miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39502_ppt-MIR477h:mirbase
Length = 155
Score = 307 bits (155), Expect = 1e-84
Identities = 155/155 (100%)
Strand = Plus / Plus
Query: 1 tcagagggagtatactcaggtgtttgtttttctccctcaaaggcttccaactacatcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcagagggagtatactcaggtgtttgtttttctccctcaaaggcttccaactacatcagc 60
Query: 61 attctattccacttctggcttaagatgcagtgaatttgcgttgttgttggatgccttagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attctattccacttctggcttaagatgcagtgaatttgcgttgttgttggatgccttagt 120
Query: 121 gggagatgtacatacccctgtcattgatgtgttgc 155
|||||||||||||||||||||||||||||||||||
Sbjct: 121 gggagatgtacatacccctgtcattgatgtgttgc 155
>39499_ppt-MIR477f:mirbase
Length = 127
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 20 gtgtttgtttttctccctcaaaggcttccaac 51
||||||||||||||||||||||||||||||||
Sbjct: 1 gtgtttgtttttctccctcaaaggcttccaac 32
>39501_ppt-MIR477g:mirbase
Length = 128
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 20 gtgtttgtttttctccctcaaaggcttccaac 51
||||| ||||||||||||||||||||||||||
Sbjct: 1 gtgttcgtttttctccctcaaaggcttccaac 32
>39500_ppt-MIR477g:mirbase
Length = 128
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 20 gtgtttgtttttctccctcaaaggcttccaac 51
||||| ||||||||||||||||||||||||||
Sbjct: 1 gtgttcgtttttctccctcaaaggcttccaac 32
>39498_ppt-MIR477e:mirbase
Length = 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tctccctcaaaggcttccaac 51
|||||||||||||||||||||
Sbjct: 35 tctccctcaaaggcttccaac 55
>39497_ppt-MIR477d:mirbase
Length = 154
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tctccctcaaaggcttccaac 51
|||||||||||||||||||||
Sbjct: 32 tctccctcaaaggcttccaac 52
>39496_ppt-MIR477c:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tctccctcaaaggcttccaac 51
|||||||||||||||||||||
Sbjct: 13 tctccctcaaaggcttccaac 33
>39495_ppt-MIR477b:mirbase
Length = 170
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tctccctcaaaggcttccaac 51
|||||||||||||||||||||
Sbjct: 35 tctccctcaaaggcttccaac 55
>39494_ppt-MIR477a:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tctccctcaaaggcttccaac 51
|||||||||||||||||||||
Sbjct: 13 tctccctcaaaggcttccaac 33
>39493_ppt-MIR477a:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 tctccctcaaaggcttccaac 51
|||||||||||||||||||||
Sbjct: 13 tctccctcaaaggcttccaac 33
>41685_vvi-MIR477:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tctccctcaaaggcttccaa 50
||||||||||||||||||||
Sbjct: 12 tctccctcaaaggcttccaa 31
