miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39694_ppt-MIR1219b:mirbase
Length = 78
Score = 155 bits (78), Expect = 5e-39
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 1 ctcttcctgcctctcactagcttcatcccttcgaacccgaaggtactaaggtaaggaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcttcctgcctctcactagcttcatcccttcgaacccgaaggtactaaggtaaggaact 60
Query: 61 attgggaagcaggaacag 78
||||||||||||||||||
Sbjct: 61 attgggaagcaggaacag 78
>39693_ppt-MIR1219a:mirbase
Length = 135
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 ctcttcctgcctctcactagcttcatcccttc 32
||||||||||||||||||||||||||||||||
Sbjct: 27 ctcttcctgcctctcactagcttcatcccttc 58
>39695_ppt-MIR1219c:mirbase
Length = 152
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 ctcttcctgcctctcactagcttcatccct 30
||||||||||||||||||||||||||||||
Sbjct: 4 ctcttcctgcctctcactagcttcatccct 33
>39696_ppt-MIR1219d:mirbase
Length = 136
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 4 ttcctgcctctcactagcttcatccct 30
||||||||||||||||||||| |||||
Sbjct: 30 ttcctgcctctcactagcttcttccct 56
