miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>50148_osa-miRf10933-akr:pmrd
Length = 108
Score = 85.7 bits (43), Expect = 5e-18
Identities = 46/47 (97%)
Strand = Plus / Minus
Query: 1 agatgacccttatctgtgacgggcattaactatatcccgtcacagat 47
|||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 102 agatgacccttatctgtgacgggcattaactataccccgtcacagat 56
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 agttaatgcccgtcacagat 73
||||||||||||||||||||
Sbjct: 72 agttaatgcccgtcacagat 91
>50264_osa-miRf11049-akr:pmrd
Length = 136
Score = 79.8 bits (40), Expect = 3e-16
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 1 agatgacccttatctgtgacgggcattaactatatcccgtcacagata 48
||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 24 agatgacccttatctgtgacgggcattaactatggcccgtcacagata 71
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 54 agttaatgcccgtcacagatga 75
||||||||||||||||||||||
Sbjct: 129 agttaatgcccgtcacagatga 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 atctgtgacgggcattaactat 33
||||||||||||||||||||||
Sbjct: 110 atctgtgacgggcattaactat 131
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 54 agttaatgcccgtcacagat 73
||||||||||||||||||||
Sbjct: 54 agttaatgcccgtcacagat 35
>50202_osa-miRf10987-akr:pmrd
Length = 138
Score = 77.8 bits (39), Expect = 1e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 2 gatgacccttatctgtgacgggcattaactatatcccgtcaca 44
||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 gatgacccttatctgtgacgggcattaactatagcccgtcaca 43
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 52 taagttaatgcccgtcacagatgagtataatc 83
||||||||||||||||||||||||||||||||
Sbjct: 107 taagttaatgcccgtcacagatgagtataatc 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 52 taagttaatgcccgtcacagatgagt 77
||||||||||||||||||| ||||||
Sbjct: 66 taagttaatgcccgtcacaaatgagt 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 54 agttaatgcccgtcacagat 73
||||||||||||||||||||
Sbjct: 30 agttaatgcccgtcacagat 11
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 12 atctgtgacgggcattaact 31
||||||||||||||||||||
Sbjct: 128 atctgtgacgggcattaact 109
>50960_osa-miRf11745-akr:pmrd
Length = 128
Score = 75.8 bits (38), Expect = 4e-15
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 2 gatgacccttatctgtgacgggcattaactatatcccgtcacagat 47
||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 1 gatgacccttatctgtgacgggcattaactatagcctgtcacagat 46
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 52 taagttaatgcccgtcacagatgagtataatc 83
||||||||||||||||||||||||||||||||
Sbjct: 97 taagttaatgcccgtcacagatgagtataatc 128
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 54 agttaatgcccgtcacagat 73
||||||||||||||||||||
Sbjct: 30 agttaatgcccgtcacagat 11
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 12 atctgtgacgggcattaact 31
||||||||||||||||||||
Sbjct: 118 atctgtgacgggcattaact 99
>50448_osa-miRf11233-akr:pmrd
Length = 99
Score = 75.8 bits (38), Expect = 4e-15
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 2 gatgacccttatctgtgacgggcattaactatatcccgtcacagat 47
|||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 1 gatgacccttatctgtgacgggtattaactataacccgtcacagat 46
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 52 taagttaatgcccgtcacagatgagtataatc 83
||||||||||||||||||||||||||||||||
Sbjct: 68 taagttaatgcccgtcacagatgagtataatc 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 12 atctgtgacgggcattaact 31
||||||||||||||||||||
Sbjct: 89 atctgtgacgggcattaact 70
>49772_osa-miRf10557-akr:pmrd
Length = 66
Score = 75.8 bits (38), Expect = 4e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 46 atagcataagttaatgcccgtcacagatgagtataatc 83
||||||||||||||||||||||||||||||||||||||
Sbjct: 29 atagcataagttaatgcccgtcacagatgagtataatc 66
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 54 agttaatgcccgtcacagatgagt 77
||||||||||||||||||||||||
Sbjct: 28 agttaatgcccgtcacagatgagt 5
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 12 atctgtgacgggcattaact 31
||||||||||||||||||||
Sbjct: 56 atctgtgacgggcattaact 37
>51194_osa-miRf11979-akr:pmrd
Length = 161
Score = 69.9 bits (35), Expect = 3e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1 agatgacccttatctgtgacgggcattaactatatcccg 39
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 123 agatgacccttatctgtgacgggcattaactatagcccg 161
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 52 taagttaatgcccgtcacagatgagtataatc 83
||||||||||||||||||||||||||||||||
Sbjct: 48 taagttaatgcccgtcacagatgagtataatc 79
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 52 taagttaatgcccgtcacagatgagt 77
||||||||||||||||||||||||||
Sbjct: 7 taagttaatgcccgtcacagatgagt 32
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 12 atctgtgacgggcattaact 31
||||||||||||||||||||
Sbjct: 28 atctgtgacgggcattaact 9
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 12 atctgtgacgggcattaact 31
||||||||||||||||||||
Sbjct: 69 atctgtgacgggcattaact 50
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 54 agttaatgcccgtcacagat 73
||||||||||||||||||||
Sbjct: 153 agttaatgcccgtcacagat 134
>50939_osa-miRf11724-akr:pmrd
Length = 89
Score = 69.9 bits (35), Expect = 3e-13
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 1 agatgacccttatctgtgacgggcattaactatatcccgtcacagat 47
|||||||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 73 agatgacccttatctgtgacggacattaactatagcctgtcacagat 27
>50116_osa-miRf10901-akr:pmrd
Length = 66
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 54 agttaatgcccgtcacagatgagtataatc 83
||||||||||||||||||||||||||||||
Sbjct: 37 agttaatgcccgtcacagatgagtataatc 66
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 atctgtgacgggcattaactata 34
|||||||||||||||||||||||
Sbjct: 9 atctgtgacgggcattaactata 31
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 54 agttaatgcccgtcacagatga 75
||||||||||||||||||||||
Sbjct: 28 agttaatgcccgtcacagatga 7
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 atctgtgacgggcattaactat 33
||||||||||||||||||||||
Sbjct: 56 atctgtgacgggcattaactat 35
>51144_osa-miRf11929-akr:pmrd
Length = 65
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 47 tagcataagttaatgcccgtcacagatga 75
|||||||||||||||||||||||||||||
Sbjct: 35 tagcataagttaatgcccgtcacagatga 7
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 54 agttaatgcccgtcacagatgagtata 80
|||||||||||||||||||||||||||
Sbjct: 37 agttaatgcccgtcacagatgagtata 63
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 atctgtgacgggcattaact 31
||||||||||||||||||||
Sbjct: 9 atctgtgacgggcattaact 28
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 12 atctgtgacgggcattaact 31
||||||||||||||||||||
Sbjct: 56 atctgtgacgggcattaact 37
>50391_osa-miRf11176-akr:pmrd
Length = 97
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 52 taagttaatgcccgtcacagatgagtataatc 83
|||||||| |||||||||||||||||||||||
Sbjct: 66 taagttaacgcccgtcacagatgagtataatc 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 12 atctgtgacgggcattaactatatcccgtcacagat 47
|||||||||||||||||||||| ||| ||||||||
Sbjct: 9 atctgtgacgggcattaactatggcccatcacagat 44
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 54 agttaatgcccgtcacagatga 75
||||||||||||||||||||||
Sbjct: 28 agttaatgcccgtcacagatga 7
>50863_osa-miRf11648-akr:pmrd
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 12 atctgtgacgggcattaactatatcccgtcacagat 47
|||||||||||||||||| |||| | ||||||||||
Sbjct: 60 atctgtgacgggcattaattatagcacgtcacagat 25
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 gttaatgcccgtcacagatgagt 77
|||||||||||||||||||||||
Sbjct: 1 gttaatgcccgtcacagatgagt 23
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 ttaatgcccgtcacagatga 75
||||||||||||||||||||
Sbjct: 43 ttaatgcccgtcacagatga 62
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 12 atctgtgacgggcattaac 30
|||||||||||||||||||
Sbjct: 19 atctgtgacgggcattaac 1
>49489_osa-miRf10274-akr:pmrd
Length = 145
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 cgggcattaactatatcccgtcacagat 47
||||||||||||||| ||||||||||||
Sbjct: 63 cgggcattaactatagcccgtcacagat 90
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 52 taagttaatgcccgtcacagatgagtataatc 83
||||||| |||||||||||||||||||||||
Sbjct: 113 taagttatggcccgtcacagatgagtataatc 144
>49923_osa-miRf10708-akr:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1 agatgacccttatctgtgacgggcat 26
||||||||||||||| ||||||||||
Sbjct: 76 agatgacccttatctatgacgggcat 51
>50948_osa-miRf11733-akr:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agatgacccttatctgtgacgggc 24
|||||||||| |||||||||||||
Sbjct: 81 agatgaccctcatctgtgacgggc 104
>50356_osa-miRf11141-akr:pmrd
Length = 115
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 56 ttaatgcccgtcacagatga 75
||||||||||||||||||||
Sbjct: 46 ttaatgcccgtcacagatga 27
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agatgacccttatctgtgacgggc 24
|||||||||| |||||||||||||
Sbjct: 84 agatgaccctcatctgtgacgggc 107
>49990_osa-miRf10775-akr:pmrd
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 ttaatgcccgtcacagatga 75
||||||||||||||||||||
Sbjct: 58 ttaatgcccgtcacagatga 77
>49989_osa-miRf10774-akr:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 56 ttaatgcccgtcacagatga 75
||||||||||||||||||||
Sbjct: 37 ttaatgcccgtcacagatga 18
