miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39540_ppt-MIR898b:mirbase
Length = 220
Score = 436 bits (220), Expect = e-123
Identities = 220/220 (100%)
Strand = Plus / Plus
Query: 1 tactgcagaacttagttacagattcatctgctttgttcatttccggcatcttgctgtgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tactgcagaacttagttacagattcatctgctttgttcatttccggcatcttgctgtgca 60
Query: 61 ctacttagtacgcgcgtagttgcaggcattccgggtgcagcaactgacgcggaagacttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctacttagtacgcgcgtagttgcaggcattccgggtgcagcaactgacgcggaagacttt 120
Query: 121 tcccagagtgtgcgcttcaactggcgtgctgagtagtgcacagcaatatgctgggcatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcccagagtgtgcgcttcaactggcgtgctgagtagtgcacagcaatatgctgggcatgg 180
Query: 181 acagctaccaccgctgagttcgctgtatagaacgtttgct 220
||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acagctaccaccgctgagttcgctgtatagaacgtttgct 220
>39539_ppt-MIR898a:mirbase
Length = 220
Score = 54.0 bits (27), Expect = 5e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 40 tttccggcatcttgctgtgcactacttagtacgcgcgta 78
|||||||| | ||||||||||||||||||||| ||||||
Sbjct: 40 tttccggcgtattgctgtgcactacttagtacacgcgta 78
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 155 agtgcacagcaatatgctgggcatggacagctac 188
|||||||||| |||||||||| ||||||||||||
Sbjct: 154 agtgcacagcgatatgctgggtatggacagctac 187
