miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39416_pta-MIR156b:mirbase
Length = 83
Score = 165 bits (83), Expect = 6e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 gatgacagaagatagagagcacaaccgctcagatgccggcactctgcgtttgaggtgtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatgacagaagatagagagcacaaccgctcagatgccggcactctgcgtttgaggtgtat 60
Query: 61 gtgctctcgttgattttgtcatc 83
|||||||||||||||||||||||
Sbjct: 61 gtgctctcgttgattttgtcatc 83
>39415_pta-MIR156a:mirbase
Length = 83
Score = 109 bits (55), Expect = 3e-25
Identities = 76/83 (91%)
Strand = Plus / Plus
Query: 1 gatgacagaagatagagagcacaaccgctcagatgccggcactctgcgtttgaggtgtat 60
||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||
Sbjct: 1 gatgacagaagatagagagcacatccgctcacatgccgggactctgcgtttgaggtgtat 60
Query: 61 gtgctctcgttgattttgtcatc 83
||| |||| ||||| |||||||
Sbjct: 61 gtggtctccatgattctgtcatc 83
>40427_gma-MIR156c:mirbase
Length = 185
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcacaacc 26
||||||||||||||||||||||||
Sbjct: 147 tgacagaagatagagagcacaacc 170
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcacaac 25
|||||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcacaac 34
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcacaac 25
|||||||||||||||||||||||
Sbjct: 22 tgacagaagatagagagcacaac 44
>40335_rco-MIR156f:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcacaac 25
|||||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcacaac 29
>42687_zma-MIR156j:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 gatgacagaagatagagagcacaacc 26
|||||||||||| |||||||||||||
Sbjct: 19 gatgacagaagagagagagcacaacc 44
>42488_sbi-MIR156d:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 gatgacagaagatagagagcacaacc 26
|||||||||||| |||||||||||||
Sbjct: 19 gatgacagaagagagagagcacaacc 44
>41914_osa-MIR156k:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 gatgacagaagatagagagcacaacc 26
|||||||||||| |||||||||||||
Sbjct: 9 gatgacagaagagagagagcacaacc 34
>40431_gma-MIR156g:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 3 tgacagaagatagagagcacaa 24
||||||||||||||||||||||
Sbjct: 106 tgacagaagatagagagcacaa 85
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcaca 23
|||||||||||||||||||||
Sbjct: 25 tgacagaagatagagagcaca 45
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcacaa 24
||||||||||||||||||||||
Sbjct: 24 tgacagaagatagagagcacaa 45
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcacaa 24
||||||||||||||||||||||
Sbjct: 24 tgacagaagatagagagcacaa 45
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcaca 23
|||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcaca 32
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcaca 23
|||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcaca 32
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcaca 23
|||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcaca 32
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcaca 23
|||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcaca 32
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcaca 23
|||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcaca 32
>41163_aqc-MIR156b:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcaca 23
|||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcaca 21
>41162_aqc-MIR156a:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcaca 23
|||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcaca 21
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcaca 23
|||||||||||||||||||||
Sbjct: 22 tgacagaagatagagagcaca 42
>41077_gra-MIR157b:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcaca 23
|||||||||||||||||||||
Sbjct: 6 tgacagaagatagagagcaca 26
>41076_gra-MIR157a:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcaca 23
|||||||||||||||||||||
Sbjct: 6 tgacagaagatagagagcaca 26
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcaca 23
|||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcaca 27
>40653_mtr-MIR156f:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcaca 23
|||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcaca 27
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcaca 23
|||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcaca 27
>40428_gma-MIR156d:mirbase
Length = 151
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcaca 23
|||||||||||||||||||||
Sbjct: 22 tgacagaagatagagagcaca 42
>40337_rco-MIR156h:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcaca 23
|||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcaca 27
>40011_ath-MIR157b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcaca 23
|||||||||||||||||||||
Sbjct: 20 tgacagaagatagagagcaca 40
>40010_ath-MIR157a:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcaca 23
|||||||||||||||||||||
Sbjct: 5 tgacagaagatagagagcaca 25
>39799_aly-MIR157b:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcaca 23
|||||||||||||||||||||
Sbjct: 5 tgacagaagatagagagcaca 25
>39798_aly-MIR157a:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcaca 23
|||||||||||||||||||||
Sbjct: 17 tgacagaagatagagagcaca 37
>39727_smo-MIR156b:mirbase
Length = 112
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcaca 23
|||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcaca 32
>41527_sly-MIR156c:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcac 22
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>41526_sly-MIR156b:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcac 22
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>41525_sly-MIR156a:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcac 22
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>41295_ptc-MIR156h:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcac 22
||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcac 31
>41204_aqc-MIR529:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcacaacc 26
|||||||||| |||||||||||||
Sbjct: 18 tgacagaagagagagagcacaacc 41
>41080_tcc-MIR156a:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcacaacc 26
|||||||||| |||||||||||||
Sbjct: 21 tgacagaagagagagagcacaacc 44
>40430_gma-MIR156f:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcacaacc 26
|||||||||| |||||||||||||
Sbjct: 12 tgacagaagagagagagcacaacc 35
>40429_gma-MIR156e:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcac 22
||||||||||||||||||||
Sbjct: 22 tgacagaagatagagagcac 41
>40426_gma-MIR156b:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcacaacc 26
|||||||||| |||||||||||||
Sbjct: 21 tgacagaagagagagagcacaacc 44
>40396_ahy-MIR156c:mirbase
Length = 139
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcacaacc 26
|||||||||| |||||||||||||
Sbjct: 22 tgacagaagagagagagcacaacc 45
>40393_ahy-MIR156a:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcacaacc 26
|||||||||| |||||||||||||
Sbjct: 18 tgacagaagagagagagcacaacc 41
>40336_rco-MIR156g:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcac 22
||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcac 26
>40334_rco-MIR156e:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcacaacc 26
|||||||||| |||||||||||||
Sbjct: 6 tgacagaagagagagagcacaacc 29
>40310_bra-MIR157a:mirbase
Length = 149
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcac 22
||||||||||||||||||||
Sbjct: 15 tgacagaagatagagagcac 34
>40304_bol-MIR157a:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcac 22
||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcac 26
>40260_bna-MIR156c:mirbase
Length = 155
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcac 22
||||||||||||||||||||
Sbjct: 19 tgacagaagatagagagcac 38
>40259_bna-MIR156b:mirbase
Length = 208
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcac 22
||||||||||||||||||||
Sbjct: 26 tgacagaagatagagagcac 45
>40013_ath-MIR157d:mirbase
Length = 221
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcac 22
||||||||||||||||||||
Sbjct: 24 tgacagaagatagagagcac 43
>40012_ath-MIR157c:mirbase
Length = 217
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcac 22
||||||||||||||||||||
Sbjct: 25 tgacagaagatagagagcac 44
>40009_ath-MIR156h:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcacaacc 26
|||||||||| |||||||||||||
Sbjct: 12 tgacagaagaaagagagcacaacc 35
>39801_aly-MIR157d:mirbase
Length = 256
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcac 22
||||||||||||||||||||
Sbjct: 38 tgacagaagatagagagcac 57
>39800_aly-MIR157c:mirbase
Length = 293
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcac 22
||||||||||||||||||||
Sbjct: 56 tgacagaagatagagagcac 75
>39797_aly-MIR156h:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 tgacagaagatagagagcacaacc 26
|||||||||| |||||||||||||
Sbjct: 8 tgacagaagaaagagagcacaacc 31
>40648_mtr-MIR156:mirbase
Length = 460
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gatgacagaagatagagagcaca 23
|||||||||||| ||||||||||
Sbjct: 19 gatgacagaagagagagagcaca 41
