miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39432_pta-MIR482d:mirbase
Length = 92
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 gaggtgtggaaggatagggtaagactaaggttaaggagaaactctgcttcattaattctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggtgtggaaggatagggtaagactaaggttaaggagaaactctgcttcattaattctc 60
Query: 61 tgctccagtcctccctactcctcccattcctt 92
||||||||||||||||||||||||||||||||
Sbjct: 61 tgctccagtcctccctactcctcccattcctt 92
>39429_pta-MIR482a:mirbase
Length = 92
Score = 174 bits (88), Expect = 7e-45
Identities = 91/92 (98%)
Strand = Plus / Plus
Query: 1 gaggtgtggaaggatagggtaagactaaggttaaggagaaactctgcttcattaattctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggtgtggaaggatagggtaagactaaggttaaggagaaactctgcttcattaattctc 60
Query: 61 tgctccagtcctccctactcctcccattcctt 92
|||||||||| |||||||||||||||||||||
Sbjct: 61 tgctccagtcttccctactcctcccattcctt 92
>39430_pta-MIR482b:mirbase
Length = 92
Score = 159 bits (80), Expect = 4e-40
Identities = 89/92 (96%)
Strand = Plus / Plus
Query: 1 gaggtgtggaaggatagggtaagactaaggttaaggagaaactctgcttcattaattctc 60
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 1 gaggtgtggaaggatagggtaagactagggttaagcagaaactctgcttcattaattctc 60
Query: 61 tgctccagtcctccctactcctcccattcctt 92
|||||||||| |||||||||||||||||||||
Sbjct: 61 tgctccagtcttccctactcctcccattcctt 92
>39383_pab-MIR482a:mirbase
Length = 118
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 gaggtgtggaaggatagggtaagactaaggttaag 35
|||| ||||||||||||||||||||| |||||||
Sbjct: 4 gaggagtggaaggatagggtaagactgcggttaag 38
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 65 ccagtcctccctactcctcccattcct 91
|||||| ||||||||||||||||||||
Sbjct: 74 ccagtcttccctactcctcccattcct 100
