miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>31881_mmu-mir-147:mirbase
          Length = 79

 Score =  121 bits (61), Expect = 1e-28
 Identities = 73/77 (94%)
 Strand = Plus / Plus

                                                                      
Query: 13 tgaatttagtggaaacatttttgcacaaagtagatgttgatgcaagtgtgcggaaatgct 72
          ||||| |||||||||||||| |||||||| ||||||||||||| ||||||||||||||||
Sbjct: 3  tgaatctagtggaaacatttctgcacaaactagatgttgatgccagtgtgcggaaatgct 62

                           
Query: 73 tctgctacatttgtagg 89
          |||||||||||||||||
Sbjct: 63 tctgctacatttgtagg 79




>32754_rno-mir-147:mirbase
          Length = 79

 Score = 89.7 bits (45), Expect = 3e-19
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                      
Query: 13 tgaatttagtggaaacatttttgcacaaagtagatgttgatgcaagtgtgcggaaatgct 72
          ||||| ||||||||||| || |||||||| | ||| ||||||| ||||||||||||||||
Sbjct: 3  tgaatctagtggaaacacttctgcacaaactcgattttgatgccagtgtgcggaaatgct 62

                           
Query: 73 tctgctacatttgtagg 89
          |||||||||||| ||||
Sbjct: 63 tctgctacatttttagg 79




>26722_cfa-mir-147:mirbase
          Length = 86

 Score = 69.9 bits (35), Expect = 3e-13
 Identities = 69/79 (87%), Gaps = 1/79 (1%)
 Strand = Plus / Plus

                                                                      
Query: 13 tgaatttagtggaaacatttttgcacaaagtagatgttg-atgcaagtgtgcggaaatgc 71
          ||||| |||||||||||||  |||||||| |||||  || || | |||||||||||||||
Sbjct: 7  tgaatctagtggaaacattgctgcacaaactagattatggataccagtgtgcggaaatgc 66

                             
Query: 72 ttctgctacatttgtaggg 90
          ||||||||||||| |||||
Sbjct: 67 ttctgctacatttttaggg 85




>28470_hsa-mir-147b:mirbase
          Length = 80

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 63/72 (87%), Gaps = 1/72 (1%)
 Strand = Plus / Plus

                                                                      
Query: 19 tagtggaaacatttttgcacaaagtagatgttg-atgcaagtgtgcggaaatgcttctgc 77
          |||||||||||||| |||||||| |||||  || |  | |||||||||||||||||||||
Sbjct: 9  tagtggaaacatttctgcacaaactagattctggacaccagtgtgcggaaatgcttctgc 68

                      
Query: 78 tacatttgtagg 89
          ||||||| ||||
Sbjct: 69 tacatttttagg 80




>30241_ptr-mir-147b:mirbase
          Length = 79

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 63/72 (87%), Gaps = 1/72 (1%)
 Strand = Plus / Plus

                                                                      
Query: 19 tagtggaaacatttttgcacaaagtagatgttg-atgcaagtgtgcggaaatgcttctgc 77
          |||||||||||||| |||||||| |||||  || |  | |||||||||||||||||||||
Sbjct: 8  tagtggaaacatttctgcacaaactagattctggacaccagtgtgcggaaatgcttctgc 67

                      
Query: 78 tacatttgtagg 89
          ||||||| ||||
Sbjct: 68 tacatttttagg 79




>30854_ppy-mir-147b:mirbase
          Length = 80

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 63/72 (87%), Gaps = 1/72 (1%)
 Strand = Plus / Plus

                                                                      
Query: 19 tagtggaaacatttttgcacaaagtagatgttg-atgcaagtgtgcggaaatgcttctgc 77
          |||||||||||||| |||||||| |||||  || |  | |||||||||||||||||||||
Sbjct: 9  tagtggaaacatttctgcacaaactagattctggacaccagtgtgcggaaatgcttctgc 68

                      
Query: 78 tacatttgtagg 89
          ||||||| ||||
Sbjct: 69 tacatttttagg 80




>33234_bta-mir-147:mirbase
          Length = 80

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 57 agtgtgcggaaatgcttctgctacatttgtagg 89
          |||||||||||||||||||||||||||| ||||
Sbjct: 48 agtgtgcggaaatgcttctgctacatttttagg 80




>26478_tgu-mir-147:mirbase
          Length = 70

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 57 agtgtgcggaaatgcttctgctacattt 84
          ||||||||||||||||||||||||||||
Sbjct: 40 agtgtgcggaaatgcttctgctacattt 67




>25969_gga-mir-147-1:mirbase
          Length = 70

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 57 agtgtgcggaaatgcttctgctacatt 83
          |||||||||||||||||||||||||||
Sbjct: 44 agtgtgcggaaatgcttctgctacatt 70




>25970_gga-mir-147-2:mirbase
          Length = 70

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 57 agtgtgcggaaatgcttctgctacatt 83
          |||||||||||||||||||||||||||
Sbjct: 44 agtgtgcggaaatgcttctgctacatt 70




>27049_eca-mir-147b:mirbase
          Length = 80

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                           
Query: 57 agtgtgcggaaatgcttctgctacatttgtagg 89
          ||||||| |||||||||||||||||||| ||||
Sbjct: 48 agtgtgccgaaatgcttctgctacatttttagg 80




>27396_mdo-mir-147b:mirbase
          Length = 82

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                           
Query: 57 agtgtgcggaaatgcttctgctacatttgtagg 89
          ||||||||||| |||||||||||||||| ||||
Sbjct: 50 agtgtgcggaagtgcttctgctacatttttagg 82




>27754_mml-mir-147a:mirbase
          Length = 72

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 57 agtgtgcggaaatgcttctgctacatt 83
          |||||| ||||||||||||||||||||
Sbjct: 46 agtgtgtggaaatgcttctgctacatt 72




>28217_mne-mir-147:mirbase
          Length = 72

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 57 agtgtgcggaaatgcttctgctacatt 83
          |||||| ||||||||||||||||||||
Sbjct: 46 agtgtgtggaaatgcttctgctacatt 72




>27755_mml-mir-147b:mirbase
          Length = 80

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                           
Query: 57 agtgtgcggaaatgcttctgctacatttgtagg 89
          ||||||||||| |||||||||| ||||| ||||
Sbjct: 48 agtgtgcggaagtgcttctgctgcatttttagg 80