miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39523_ppt-MIR536b:mirbase
Length = 222
Score = 440 bits (222), Expect = e-124
Identities = 222/222 (100%)
Strand = Plus / Plus
Query: 1 gtcggcagttttcgtatttcgccgacttcggtgactgcagaaagtcgaaacagtagagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcggcagttttcgtatttcgccgacttcggtgactgcagaaagtcgaaacagtagagag 60
Query: 61 cctgttgaattgcagcggtagacttgtctggcatcatttggtagtcgtcaaacttattct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cctgttgaattgcagcggtagacttgtctggcatcatttggtagtcgtcaaacttattct 120
Query: 121 ccccgagttgtagcggaatgataccagaaattcgtgccaagctgtgtgcaaccaaggggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccccgagttgtagcggaatgataccagaaattcgtgccaagctgtgtgcaaccaaggggt 180
Query: 181 ttgttacttaagatccacatgggaggagcgtccctaccagca 222
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgttacttaagatccacatgggaggagcgtccctaccagca 222
>39525_ppt-MIR536d:mirbase
Length = 443
Score = 85.7 bits (43), Expect = 1e-17
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 128 ttgtagcggaatgataccagaaattcgtgccaagctgtgtgcaaccaaggggtttgttac 187
||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 373 ttgtagcggaaagatgttagaatttcgtgccaagctgtgtgcaaccaaggggtttgttac 432
Query: 188 ttaagatccac 198
|| | ||||||
Sbjct: 433 ttcaaatccac 443
>39526_ppt-MIR536e:mirbase
Length = 464
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 151 ttcgtgccaagctgtgtgcaaccaag 176
||||||||||||||||||||||||||
Sbjct: 439 ttcgtgccaagctgtgtgcaaccaag 464
>39522_ppt-MIR536a:mirbase
Length = 199
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 151 ttcgtgccaagctgtgtgcaacc 173
|||||||||||||||||||||||
Sbjct: 163 ttcgtgccaagctgtgtgcaacc 185
>39527_ppt-MIR536f:mirbase
Length = 176
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 151 ttcgtgccaagctgtgtgca 170
||||||||||||||||||||
Sbjct: 127 ttcgtgccaagctgtgtgca 146
