagtag 121
>RF00906;MIR1122;AAAA02033927.1/2539-2391 39946:Oryza sativa
Indica Group
Length = 149
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtag 4
>RF00906;MIR1122;AAAA02013497.1/8427-8281 39946:Oryza sativa
Indica Group
Length = 147
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtag 4
>RF00906;MIR1122;AAAA02003606.1/3920-3764 39946:Oryza sativa Indica
Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 133 tattttgggacggagggagtag 154
>RF00906;MIR1122;AP008218.1/2340117-2339983 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 111 tattttgggacggagggagtag 132
>RF00906;MIR1122;AP002744.2/5581-5711 39947:Oryza sativa Japonica
Group
Length = 131
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 107 tattttgggacggagggagtag 128
>RF00906;MIR1122;AAAA02004166.1/9974-9858 39946:Oryza sativa
Indica Group
Length = 117
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtag 4
>RF00906;MIR1122;AP004994.2/69469-69314 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 132 tattttgggacggagggagtag 153
>RF00906;MIR1122;AP008213.1/28683389-28683301 39947:Oryza sativa
Japonica Group
Length = 89
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 72 acttattttgggacggagggagtaga 97
||||||||||| ||||||||||||||
Sbjct: 62 acttattttggaacggagggagtaga 87
>RF00906;MIR1122;AAAA02007218.1/59330-59175 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 7 tactctctccgtcccaaaataaaccaacct 36
||||||||||||||||||||| | ||||||
Sbjct: 5 tactctctccgtcccaaaatatagcaacct 34
>RF00906;MIR1122;AC130724.2/11285-11174 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtag 4
>RF00906;MIR1122;AP008208.1/9514407-9514515 39947:Oryza sativa
Japonica Group
Length = 109
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtag 4
>RF00906;MIR1122;AP008216.1/11618978-11618822 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 133 tattttgggacggagggagtag 154
>RF00906;MIR1122;AP003410.4/123214-123103 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtag 109
>RF00906;MIR1122;AP008207.1/42089526-42089634 39947:Oryza sativa
Japonica Group
Length = 109
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtag 4
>RF00906;MIR1122;AACV01020861.1/25006-25108 39947:Oryza sativa
Japonica Group
Length = 103
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 7 tactctctccgtcccaaaataaaccaacct 36
||||| |||||||||||||||||| |||||
Sbjct: 99 tactccctccgtcccaaaataaacaaacct 70
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 78 ttattttgggacggagggagta 99
>RF00906;MIR1122;AACV01009606.1/13757-13637 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AAAA02009296.1/3612-3735 39946:Oryza sativa Indica
Group
Length = 124
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 100 tattttgggacggagggagtag 121
>RF00906;MIR1122;AL845342.2/23218-23105 4530:Oryza sativa (rice)
Length = 114
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 90 tattttgggacggagggagtag 111
>RF00906;MIR1122;AP008217.1/18229594-18229693 39947:Oryza sativa
Japonica Group
Length = 100
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 76 tattttgggacggagggagtag 97
>RF00906;MIR1122;AC145396.3/122873-122984 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtag 109
>RF00906;MIR1122;AP008216.1/16113535-16113433 39947:Oryza sativa
Japonica Group
Length = 103
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 76 attttgggacggagggagtaga 97
||||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtaga 3
>RF00906;MIR1122;AAAA02005682.1/11197-11089 39946:Oryza sativa
Indica Group
Length = 109
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 85 tattttgggacggagggagtag 106
>RF00906;MIR1122;AC135427.3/71840-71709 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 ctactctctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 ctactctctccgtcccaaaata 25
>RF00906;MIR1122;AC229754.2/94242-94126 63629:Oryza minuta
Length = 117
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 7 tactctctccgtcccaaaataaaccaacct 36
||||| |||||||||||||||||| |||||
Sbjct: 113 tactccctccgtcccaaaataaacaaacct 84
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 92 ttattttgggacggagggagta 113
>RF00906;MIR1122;AL662977.3/22853-22707 39947:Oryza sativa Japonica
Group
Length = 147
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 123 tattttgggacggagggagtag 144
>RF00906;MIR1122;AAAA02018670.1/1486-1331 39946:Oryza sativa Indica
Group
Length = 156
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 132 tattttgggacggagggagtag 153
>RF00906;MIR1122;AC138197.3/31250-31161 39947:Oryza sativa
Japonica Group
Length = 90
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 66 tattttgggacggagggagtag 87
>RF00906;MIR1122;AC137593.2/94685-94531 39947:Oryza sativa Japonica
Group
Length = 155
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 131 tattttgggacggagggagtag 152
>RF00906;MIR1122;AL831796.5/20323-20408 4530:Oryza sativa (rice)
Length = 86
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtag 4
>RF00906;MIR1122;AACV01024802.1/12019-12139 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 97 tattttgggacggagggagtag 118
>RF00906;MIR1122;AACV01012472.1/10900-10769 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 108 tattttgggacggagggagtag 129
>RF00906;MIR1122;BX000499.1/44774-44875 4530:Oryza sativa (rice)
Length = 102
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 7 tactctctccgtcccaaaataaaccaacct 36
||||||||||||||||||||| | ||||||
Sbjct: 5 tactctctccgtcccaaaatatagcaacct 34
>RF00906;MIR1122;AK242602.1/3859-3737 39947:Oryza sativa Japonica
Group
Length = 123
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 99 tattttgggacggagggagtag 120
>RF00906;MIR1122;AAAA02019483.1/16379-16491 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 88 ttattttgggacggagggagta 109
>RF00906;MIR1122;AAAA02018626.1/12551-12423 39946:Oryza sativa
Indica Group
Length = 129
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 7 tactctctccgtcccaaaataaaccaacct 36
||||| ||||||||||||||||| ||||||
Sbjct: 125 tactccctccgtcccaaaataaaacaacct 96
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 104 ttattttgggacggagggagta 125
>RF00906;MIR1122;AAAA02005722.1/24068-24224 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 133 tattttgggacggagggagtag 154
>RF00906;MIR1122;AACV01001520.1/25871-25960 39947:Oryza sativa
Japonica Group
Length = 90
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AACV01019101.1/4942-4817 39947:Oryza sativa
Japonica Group
Length = 126
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactctctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 5 tactctctccgtcccaaaataa 26
>RF00906;MIR1122;AL731597.3/103356-103467 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtag 109
>RF00906;MIR1122;AACV01023162.1/1695-1577 39947:Oryza sativa
Japonica Group
Length = 119
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 95 tattttgggacggagggagtag 116
>RF00906;MIR1122;AC121366.4/55476-55582 39947:Oryza sativa Japonica
Group
Length = 107
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 83 tattttgggacggagggagtag 104
