miRNEST 2.0, an integrative microRNA resource :: BLAST
>51562_pta-miR319:pmrd
Length = 206
Score = 270 bits (136), Expect = 4e-73
Identities = 182/197 (92%), Gaps = 4/197 (2%)
Strand = Plus / Minus
Query: 1 tggagctcccttcagtccaaccaaagcttgtgcggcggtggttcagctgctgattcatgc 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 203 tggagctcccttcagtccaaccaaagcttgtgcagcggtggttcagctgctgattcatgc 144
Query: 61 attcgactgccctgtccgtgactttccagcagcctg----aatcaatcaatctatctcca 116
|||| ||| |||||||||||||| |||||||||||| |||||||||||| | || ||
Sbjct: 143 attctacttccctgtccgtgactctccagcagcctgaacaaatcaatcaatcgacctgca 84
Query: 117 tgacaggatagtggtgtgcatgacgcaggagatgtattgtcactggacacgcattccttg 176
|||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||
Sbjct: 83 tgacaggatagtggtgtgcatgacgcaggagatgtactgtcactaaacacgcatttcttg 24
Query: 177 gattgaagggagctcca 193
|||||||||||||||||
Sbjct: 23 gattgaagggagctcca 7
>51553_pta-miR159a:pmrd
Length = 210
Score = 270 bits (136), Expect = 4e-73
Identities = 182/197 (92%), Gaps = 4/197 (2%)
Strand = Plus / Plus
Query: 1 tggagctcccttcagtccaaccaaagcttgtgcggcggtggttcagctgctgattcatgc 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 8 tggagctcccttcagtccaaccaaagcttgtgcagcggtggttcagctgctgattcatgc 67
Query: 61 attcgactgccctgtccgtgactttccagcagcctg----aatcaatcaatctatctcca 116
|||| ||| |||||||||||||| |||||||||||| |||||||||||| | || ||
Sbjct: 68 attctacttccctgtccgtgactctccagcagcctgaacaaatcaatcaatcgacctgca 127
Query: 117 tgacaggatagtggtgtgcatgacgcaggagatgtattgtcactggacacgcattccttg 176
|||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||
Sbjct: 128 tgacaggatagtggtgtgcatgacgcaggagatgtactgtcactaaacacgcatttcttg 187
Query: 177 gattgaagggagctcca 193
|||||||||||||||||
Sbjct: 188 gattgaagggagctcca 204
>51555_pta-miR159c:pmrd
Length = 85
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 170 ttccttggattgaagggagctcc 192
|||||||||||||||||||||||
Sbjct: 46 ttccttggattgaagggagctcc 68
>54573_smo-miR159:pmrd
Length = 279
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 172 ccttggattgaagggagctcc 192
|||||||||||||||||||||
Sbjct: 248 ccttggattgaagggagctcc 268
>48694_mma-miR159:pmrd
Length = 192
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 2 ggagctcccttcagtccaaccaaag 26
||||||||||||||||||| |||||
Sbjct: 179 ggagctcccttcagtccaatcaaag 155
>48479_fal-miR159:pmrd
Length = 192
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 2 ggagctcccttcagtccaaccaaag 26
||||||||||||||||||| |||||
Sbjct: 179 ggagctcccttcagtccaatcaaag 155
>48478_ech-miR159:pmrd
Length = 192
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 2 ggagctcccttcagtccaaccaaag 26
||||||||||||||||||| |||||
Sbjct: 179 ggagctcccttcagtccaatcaaag 155
>48476_dso-miR159:pmrd
Length = 192
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 2 ggagctcccttcagtccaaccaaag 26
||||||||||||||||||| |||||
Sbjct: 179 ggagctcccttcagtccaatcaaag 155
>48429_crb-miR159:pmrd
Length = 194
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 2 ggagctcccttcagtccaaccaaag 26
||||||||||||||||||| |||||
Sbjct: 181 ggagctcccttcagtccaatcaaag 157
>48422_cor-miR159:pmrd
Length = 193
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 2 ggagctcccttcagtccaaccaaag 26
||||||||||||||||||| |||||
Sbjct: 180 ggagctcccttcagtccaatcaaag 156
>48421_cmi-miR159:pmrd
Length = 193
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 2 ggagctcccttcagtccaaccaaag 26
||||||||||||||||||| |||||
Sbjct: 180 ggagctcccttcagtccaatcaaag 156
>47656_ath-miRf10556-akr:pmrd
Length = 203
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 ggagctcccttcagtccaaccaaag 26
||||||||||||||||||| |||||
Sbjct: 19 ggagctcccttcagtccaatcaaag 43
>46992_ath-miR319a:pmrd
Length = 176
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 2 ggagctcccttcagtccaaccaaag 26
||||||||||||||||||| |||||
Sbjct: 172 ggagctcccttcagtccaatcaaag 148
>46856_ahi-miR159:pmrd
Length = 192
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 2 ggagctcccttcagtccaaccaaag 26
||||||||||||||||||| |||||
Sbjct: 179 ggagctcccttcagtccaatcaaag 155
>46855_aha-miR159:pmrd
Length = 192
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 2 ggagctcccttcagtccaaccaaag 26
||||||||||||||||||| |||||
Sbjct: 179 ggagctcccttcagtccaatcaaag 155
>46846_acb-miR159:pmrd
Length = 191
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 2 ggagctcccttcagtccaaccaaag 26
||||||||||||||||||| |||||
Sbjct: 178 ggagctcccttcagtccaatcaaag 154
>55054_zma-miR319m:pmrd
Length = 178
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 cttggattgaagggagctcc 192
||||||||||||||||||||
Sbjct: 158 cttggattgaagggagctcc 177
>54936_zma-miR159g:pmrd
Length = 180
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 cttggattgaagggagctcc 192
||||||||||||||||||||
Sbjct: 159 cttggattgaagggagctcc 178
>54935_zma-miR159f:pmrd
Length = 181
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 cttggattgaagggagctcc 192
||||||||||||||||||||
Sbjct: 160 cttggattgaagggagctcc 179
>54933_zma-miR159d:pmrd
Length = 217
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 cttggattgaagggagctcc 192
||||||||||||||||||||
Sbjct: 178 cttggattgaagggagctcc 197
>54932_zma-miR159c:pmrd
Length = 217
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 cttggattgaagggagctcc 192
||||||||||||||||||||
Sbjct: 178 cttggattgaagggagctcc 197
>54643_sof-miR319b:pmrd
Length = 176
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 cttggattgaagggagctcc 192
||||||||||||||||||||
Sbjct: 156 cttggattgaagggagctcc 175
>54630_sof-miR159c:pmrd
Length = 238
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 cttggattgaagggagctcc 192
||||||||||||||||||||
Sbjct: 199 cttggattgaagggagctcc 218
>54403_sbi-miR159b:pmrd
Length = 253
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 cttggattgaagggagctcc 192
||||||||||||||||||||
Sbjct: 214 cttggattgaagggagctcc 233
>51605_ptc-miR159d:pmrd
Length = 194
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 cttggattgaagggagctcc 192
||||||||||||||||||||
Sbjct: 165 cttggattgaagggagctcc 184
>51384_ppt-miR319a:pmrd
Length = 169
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 tggagctcccttcagtccaa 20
||||||||||||||||||||
Sbjct: 168 tggagctcccttcagtccaa 149
>48821_osa-miR159c:pmrd
Length = 197
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 174 ttggattgaagggagctcca 193
||||||||||||||||||||
Sbjct: 168 ttggattgaagggagctcca 187
