miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>50861_osa-miRf11646-akr:pmrd
Length = 95
Score = 188 bits (95), Expect = 6e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 8 ggtaccaggcctgatacctatgggtaccaggtctgacacctaaccatgacacctaggtac 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtaccaggcctgatacctatgggtaccaggtctgacacctaaccatgacacctaggtac 60
Query: 68 caagcctgatacctataggtatcaggtctgatacc 102
|||||||||||||||||||||||||||||||||||
Sbjct: 61 caagcctgatacctataggtatcaggtctgatacc 95
Score = 52.0 bits (26), Expect = 9e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 63 ggtaccaagcctgatacctataggtatcaggtctgataccta 104
||||||| ||||||||||||| |||| ||||||||| |||||
Sbjct: 1 ggtaccaggcctgatacctatgggtaccaggtctgacaccta 42
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 7 aggtaccaggcctgatacctatgggtaccaggtctga 43
|||||||| ||||||||||||| |||| |||||||||
Sbjct: 55 aggtaccaagcctgatacctataggtatcaggtctga 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 72 cctgatacctataggtatcaggtctgatacctaggt 107
|||||||||||||||||||||| || |||||||||
Sbjct: 86 cctgatacctataggtatcaggcttggtacctaggt 51
>49552_osa-miRf10337-akr:pmrd
Length = 95
Score = 97.6 bits (49), Expect = 2e-21
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 1 gataccaggtaccaggcctgatacctatgggtaccaggtctgacacctaaccatgacacc 60
||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||
Sbjct: 95 gataccaggtaccaggcctgatacctacggataccaggtctgacacctaaccatgatacc 36
Query: 61 taggtacca 69
|| |||||
Sbjct: 35 cagatacca 27
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1 gataccaggtaccaggcctgataccta 27
|||||||||||||||||| ||||||||
Sbjct: 33 gataccaggtaccaggccggataccta 7
>50859_osa-miRf11644-akr:pmrd
Length = 98
Score = 79.8 bits (40), Expect = 4e-16
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 5 ccaggtaccaggcctgatacctatgggtaccaggtctgacacctaaccatga 56
||||| ||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 93 ccaggcaccaggcctgatatctacgggtaccaggtctgacacctaaccatga 42
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 1 gataccaggtaccaggcctgatacctatgggtacc 35
|||||||||||||||||||||||||||||||||||
Sbjct: 35 gataccaggtaccaggcctgatacctatgggtacc 1
>51148_osa-miRf11933-akr:pmrd
Length = 147
Score = 44.1 bits (22), Expect = 2e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 74 tgatacct-ataggtatcaggtctgatacctaggtatc 110
|||||||| ||||||||||| ||||||||||| |||||
Sbjct: 12 tgatacctcataggtatcagatctgatacctatgtatc 49
>50039_osa-miRf10824-akr:pmrd
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 83 taggtatcaggtctgataccta 104
||||||||||||||||||||||
Sbjct: 89 taggtatcaggtctgataccta 68
