miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>50520_osa-miRf11305-akr:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 5 ttttgcaggcggacctcttaa 25
|||||||||||||||||||||
Sbjct: 40 ttttgcaggcggacctcttaa 20
Score = 38.2 bits (19), Expect = 6e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 3 atttttgcaggcggacctcttaagtgg 29
||||| |||||| ||||||||||||||
Sbjct: 48 attttcgcaggcagacctcttaagtgg 74
>51283_osa-miRf12068-akr:pmrd
Length = 158
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 3 atttttgcaggcggacctcttaag 26
||||||||| ||||||||||||||
Sbjct: 67 atttttgcatgcggacctcttaag 44
>49300_osa-miRf10085-akr:pmrd
Length = 88
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 11 aggcggacctcttaagtgg 29
|||||||||||||||||||
Sbjct: 33 aggcggacctcttaagtgg 15
>49256_osa-miRf10041-akr:pmrd
Length = 87
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 11 aggcggacctcttaagtgg 29
|||||||||||||||||||
Sbjct: 33 aggcggacctcttaagtgg 15
Score = 38.2 bits (19), Expect = 6e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 3 atttttgcaggcggacctcttaagtgg 29
||||| ||| |||||||||||||||||
Sbjct: 48 attttcgcatgcggacctcttaagtgg 74
