miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>50876_osa-miRf11661-akr:pmrd
Length = 93
Score = 184 bits (93), Expect = 9e-48
Identities = 93/93 (100%)
Strand = Plus / Minus
Query: 8 ccacccggtcccatatgtcagcctccttccacgtttggacaaatgagatgtgggatcggg 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 ccacccggtcccatatgtcagcctccttccacgtttggacaaatgagatgtgggatcggg 34
Query: 68 tgatgaaggaggctgacatgtgagaccgggtgg 100
|||||||||||||||||||||||||||||||||
Sbjct: 33 tgatgaaggaggctgacatgtgagaccgggtgg 1
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 ccacccggtcccatatgtcagcctccttc 36
|||||||||| || |||||||||||||||
Sbjct: 1 ccacccggtctcacatgtcagcctccttc 29
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 72 gaaggaggctgacatgtgagaccgggtgg 100
||||||||||||||| || ||||||||||
Sbjct: 65 gaaggaggctgacatatgggaccgggtgg 93
>50875_osa-miRf11660-akr:pmrd
Length = 93
Score = 184 bits (93), Expect = 9e-48
Identities = 93/93 (100%)
Strand = Plus / Minus
Query: 8 ccacccggtcccatatgtcagcctccttccacgtttggacaaatgagatgtgggatcggg 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 ccacccggtcccatatgtcagcctccttccacgtttggacaaatgagatgtgggatcggg 34
Query: 68 tgatgaaggaggctgacatgtgagaccgggtgg 100
|||||||||||||||||||||||||||||||||
Sbjct: 33 tgatgaaggaggctgacatgtgagaccgggtgg 1
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 ccacccggtcccatatgtcagcctccttc 36
|||||||||| || |||||||||||||||
Sbjct: 1 ccacccggtctcacatgtcagcctccttc 29
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 72 gaaggaggctgacatgtgagaccgggtgg 100
||||||||||||||| || ||||||||||
Sbjct: 65 gaaggaggctgacatatgggaccgggtgg 93
>51092_osa-miRf11877-akr:pmrd
Length = 103
Score = 180 bits (91), Expect = 1e-46
Identities = 100/103 (97%)
Strand = Plus / Plus
Query: 3 atttgccacccggtcccatatgtcagcctccttccacgtttggacaaatgagatgtggga 62
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttgccatccggtcccatatgtcagcctccttccacgtttggacaaatgagatgtggga 60
Query: 63 tcgggtgatgaaggaggctgacatgtgagaccgggtggaaaat 105
|| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 tcaggtgatgaaggaggctgacatgtgagaccgggtagaaaat 103
>51093_osa-miRf11878-akr:pmrd
Length = 101
Score = 176 bits (89), Expect = 2e-45
Identities = 98/101 (97%)
Strand = Plus / Minus
Query: 4 tttgccacccggtcccatatgtcagcctccttccacgtttggacaaatgagatgtgggat 63
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 tttgccatccggtcccatatgtcagcctccttccacgtttggacaaatgagatgtgggat 42
Query: 64 cgggtgatgaaggaggctgacatgtgagaccgggtggaaaa 104
| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 41 caggtgatgaaggaggctgacatgtgagaccgggtagaaaa 1
>51094_osa-miRf11879-akr:pmrd
Length = 93
Score = 165 bits (83), Expect = 8e-42
Identities = 86/87 (98%)
Strand = Plus / Minus
Query: 12 ccggtcccatatgtcagcctccttccacgtttggacaaatgagatgtgggatcgggtgat 71
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 89 ccggtcccatatgtcagcctccttccacgtttggacaaatgagatgtgggatcaggtgat 30
Query: 72 gaaggaggctgacatgtgagaccgggt 98
|||||||||||||||||||||||||||
Sbjct: 29 gaaggaggctgacatgtgagaccgggt 3
>49967_osa-miRf10752-akr:pmrd
Length = 93
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 ccacccggtcccatatgtcagcctc 32
||||||||||||| |||||||||||
Sbjct: 1 ccacccggtcccacatgtcagcctc 25
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 76 gaggctgacatgtgagaccgggtgg 100
|||||||||||||| ||||||||||
Sbjct: 25 gaggctgacatgtgggaccgggtgg 1
>49966_osa-miRf10751-akr:pmrd
Length = 107
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 ccacccggtcccatatgtcagcctc 32
||||||||||||| |||||||||||
Sbjct: 8 ccacccggtcccacatgtcagcctc 32
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 76 gaggctgacatgtgagaccgggtgg 100
|||||||||||||| ||||||||||
Sbjct: 32 gaggctgacatgtgggaccgggtgg 8
