miRNEST 2.0, an integrative microRNA resource :: BLAST
>32764_rno-mir-181b-1:mirbase
Length = 110
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 gtttacaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 gtttacaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagc 76
Query: 61 tcactgaacaatgaatgcaactgtggccccgctt 94
||||||||||||||||||||||||||||||||||
Sbjct: 77 tcactgaacaatgaatgcaactgtggccccgctt 110
>27769_mml-mir-181b-1:mirbase
Length = 110
Score = 167 bits (84), Expect = 2e-42
Identities = 87/88 (98%)
Strand = Plus / Plus
Query: 7 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactg 66
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 23 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcactg 82
Query: 67 aacaatgaatgcaactgtggccccgctt 94
||||||||||||||||||||||||||||
Sbjct: 83 aacaatgaatgcaactgtggccccgctt 110
>28223_mne-mir-181b:mirbase
Length = 110
Score = 167 bits (84), Expect = 2e-42
Identities = 87/88 (98%)
Strand = Plus / Plus
Query: 7 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactg 66
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 23 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcactg 82
Query: 67 aacaatgaatgcaactgtggccccgctt 94
||||||||||||||||||||||||||||
Sbjct: 83 aacaatgaatgcaactgtggccccgctt 110
>27579_lla-mir-181b:mirbase
Length = 110
Score = 159 bits (80), Expect = 4e-40
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 7 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactg 66
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 23 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcactg 82
Query: 67 aacaatgaatgcaactgtggccccgctt 94
||||||||||||||||||||||||||||
Sbjct: 83 aacaatgaatgcaactgtggccccgctt 110
>28315_ggo-mir-181b:mirbase
Length = 110
Score = 159 bits (80), Expect = 4e-40
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 7 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactg 66
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 23 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcactg 82
Query: 67 aacaatgaatgcaactgtggccccgctt 94
||||||||||||||||||||||||||||
Sbjct: 83 aacaatgaatgcaactgtggccccgctt 110
>28485_hsa-mir-181b-1:mirbase
Length = 110
Score = 159 bits (80), Expect = 4e-40
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 7 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactg 66
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 23 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcactg 82
Query: 67 aacaatgaatgcaactgtggccccgctt 94
||||||||||||||||||||||||||||
Sbjct: 83 aacaatgaatgcaactgtggccccgctt 110
>30104_ppa-mir-181b:mirbase
Length = 110
Score = 159 bits (80), Expect = 4e-40
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 7 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactg 66
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 23 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcactg 82
Query: 67 aacaatgaatgcaactgtggccccgctt 94
||||||||||||||||||||||||||||
Sbjct: 83 aacaatgaatgcaactgtggccccgctt 110
>30867_ppy-mir-181b:mirbase
Length = 110
Score = 159 bits (80), Expect = 4e-40
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 7 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactg 66
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 23 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcactg 82
Query: 67 aacaatgaatgcaactgtggccccgctt 94
||||||||||||||||||||||||||||
Sbjct: 83 aacaatgaatgcaactgtggccccgctt 110
>31894_mmu-mir-181b-1:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 9 aggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactgaa 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactgaa 60
Query: 69 caatgaatgcaactgtggcc 88
||||||||||||||||||||
Sbjct: 61 caatgaatgcaactgtggcc 80
>30253_ptr-mir-181b-1:mirbase
Length = 108
Score = 155 bits (78), Expect = 7e-39
Identities = 84/86 (97%)
Strand = Plus / Plus
Query: 7 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactg 66
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 23 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcactg 82
Query: 67 aacaatgaatgcaactgtggccccgc 92
||||||||||||||||||||||||||
Sbjct: 83 aacaatgaatgcaactgtggccccgc 108
>34008_ssc-mir-181b-1:mirbase
Length = 80
Score = 151 bits (76), Expect = 1e-37
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 10 ggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactgaac 69
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 ggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcactgaac 60
Query: 70 aatgaatgcaactgtggccc 89
||||||||||||||||||||
Sbjct: 61 aatgaatgcaactgtggccc 80
>33246_bta-mir-181b-1:mirbase
Length = 110
Score = 147 bits (74), Expect = 2e-36
Identities = 83/86 (96%)
Strand = Plus / Plus
Query: 7 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactg 66
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 23 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcactg 82
Query: 67 aacaatgaatgcaactgtggccccgc 92
|||||||| |||||||||||||||||
Sbjct: 83 aacaatgagtgcaactgtggccccgc 108
>25976_gga-mir-181b-1:mirbase
Length = 89
Score = 135 bits (68), Expect = 6e-33
Identities = 80/84 (95%)
Strand = Plus / Plus
Query: 7 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactg 66
||||||||||||||||||||||||||||||||||||| |||| ||| || ||||||||||
Sbjct: 2 aaaggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcactg 61
Query: 67 aacaatgaatgcaactgtggcccc 90
||||||||||||||||||||||||
Sbjct: 62 aacaatgaatgcaactgtggcccc 85
>27404_mdo-mir-181b:mirbase
Length = 87
Score = 133 bits (67), Expect = 3e-32
Identities = 79/83 (95%)
Strand = Plus / Plus
Query: 8 aaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactga 67
|||||||||||||||||||||||||||||||||||| |||||| | || |||||||||||
Sbjct: 1 aaggtcacaatcaacattcattgctgtcggtgggtttaactgtatggacaagctcactga 60
Query: 68 acaatgaatgcaactgtggcccc 90
|||||||||||||||||||||||
Sbjct: 61 acaatgaatgcaactgtggcccc 83
>34612_fru-mir-181b-1:mirbase
Length = 87
Score = 117 bits (59), Expect = 2e-27
Identities = 74/79 (93%)
Strand = Plus / Plus
Query: 7 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactg 66
||||||||||||||||||||||||||||||||||||| |||||| | ||| |||||||||
Sbjct: 1 aaaggtcacaatcaacattcattgctgtcggtgggtttaactgtatggaagagctcactg 60
Query: 67 aacaatgaatgcaactgtg 85
||| |||||||||||||||
Sbjct: 61 aacgatgaatgcaactgtg 79
>34759_tni-mir-181b-1:mirbase
Length = 87
Score = 117 bits (59), Expect = 2e-27
Identities = 74/79 (93%)
Strand = Plus / Plus
Query: 7 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactg 66
||||||||||||||||||||||||||||||||||||| |||||| | ||| |||||||||
Sbjct: 1 aaaggtcacaatcaacattcattgctgtcggtgggtttaactgtatggaagagctcactg 60
Query: 67 aacaatgaatgcaactgtg 85
||| |||||||||||||||
Sbjct: 61 aacgatgaatgcaactgtg 79
>26485_tgu-mir-181b-1:mirbase
Length = 74
Score = 107 bits (54), Expect = 1e-24
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 10 ggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactgaac 69
||||||||| |||||||||||||||||||||||| |||| ||| || |||||||||||||
Sbjct: 1 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 60
Query: 70 aatgaatgcaactg 83
||||||||||||||
Sbjct: 61 aatgaatgcaactg 74
>26733_cfa-mir-181b-1:mirbase
Length = 62
Score = 107 bits (54), Expect = 1e-24
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 20 aacattcattgctgtcggtgggttgaactgtgtagaaaagctcactgaacaatgaatgca 79
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 1 aacattcattgctgtcggtgggttgaactgtgtggacaagctcactgaacaatgaatgca 60
Query: 80 ac 81
||
Sbjct: 61 ac 62
>31511_oan-mir-181b:mirbase
Length = 110
Score = 101 bits (51), Expect = 9e-23
Identities = 75/83 (90%)
Strand = Plus / Plus
Query: 5 acaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcac 64
||||||||| |||| |||||||||||||||||||||||| |||| || || ||||||||
Sbjct: 12 acaaaggtcccaatgaacattcattgctgtcggtgggtttaactctgaggacaagctcac 71
Query: 65 tgaacaatgaatgcaactgtggc 87
||||||||||||| |||||||||
Sbjct: 72 tgaacaatgaatggaactgtggc 94
>25805_xtr-mir-181b-1:mirbase
Length = 83
Score = 85.7 bits (43), Expect = 5e-18
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 8 aaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactga 67
|||||||||||||||||||||||||||||||||||||| | | | | |||||| ||||
Sbjct: 1 aaggtcacaatcaacattcattgctgtcggtgggttgagttaagaacacaagctcgctga 60
Query: 68 acaatgaatgcaactgtggcccc 90
|| ||||||||||||||| ||||
Sbjct: 61 acgatgaatgcaactgtgtcccc 83
>34330_dre-mir-181b-1:mirbase
Length = 109
Score = 73.8 bits (37), Expect = 2e-14
Identities = 73/84 (86%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 6 caaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcact 65
||||||||| |||||||||||||||||||||||||||| | ||| || ||||| ||
Sbjct: 23 caaaggtcataatcaacattcattgctgtcggtgggtttagtcttgt--aacagctctct 80
Query: 66 gaacaatgaatgcaactgtggccc 89
|||||||||||| |||||||||||
Sbjct: 81 gaacaatgaatgtaactgtggccc 104
>25806_xtr-mir-181b-2:mirbase
Length = 83
Score = 69.9 bits (35), Expect = 3e-13
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 15 caatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactgaacaatga 74
|||| ||||||||||||||||||||||||| | || |||||||||||| ||| ||||||
Sbjct: 9 caataaacattcattgctgtcggtgggttgta--gtttagaaaagctcattgatcaatga 66
Query: 75 atgcaa 80
||||||
Sbjct: 67 atgcaa 72
>27772_mml-mir-181d:mirbase
Length = 137
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 8 aaggtcacaatcaacattcattgctgtcggtgggttg 44
||||||||||||||||||||||| |||||||||||||
Sbjct: 24 aaggtcacaatcaacattcattgttgtcggtgggttg 60
>30870_ppy-mir-181d:mirbase
Length = 136
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 8 aaggtcacaatcaacattcattgctgtcggtgggttg 44
||||||||||||||||||||||| |||||||||||||
Sbjct: 23 aaggtcacaatcaacattcattgttgtcggtgggttg 59
>33249_bta-mir-181d:mirbase
Length = 113
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 8 aaggtcacaatcaacattcattgctgtcggtgggttg 44
||||||||||||||||||||||| |||||||||||||
Sbjct: 23 aaggtcacaatcaacattcattgttgtcggtgggttg 59
>28488_hsa-mir-181d:mirbase
Length = 137
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 9 aggtcacaatcaacattcattgctgtcggtgggttg 44
|||||||||||||||||||||| |||||||||||||
Sbjct: 25 aggtcacaatcaacattcattgttgtcggtgggttg 60
>30256_ptr-mir-181d:mirbase
Length = 136
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 9 aggtcacaatcaacattcattgctgtcggtgggttg 44
|||||||||||||||||||||| |||||||||||||
Sbjct: 24 aggtcacaatcaacattcattgttgtcggtgggttg 59
>31512_oan-mir-181c:mirbase
Length = 95
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 11 gtcacaatcaacattcattgctgtcggtgggttg 44
||||||||||||||||||| ||||||||||||||
Sbjct: 10 gtcacaatcaacattcattactgtcggtgggttg 43
>25977_gga-mir-181b-2:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 15 caatcaacattcattgctgtcggtgggtt 43
|||||||||||||||||||||||||||||
Sbjct: 11 caatcaacattcattgctgtcggtgggtt 39
>26486_tgu-mir-181b-2:mirbase
Length = 74
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 15 caatcaacattcattgctgtcggtgggtt 43
|||||||||||||||||||||||||||||
Sbjct: 6 caatcaacattcattgctgtcggtgggtt 34
>34011_ssc-mir-181d:mirbase
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 12 tcacaatcaacattcattgctgtcggtgggttg 44
||||||||||||||||||| |||||||||||||
Sbjct: 1 tcacaatcaacattcattgttgtcggtgggttg 33
>34012_ssc-mir-181d:mirbase
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 12 tcacaatcaacattcattgctgtcggtgggttg 44
||||||||||||||||||| |||||||||||||
Sbjct: 1 tcacaatcaacattcattgttgtcggtgggttg 33
>32767_rno-mir-181d:mirbase
Length = 83
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 10 ggtcacaatcaacattcattgctgtcggtgggttg 44
||||||||| ||||||||||| |||||||||||||
Sbjct: 1 ggtcacaattaacattcattgttgtcggtgggttg 35
>27062_eca-mir-181b:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 tcaacattcattgctgtcggtgggtt 43
||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>27770_mml-mir-181b-2:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 tcaacattcattgctgtcggtgggtt 43
||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>28486_hsa-mir-181b-2:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 tcaacattcattgctgtcggtgggtt 43
||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>30254_ptr-mir-181b-2:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 tcaacattcattgctgtcggtgggtt 43
||||||||||||||||||||||||||
Sbjct: 13 tcaacattcattgctgtcggtgggtt 38
>30868_ppy-mir-181b-2:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 tcaacattcattgctgtcggtgggtt 43
||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>31895_mmu-mir-181b-2:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 tcaacattcattgctgtcggtgggtt 43
||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>32765_rno-mir-181b-2:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 tcaacattcattgctgtcggtgggtt 43
||||||||||||||||||||||||||
Sbjct: 13 tcaacattcattgctgtcggtgggtt 38
>33247_bta-mir-181b-2:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 tcaacattcattgctgtcggtgggtt 43
||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>34009_ssc-mir-181b-2:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 tcaacattcattgctgtcggtgggtt 43
||||||||||||||||||||||||||
Sbjct: 11 tcaacattcattgctgtcggtgggtt 36
>34331_dre-mir-181b-2:mirbase
Length = 86
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 15 caatcaacattcattgctgtcggtgggtt 43
|||| ||||||||||||||||||||||||
Sbjct: 11 caataaacattcattgctgtcggtgggtt 39
>34613_fru-mir-181b-2:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 15 caatcaacattcattgctgtcggtgggtt 43
|||| ||||||||||||||||||||||||
Sbjct: 6 caataaacattcattgctgtcggtgggtt 34
>34760_tni-mir-181b-2:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 15 caatcaacattcattgctgtcggtgggtt 43
|||| ||||||||||||||||||||||||
Sbjct: 6 caataaacattcattgctgtcggtgggtt 34
>26734_cfa-mir-181b-2:mirbase
Length = 60
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 aacattcattgctgtcggtgggtt 43
||||||||||||||||||||||||
Sbjct: 1 aacattcattgctgtcggtgggtt 24
>31897_mmu-mir-181d:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 14 acaatcaacattcattgctgtcggtgggttg 44
||||| ||||||||||| |||||||||||||
Sbjct: 1 acaattaacattcattgttgtcggtgggttg 31
>34332_dre-mir-181c:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 acattcattgctgtcggtgggtt 43
|||||||||||||||||||||||
Sbjct: 13 acattcattgctgtcggtgggtt 35
>26736_cfa-mir-181d:mirbase
Length = 64
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 aacattcattgctgtcggtgggttg 44
||||||||||| |||||||||||||
Sbjct: 1 aacattcattgttgtcggtgggttg 25
