miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>50876_osa-miRf11661-akr:pmrd
Length = 93
Score = 184 bits (93), Expect = 7e-48
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 1 ccacccggtctcacatgtcagcctccttcatcacccgatcccacatctcatttgtccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccacccggtctcacatgtcagcctccttcatcacccgatcccacatctcatttgtccaaa 60
Query: 61 cgtggaaggaggctgacatatgggaccgggtgg 93
|||||||||||||||||||||||||||||||||
Sbjct: 61 cgtggaaggaggctgacatatgggaccgggtgg 93
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 65 gaaggaggctgacatatgggaccgggtgg 93
||||||||||||||| || ||||||||||
Sbjct: 29 gaaggaggctgacatgtgagaccgggtgg 1
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 ccacccggtctcacatgtcagcctccttc 29
|||||||||| || |||||||||||||||
Sbjct: 93 ccacccggtcccatatgtcagcctccttc 65
>50874_osa-miRf11659-akr:pmrd
Length = 107
Score = 184 bits (93), Expect = 7e-48
Identities = 93/93 (100%)
Strand = Plus / Minus
Query: 1 ccacccggtctcacatgtcagcctccttcatcacccgatcccacatctcatttgtccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 ccacccggtctcacatgtcagcctccttcatcacccgatcccacatctcatttgtccaaa 41
Query: 61 cgtggaaggaggctgacatatgggaccgggtgg 93
|||||||||||||||||||||||||||||||||
Sbjct: 40 cgtggaaggaggctgacatatgggaccgggtgg 8
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 ccacccggtctcacatgtcagcctccttc 29
|||||||||| || |||||||||||||||
Sbjct: 8 ccacccggtcccatatgtcagcctccttc 36
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 65 gaaggaggctgacatatgggaccgggtgg 93
||||||||||||||| || ||||||||||
Sbjct: 72 gaaggaggctgacatgtgagaccgggtgg 100
>51094_osa-miRf11879-akr:pmrd
Length = 93
Score = 165 bits (83), Expect = 7e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 3 acccggtctcacatgtcagcctccttcatcacccgatcccacatctcatttgtccaaacg 62
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 3 acccggtctcacatgtcagcctccttcatcacctgatcccacatctcatttgtccaaacg 62
Query: 63 tggaaggaggctgacatatgggaccgg 89
|||||||||||||||||||||||||||
Sbjct: 63 tggaaggaggctgacatatgggaccgg 89
>51093_osa-miRf11878-akr:pmrd
Length = 101
Score = 165 bits (83), Expect = 7e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 3 acccggtctcacatgtcagcctccttcatcacccgatcccacatctcatttgtccaaacg 62
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 7 acccggtctcacatgtcagcctccttcatcacctgatcccacatctcatttgtccaaacg 66
Query: 63 tggaaggaggctgacatatgggaccgg 89
|||||||||||||||||||||||||||
Sbjct: 67 tggaaggaggctgacatatgggaccgg 93
>51092_osa-miRf11877-akr:pmrd
Length = 103
Score = 165 bits (83), Expect = 7e-42
Identities = 86/87 (98%)
Strand = Plus / Minus
Query: 3 acccggtctcacatgtcagcctccttcatcacccgatcccacatctcatttgtccaaacg 62
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 96 acccggtctcacatgtcagcctccttcatcacctgatcccacatctcatttgtccaaacg 37
Query: 63 tggaaggaggctgacatatgggaccgg 89
|||||||||||||||||||||||||||
Sbjct: 36 tggaaggaggctgacatatgggaccgg 10
>49967_osa-miRf10752-akr:pmrd
Length = 93
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ccacccggtctcacatgtcagcctc 25
|||||||||| ||||||||||||||
Sbjct: 1 ccacccggtcccacatgtcagcctc 25
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 69 gaggctgacatatgggaccgggtgg 93
||||||||||| |||||||||||||
Sbjct: 25 gaggctgacatgtgggaccgggtgg 1
>49966_osa-miRf10751-akr:pmrd
Length = 107
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ccacccggtctcacatgtcagcctc 25
|||||||||| ||||||||||||||
Sbjct: 8 ccacccggtcccacatgtcagcctc 32
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 69 gaggctgacatatgggaccgggtgg 93
||||||||||| |||||||||||||
Sbjct: 32 gaggctgacatgtgggaccgggtgg 8
