miRNEST 2.0, an integrative microRNA resource :: BLAST
>52400_ptc-miRf10578-akr:pmrd
Length = 103
Score = 204 bits (103), Expect = 9e-54
Identities = 103/103 (100%)
Strand = Plus / Minus
Query: 3 ggaagacactggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 ggaagacactggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacg 44
Query: 63 aaaaacatgaaccgatcgataaacctctgcatccagcgcttcc 105
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 aaaaacatgaaccgatcgataaacctctgcatccagcgcttcc 1
>52399_ptc-miRf10577-akr:pmrd
Length = 103
Score = 204 bits (103), Expect = 9e-54
Identities = 103/103 (100%)
Strand = Plus / Minus
Query: 3 ggaagacactggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 ggaagacactggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacg 44
Query: 63 aaaaacatgaaccgatcgataaacctctgcatccagcgcttcc 105
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 aaaaacatgaaccgatcgataaacctctgcatccagcgcttcc 1
>52497_ptc-miRf10675-akr:pmrd
Length = 105
Score = 123 bits (62), Expect = 3e-29
Identities = 92/102 (90%)
Strand = Plus / Minus
Query: 4 gaagacactggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacga 63
||||||||||||||||||||||||||||||| |||||| | |||||||||| |||||
Sbjct: 103 gaagacactggaggcagcggttcatcgatcttttcctgaagatttttttgttttacacga 44
Query: 64 aaaacatgaaccgatcgataaacctctgcatccagcgcttcc 105
| |||| |||||||||||||||||||||||||||| ||||||
Sbjct: 43 acaacacgaaccgatcgataaacctctgcatccagtgcttcc 2
>52244_ptc-miRf10422-akr:pmrd
Length = 105
Score = 123 bits (62), Expect = 3e-29
Identities = 92/102 (90%)
Strand = Plus / Minus
Query: 4 gaagacactggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacga 63
||||||||||||||||||||||||||||||| |||||| | |||||||||| |||||
Sbjct: 103 gaagacactggaggcagcggttcatcgatcttttcctgaagatttttttgttttacacga 44
Query: 64 aaaacatgaaccgatcgataaacctctgcatccagcgcttcc 105
| |||| |||||||||||||||||||||||||||| ||||||
Sbjct: 43 acaacacgaaccgatcgataaacctctgcatccagtgcttcc 2
>51618_ptc-miR162c:pmrd
Length = 107
Score = 123 bits (62), Expect = 3e-29
Identities = 92/102 (90%)
Strand = Plus / Plus
Query: 4 gaagacactggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacga 63
||||||||||||||||||||||||||||||| |||||| | |||||||||| |||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcctgaagatttttttgttttacacga 63
Query: 64 aaaacatgaaccgatcgataaacctctgcatccagcgcttcc 105
| |||| |||||||||||||||||||||||||||| ||||||
Sbjct: 64 acaacacgaaccgatcgataaacctctgcatccagtgcttcc 105
>51617_ptc-miR162b:pmrd
Length = 107
Score = 123 bits (62), Expect = 3e-29
Identities = 92/102 (90%)
Strand = Plus / Plus
Query: 4 gaagacactggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacga 63
||||||||||||||||||||||||||||||| |||||| | |||||||||| |||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcctgaagatttttttgttttacacga 63
Query: 64 aaaacatgaaccgatcgataaacctctgcatccagcgcttcc 105
| |||| |||||||||||||||||||||||||||| ||||||
Sbjct: 64 acaacacgaaccgatcgataaacctctgcatccagtgcttcc 105
>52498_ptc-miRf10676-akr:pmrd
Length = 101
Score = 121 bits (61), Expect = 1e-28
Identities = 91/101 (90%)
Strand = Plus / Minus
Query: 4 gaagacactggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacga 63
||||||||||||||||||||||||||||||| |||||| | |||||||||| |||||
Sbjct: 101 gaagacactggaggcagcggttcatcgatcttttcctgaagatttttttgttttacacga 42
Query: 64 aaaacatgaaccgatcgataaacctctgcatccagcgcttc 104
| |||| |||||||||||||||||||||||||||| |||||
Sbjct: 41 acaacacgaaccgatcgataaacctctgcatccagtgcttc 1
>52243_ptc-miRf10421-akr:pmrd
Length = 101
Score = 121 bits (61), Expect = 1e-28
Identities = 91/101 (90%)
Strand = Plus / Minus
Query: 4 gaagacactggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacga 63
||||||||||||||||||||||||||||||| |||||| | |||||||||| |||||
Sbjct: 101 gaagacactggaggcagcggttcatcgatcttttcctgaagatttttttgttttacacga 42
Query: 64 aaaacatgaaccgatcgataaacctctgcatccagcgcttc 104
| |||| |||||||||||||||||||||||||||| |||||
Sbjct: 41 acaacacgaaccgatcgataaacctctgcatccagtgcttc 1
>48493_ghr-miR162a:pmrd
Length = 148
Score = 79.8 bits (40), Expect = 4e-16
Identities = 87/101 (86%), Gaps = 5/101 (4%)
Strand = Plus / Plus
Query: 5 aagacactggaggcagcggttcatcgatctcttcctggccaattttttgt----ttagca 60
||||||||||||||||||||||||||||||||||||| | ||| |||| || ||
Sbjct: 18 aagacactggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataaca 77
Query: 61 cgaaaaacatgaaccgatcgataaacctctgcatccagcgc 101
| ||| ||||||| |||||||||||||||||||||||||||
Sbjct: 78 c-aaatacatgaatcgatcgataaacctctgcatccagcgc 117
>48545_gma-miR162a:pmrd
Length = 102
Score = 75.8 bits (38), Expect = 6e-15
Identities = 84/99 (84%), Gaps = 4/99 (4%)
Strand = Plus / Plus
Query: 4 gaagacactggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacga 63
|||| ||||||| ||||||||||||||||||||||||| | | ||||||| || |
Sbjct: 3 gaagtcactggatgcagcggttcatcgatctcttcctg----aatcgttgtttaacatca 58
Query: 64 aaaacatgaaccgatcgataaacctctgcatccagcgct 102
|| |||||| ||||||||||||||||||||||||||||
Sbjct: 59 gaaccatgaatcgatcgataaacctctgcatccagcgct 97
>54387_rco-miR162:pmrd
Length = 96
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 9 cactggaggcagcggttcatcgatctcttcctgg 42
||||||||||||||||||||||||||||||||||
Sbjct: 1 cactggaggcagcggttcatcgatctcttcctgg 34
>48423_cpa-miR162a:pmrd
Length = 109
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 9 cactggaggcagcggttcatcgatctcttcctgg 42
||||||||||||||||||||||||||||||||||
Sbjct: 11 cactggaggcagcggttcatcgatctcttcctgg 44
>46937_ath-miR162a:pmrd
Length = 140
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctg 41
|||||||||||||||||||||||||||||||
Sbjct: 25 ctggaggcagcggttcatcgatctcttcctg 55
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 63 aaaaacatgaaccgatcgataaacctctgcatccagcg 100
|||| |||||| |||||||||||||||||||||||||
Sbjct: 74 aaaagcatgaatagatcgataaacctctgcatccagcg 111
>54784_vvi-miR162:pmrd
Length = 103
Score = 60.0 bits (30), Expect = 3e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 4 gaagacactggaggcagcggttcatcgatctcttcctg 41
|||| ||||||| |||||||||||||||||||||||||
Sbjct: 2 gaagtcactggatgcagcggttcatcgatctcttcctg 39
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 tcgataaacctctgcatccagcg 100
|||||||||||||||||||||||
Sbjct: 73 tcgataaacctctgcatccagcg 95
>47354_ath-miRf10254-akr:pmrd
Length = 115
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 75 cgatcgataaacctctgcatccagcgct 102
||||||||||||||||||||||||||||
Sbjct: 38 cgatcgataaacctctgcatccagcgct 11
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 102 ctggaggcagcggttcatcgatc 80
>46938_ath-miR162b:pmrd
Length = 111
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 75 cgatcgataaacctctgcatccagcgct 102
||||||||||||||||||||||||||||
Sbjct: 76 cgatcgataaacctctgcatccagcgct 103
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 12 ctggaggcagcggttcatcgatc 34
>48682_llu-miR162:pmrd
Length = 80
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 68 catgaaccgatcgataaacctctgcatccag 98
|||||| ||||||||||||||||||||||||
Sbjct: 50 catgaatcgatcgataaacctctgcatccag 80
>48707_mtr-miR162d:pmrd
Length = 87
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 65 aaacatgaaccgatcgataaacctctgcatccag 98
||||||||| || |||||||||||||||||||||
Sbjct: 54 aaacatgaatcggtcgataaacctctgcatccag 87
>48706_mtr-miR162c:pmrd
Length = 86
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 65 aaacatgaaccgatcgataaacctctgcatcca 97
||||||||| || ||||||||||||||||||||
Sbjct: 33 aaacatgaatcggtcgataaacctctgcatcca 1
>48705_mtr-miR162b:pmrd
Length = 85
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 65 aaacatgaaccgatcgataaacctctgcatcca 97
||||||||| || ||||||||||||||||||||
Sbjct: 53 aaacatgaatcggtcgataaacctctgcatcca 85
>48685_lsa-miR162:pmrd
Length = 89
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 78 tcgataaacctctgcatccagcgct 102
|||||||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccagcgct 25
>48546_gma-miR162m:pmrd
Length = 367
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 78 tcgataaacctctgcatccagcgct 102
|||||||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccagcgct 25
>48834_osa-miR162a:pmrd
Length = 171
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 cgatcgataaacctctgcatccag 98
||||||||||||||||||||||||
Sbjct: 140 cgatcgataaacctctgcatccag 163
>54948_zma-miR162b:pmrd
Length = 130
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tcgataaacctctgcatccag 98
|||||||||||||||||||||
Sbjct: 110 tcgataaacctctgcatccag 130
>54542_sly-miR162:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tcgataaacctctgcatccag 98
|||||||||||||||||||||
Sbjct: 79 tcgataaacctctgcatccag 99
>48836_osa-miR162m:pmrd
Length = 114
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 75 cgatcgataaacctctgcatccag 98
|||||||||| |||||||||||||
Sbjct: 91 cgatcgataagcctctgcatccag 114
>48835_osa-miR162b:pmrd
Length = 134
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 75 cgatcgataaacctctgcatccag 98
|||||||||| |||||||||||||
Sbjct: 101 cgatcgataagcctctgcatccag 124
>48690_mdo-miR162:pmrd
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatct 34
||||||||| ||||||||||||||
Sbjct: 1 ctggaggcatcggttcatcgatct 24
