miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31961_mmu-mir-292:mirbase
Length = 82
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 agcctgtgatactcaaactgggggctcttttggattttcatcggaagaaaagtgccgcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agcctgtgatactcaaactgggggctcttttggattttcatcggaagaaaagtgccgcca 61
Query: 61 ggttttgagtgtcaccggt 79
|||||||||||||||||||
Sbjct: 62 ggttttgagtgtcaccggt 80
>31962_mmu-mir-292:mirbase
Length = 82
Score = 157 bits (79), Expect = 1e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 agcctgtgatactcaaactgggggctcttttggattttcatcggaagaaaagtgccgcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agcctgtgatactcaaactgggggctcttttggattttcatcggaagaaaagtgccgcca 61
Query: 61 ggttttgagtgtcaccggt 79
|||||||||||||||||||
Sbjct: 62 ggttttgagtgtcaccggt 80
>32825_rno-mir-292:mirbase
Length = 82
Score = 117 bits (59), Expect = 1e-27
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 3 cctgtgatactcaaactgggggctcttttggattttcatcggaagaaaagtgccgccagg 62
||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||
Sbjct: 4 cctgtgatactcaaactgggggctcttttgggttttctttggaagaaaagtgccgccagg 63
Query: 63 ttttgagtgtcaccg 77
|||||||||| ||||
Sbjct: 64 ttttgagtgttaccg 78
>32826_rno-mir-292:mirbase
Length = 82
Score = 117 bits (59), Expect = 1e-27
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 3 cctgtgatactcaaactgggggctcttttggattttcatcggaagaaaagtgccgccagg 62
||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||
Sbjct: 4 cctgtgatactcaaactgggggctcttttgggttttctttggaagaaaagtgccgccagg 63
Query: 63 ttttgagtgtcaccg 77
|||||||||| ||||
Sbjct: 64 ttttgagtgttaccg 78
>33305_bta-mir-292:mirbase
Length = 79
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 50 aagtgccgccaggttttgagtgtcaccggt 79
||||||||||| ||||||||||| ||||||
Sbjct: 48 aagtgccgccatgttttgagtgttaccggt 77
>27870_mml-mir-371-1:mirbase
Length = 70
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 48 aaaagtgccgccaggttttgagtgt 72
||||||||||||| |||||||||||
Sbjct: 43 aaaagtgccgccatgttttgagtgt 67
>27871_mml-mir-371-1:mirbase
Length = 70
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 48 aaaagtgccgccaggttttgagtgt 72
||||||||||||| |||||||||||
Sbjct: 43 aaaagtgccgccatgttttgagtgt 67
>27873_mml-mir-371-2:mirbase
Length = 70
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 48 aaaagtgccgccaggttttgagtgt 72
||||||||||||| |||||||||||
Sbjct: 43 aaaagtgccgccatgttttgagtgt 67
>27872_mml-mir-371-2:mirbase
Length = 70
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 48 aaaagtgccgccaggttttgagtgt 72
||||||||||||| |||||||||||
Sbjct: 43 aaaagtgccgccatgttttgagtgt 67
>32821_rno-mir-290:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 48 aaaagtgccgccaggtttt 66
|||||||||||||||||||
Sbjct: 46 aaaagtgccgccaggtttt 64
