miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>39584_ppt-MIR1026a:mirbase
          Length = 171

 Score =  339 bits (171), Expect = 4e-94
 Identities = 171/171 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaagttcttgagacactctctaggtctgagaaagacttgagaggacactcctacaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgaaagttcttgagacactctctaggtctgagaaagacttgagaggacactcctacaat 60

                                                                       
Query: 61  agcctcgggaactgcatgacgtttttcattagatgaggtggttccctgagcatttgcagg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  agcctcgggaactgcatgacgtttttcattagatgaggtggttccctgagcatttgcagg 120

                                                              
Query: 121 acagttctttcaagccttcctcggactttggattgtttgttccatatcatg 171
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acagttctttcaagccttcctcggactttggattgtttgttccatatcatg 171




>39585_ppt-MIR1026b:mirbase
          Length = 152

 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 28 tctgagaaagacttgagaggacactcct 55
          ||||||||||||||||||||||||||||
Sbjct: 28 tctgagaaagacttgagaggacactcct 55