miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39464_ppt-MIR166a:mirbase
Length = 102
Score = 202 bits (102), Expect = 4e-53
Identities = 102/102 (100%)
Strand = Plus / Plus
Query: 1 tctgctgtgaggaatgccccctggcccgaagccatgtgccttttcatgtccacgtggggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctgctgtgaggaatgccccctggcccgaagccatgtgccttttcatgtccacgtggggt 60
Query: 61 aaacattaaagcttcggaccaggcttcattcccctcagcaca 102
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaacattaaagcttcggaccaggcttcattcccctcagcaca 102
>39467_ppt-MIR166d:mirbase
Length = 128
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 65 attaaagcttcggaccaggcttcattcccctc 96
||||||||||||||||||||||||||||||||
Sbjct: 73 attaaagcttcggaccaggcttcattcccctc 104
>39465_ppt-MIR166b:mirbase
Length = 103
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 71 gcttcggaccaggcttcattcccctcagcaca 102
||||||||||||||||||||||||||||||||
Sbjct: 71 gcttcggaccaggcttcattcccctcagcaca 102
>41588_vvi-MIR166f:mirbase
Length = 100
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 68 aaagcttcggaccaggcttcattcccctcagcaca 102
|||||||||||||||||||||||||||||| ||||
Sbjct: 63 aaagcttcggaccaggcttcattcccctcaacaca 97
>39470_ppt-MIR166g:mirbase
Length = 146
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 69 aagcttcggaccaggcttcattcccctcagc 99
|||||||||||||||||||||||||||||||
Sbjct: 91 aagcttcggaccaggcttcattcccctcagc 121
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 1 tctgctgtgaggaatgccccctggcccgaagccatgt 37
||||||| ||||||||||||||||||||||| |||||
Sbjct: 24 tctgctgcgaggaatgccccctggcccgaaggcatgt 60
>39466_ppt-MIR166c:mirbase
Length = 123
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 68 aaagcttcggaccaggcttcattcccctc 96
|||||||||||||||||||||||||||||
Sbjct: 71 aaagcttcggaccaggcttcattcccctc 99
>41327_ptc-MIR166f:mirbase
Length = 105
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 66 ttaaagcttcggaccaggcttcattcccctca 97
|||| |||||||||||||||||||||||||||
Sbjct: 68 ttaaggcttcggaccaggcttcattcccctca 99
>41325_ptc-MIR166d:mirbase
Length = 105
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 66 ttaaagcttcggaccaggcttcattcccctca 97
|||| |||||||||||||||||||||||||||
Sbjct: 68 ttaaggcttcggaccaggcttcattcccctca 99
>40672_mtr-MIR166e:mirbase
Length = 106
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 71 gcttcggaccaggcttcattcccctca 97
|||||||||||||||||||||||||||
Sbjct: 78 gcttcggaccaggcttcattcccctca 104
>39469_ppt-MIR166f:mirbase
Length = 123
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 69 aagcttcggaccaggcttcattcccctcagc 99
|||| ||||||||||||||||||||||||||
Sbjct: 69 aagcctcggaccaggcttcattcccctcagc 99
>39468_ppt-MIR166e:mirbase
Length = 146
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcccctcagc 99
|||||||||||||||||||||||||||
Sbjct: 95 ttcggaccaggcttcattcccctcagc 121
Score = 42.1 bits (21), Expect = 8e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 3 tgctgtgaggaatgccccctggcccgaagccatgtgc 39
|||||||||||||||| | ||| ||||||| ||||||
Sbjct: 26 tgctgtgaggaatgccgcatggaccgaagctatgtgc 62
>39735_smo-MIR166c:mirbase
Length = 138
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcagc 99
||||||||||||||||||||||||||
Sbjct: 107 tcggaccaggcttcattcccctcagc 132
>41937_osa-MIR166a:mirbase
Length = 145
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcag 98
|||||||||||||||||||||||||
Sbjct: 110 tcggaccaggcttcattcccctcag 134
>41745_bdi-MIR166c:mirbase
Length = 172
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcag 98
|||||||||||||||||||||||||
Sbjct: 121 tcggaccaggcttcattcccctcag 145
>41589_vvi-MIR166g:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcccctca 97
|||||||||||||||||||||||||
Sbjct: 68 ttcggaccaggcttcattcccctca 92
>41531_sly-MIR166a:mirbase
Length = 111
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcccctca 97
|||||||||||||||||||||||||
Sbjct: 85 ttcggaccaggcttcattcccctca 109
>39734_smo-MIR166b:mirbase
Length = 136
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcag 98
|||||||||||||||||||||||||
Sbjct: 99 tcggaccaggcttcattcccctcag 123
>39472_ppt-MIR166i:mirbase
Length = 120
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 71 gcttcggaccaggcttcattcccct 95
|||||||||||||||||||||||||
Sbjct: 71 gcttcggaccaggcttcattcccct 95
>42724_zma-MIR166h:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 71 gcttcggaccaggcttcattcccc 94
||||||||||||||||||||||||
Sbjct: 53 gcttcggaccaggcttcattcccc 76
>42722_zma-MIR166f:mirbase
Length = 78
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 71 gcttcggaccaggcttcattcccc 94
||||||||||||||||||||||||
Sbjct: 55 gcttcggaccaggcttcattcccc 78
>42517_sbi-MIR166j:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 85 tcggaccaggcttcattcccctca 108
>42509_sbi-MIR166b:mirbase
Length = 72
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 71 gcttcggaccaggcttcattcccc 94
||||||||||||||||||||||||
Sbjct: 49 gcttcggaccaggcttcattcccc 72
>41950_osa-MIR166n:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 71 gcttcggaccaggcttcattcccc 94
||||||||||||||||||||||||
Sbjct: 61 gcttcggaccaggcttcattcccc 84
>41942_osa-MIR166f:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 72 tcggaccaggcttcattcccctca 95
>41940_osa-MIR166d:mirbase
Length = 125
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 91 tcggaccaggcttcattcccctca 114
>41747_bdi-MIR166e:mirbase
Length = 151
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 99 tcggaccaggcttcattcccctca 122
>41586_vvi-MIR166d:mirbase
Length = 160
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 129 tcggaccaggcttcattcccctca 152
>41334_ptc-MIR166m:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattcccctca 99
>41333_ptc-MIR166l:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 68 tcggaccaggcttcattcccctca 91
>41330_ptc-MIR166i:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccctca 97
>41171_aqc-MIR166e:mirbase
Length = 147
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 121 tcggaccaggcttcattcccctca 144
>40266_bna-MIR166c:mirbase
Length = 128
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 93 tcggaccaggcttcattcccctca 116
>40265_bna-MIR166b:mirbase
Length = 118
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 91 tcggaccaggcttcattcccctca 114
>40038_ath-MIR166g:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 85 tcggaccaggcttcattcccctca 108
>40037_ath-MIR166f:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 78 tcggaccaggcttcattcccctca 101
>40036_ath-MIR166e:mirbase
Length = 143
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 119 tcggaccaggcttcattcccctca 142
>39827_aly-MIR166g:mirbase
Length = 131
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 89 tcggaccaggcttcattcccctca 112
>39826_aly-MIR166f:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 78 tcggaccaggcttcattcccctca 101
>39825_aly-MIR166e:mirbase
Length = 200
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 150 tcggaccaggcttcattcccctca 173
>39733_smo-MIR166a:mirbase
Length = 145
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 108 tcggaccaggcttcattcccctca 131
>39474_ppt-MIR166k:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 69 aagcttcggaccaggcttcattcccctc 96
||||| ||||||||||||||||||||||
Sbjct: 73 aagctccggaccaggcttcattcccctc 100
>39473_ppt-MIR166j:mirbase
Length = 131
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 69 aagcttcggaccaggcttcattcccctc 96
||||| ||||||||||||||||||||||
Sbjct: 77 aagctccggaccaggcttcattcccctc 104
>39421_pta-MIR166b:mirbase
Length = 125
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 90 tcggaccaggcttcattcccctca 113
>40032_ath-MIR166a:mirbase
Length = 170
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 72 cttcggaccaggcttcattcccc 94
|||||||||||||||||||||||
Sbjct: 132 cttcggaccaggcttcattcccc 154
>39471_ppt-MIR166h:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcccct 95
|||||||||||||||||||||||
Sbjct: 77 ttcggaccaggcttcattcccct 99
>42723_zma-MIR166g:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 105 ttcggaccaggcttcattcccc 126
>42510_sbi-MIR166c:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 73 ttcggaccaggcttcattcccc 94
>41939_osa-MIR166c:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 90 ttcggaccaggcttcattcccc 111
>41886_hvu-MIR166c:mirbase
Length = 78
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 57 ttcggaccaggcttcattcccc 78
>41885_hvu-MIR166b:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 81 ttcggaccaggcttcattcccc 102
>41884_hvu-MIR166:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 69 ttcggaccaggcttcattcccc 90
>41746_bdi-MIR166d:mirbase
Length = 165
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 112 ttcggaccaggcttcattcccc 133
>41743_bdi-MIR166a:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 84 ttcggaccaggcttcattcccc 105
>41326_ptc-MIR166e:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 76 ttcggaccaggcttcattcccc 97
>41323_ptc-MIR166b:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 76 ttcggaccaggcttcattcccc 97
>41224_csi-MIR166c:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 99 ttcggaccaggcttcattcccc 120
>41168_aqc-MIR166b:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 67 ttcggaccaggcttcattcccc 88
>41167_aqc-MIR166a:mirbase
Length = 111
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcagc 99
||||||||||||||||||| ||||||
Sbjct: 86 tcggaccaggcttcattcctctcagc 111
>41094_tcc-MIR166a:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 77 ttcggaccaggcttcattcccc 98
>40349_rco-MIR166c:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 65 ttcggaccaggcttcattcccc 86
>40347_rco-MIR166a:mirbase
Length = 149
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccct 95
||||||||||||||||||||||
Sbjct: 124 tcggaccaggcttcattcccct 145
>40267_bna-MIR166d:mirbase
Length = 128
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcagc 99
||||||||||||||||||||| ||||
Sbjct: 77 tcggaccaggcttcattccccccagc 102
>39475_ppt-MIR166l:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 cggaccaggcttcattcccctc 96
||||||||||||||||||||||
Sbjct: 85 cggaccaggcttcattcccctc 106
