miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>39571_ppt-MIR904b:mirbase
          Length = 220

 Score =  436 bits (220), Expect = e-123
 Identities = 220/220 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctttggagcgatgtgtgtcatgatggcggtattttgtgatgctaatacggtcttgtcaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ctttggagcgatgtgtgtcatgatggcggtattttgtgatgctaatacggtcttgtcaat 60

                                                                       
Query: 61  gtttaggggcaaaggtgcaactatgcaacatccctggtgcgagctcttgatcgcgtaagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtttaggggcaaaggtgcaactatgcaacatccctggtgcgagctcttgatcgcgtaagt 120

                                                                       
Query: 121 gttgctagtgccctccacccctaaatgttggcaagacctaattggcgcacaacattggga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttgctagtgccctccacccctaaatgttggcaagacctaattggcgcacaacattggga 180

                                                   
Query: 181 ccgacgctggatcagcagaagtcaaaagacacaattgtga 220
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccgacgctggatcagcagaagtcaaaagacacaattgtga 220




>39570_ppt-MIR904a:mirbase
          Length = 220

 Score = 77.8 bits (39), Expect = 3e-15
 Identities = 42/43 (97%)
 Strand = Plus / Plus

                                                     
Query: 33 tttgtgatgctaatacggtcttgtcaatgtttaggggcaaagg 75
          ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 33 tttgtgatgctaatatggtcttgtcaatgtttaggggcaaagg 75