miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41318_ptc-MIR164c:mirbase
Length = 82
Score = 163 bits (82), Expect = 2e-41
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 1 tagctcttgctggagaagcagggcacgtgcaagctctctcctcaagctttccttgcacgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagctcttgctggagaagcagggcacgtgcaagctctctcctcaagctttccttgcacgt 60
Query: 61 gctccccttctccaacatgggt 82
||||||||||||||||||||||
Sbjct: 61 gctccccttctccaacatgggt 82
>41579_vvi-MIR164a:mirbase
Length = 121
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 52 cttgcacgtgctccccttctccaacatgggt 82
|||||||||||||||||||||||||||||||
Sbjct: 87 cttgcacgtgctccccttctccaacatgggt 117
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 cttgctggagaagcagggcacgtgca 31
|||| |||||||||||||||||||||
Sbjct: 6 cttgttggagaagcagggcacgtgca 31
>41582_vvi-MIR164d:mirbase
Length = 118
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 54 tgcacgtgctccccttctccaacatgggt 82
|||||||||||||||||||||||||||||
Sbjct: 86 tgcacgtgctccccttctccaacatgggt 114
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 2 agctcttgctggagaagcagggcacgtgca 31
|||||||| |||||||||||||||||||||
Sbjct: 2 agctcttgatggagaagcagggcacgtgca 31
>41092_tcc-MIR164b:mirbase
Length = 130
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 tagctcttgctggagaagcagggcacgtgcaag 33
||||||||| |||||||||||||||||||||||
Sbjct: 11 tagctcttgttggagaagcagggcacgtgcaag 43
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 54 tgcacgtgctccccttctccaacatg 79
||||||||||||||||||||| ||||
Sbjct: 90 tgcacgtgctccccttctccaccatg 115
>40344_rco-MIR164b:mirbase
Length = 104
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 53 ttgcacgtgctccccttctccaacatgg 80
||||||||||||||||||||||||||||
Sbjct: 76 ttgcacgtgctccccttctccaacatgg 103
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 tgctggagaagcagggcacgtgcaa 32
|||||||||||||||||||||||||
Sbjct: 3 tgctggagaagcagggcacgtgcaa 27
>41316_ptc-MIR164a:mirbase
Length = 85
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cttgctggagaagcagggcacgtgcaa 32
|||||||||||||||||||||||||||
Sbjct: 6 cttgctggagaagcagggcacgtgcaa 32
>40343_rco-MIR164a:mirbase
Length = 78
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 cttgctggagaagcagggcacgtgcaa 32
|||||||||||||||||||||||||||
Sbjct: 1 cttgctggagaagcagggcacgtgcaa 27
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 53 ttgcacgtgctccccttctccaacatggg 81
||||||||||||| |||||||||||||||
Sbjct: 50 ttgcacgtgctccacttctccaacatggg 78
>41047_ghr-MIR164:mirbase
Length = 101
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 4 ctcttgctggagaagcagggcacgtgcaag 33
|||||| |||||||||||||||||||||||
Sbjct: 12 ctcttgttggagaagcagggcacgtgcaag 41
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 53 ttgcacgtgctccccttctcca 74
||||||||||||||||||||||
Sbjct: 62 ttgcacgtgctccccttctcca 83
>40438_gma-MIR164:mirbase
Length = 95
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 53 ttgcacgtgctccccttctccaacatgggt 82
||||||||||||||||||||||||| ||||
Sbjct: 64 ttgcacgtgctccccttctccaacacgggt 93
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 6 cttgctggagaagcagggcacgtgcaag 33
|||| |||||||||||||||||||||||
Sbjct: 6 cttgttggagaagcagggcacgtgcaag 33
>41739_bdi-MIR164c:mirbase
Length = 138
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 cttgctggagaagcagggcacgtgc 30
|||||||||||||||||||||||||
Sbjct: 29 cttgctggagaagcagggcacgtgc 53
>41091_tcc-MIR164a:mirbase
Length = 128
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 54 tgcacgtgctccccttctccaacatgggt 82
|||||||||||||||||||||||| ||||
Sbjct: 88 tgcacgtgctccccttctccaacacgggt 116
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 cttgctggagaagcagggcacgtgcaa 32
|||| ||||||||||||||||||||||
Sbjct: 16 cttgttggagaagcagggcacgtgcaa 42
>41319_ptc-MIR164d:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 gctggagaagcagggcacgtgcaa 32
||||||||||||||||||||||||
Sbjct: 9 gctggagaagcagggcacgtgcaa 32
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 53 ttgcacgtgctccccttctccaacatg 79
|||||||||||||||| ||||||||||
Sbjct: 70 ttgcacgtgctcccctcctccaacatg 96
>40664_mtr-MIR164a:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 ttgcacgtgctccccttctccaac 76
||||||||||||||||||||||||
Sbjct: 72 ttgcacgtgctccccttctccaac 95
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 cttgctggagaagcagggcacgtgcaa 32
|||| ||||||||||||||||||||||
Sbjct: 1 cttgttggagaagcagggcacgtgcaa 27
>42712_zma-MIR164d:mirbase
Length = 216
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 gctggagaagcagggcacgtgca 31
|||||||||||||||||||||||
Sbjct: 18 gctggagaagcagggcacgtgca 40
>42709_zma-MIR164a:mirbase
Length = 152
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 gctggagaagcagggcacgtgca 31
|||||||||||||||||||||||
Sbjct: 17 gctggagaagcagggcacgtgca 39
>42504_sbi-MIR164b:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 tgctggagaagcagggcacgtgc 30
|||||||||||||||||||||||
Sbjct: 18 tgctggagaagcagggcacgtgc 40
>41934_osa-MIR164d:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 tgctggagaagcagggcacgtgc 30
|||||||||||||||||||||||
Sbjct: 8 tgctggagaagcagggcacgtgc 30
>41933_osa-MIR164c:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 54 tgcacgtgctccccttctccaacatgg 80
||||||||||||||||||||| |||||
Sbjct: 89 tgcacgtgctccccttctccaccatgg 115
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 5 tcttgctggagaagcagggcacgtgcaa 32
||||| ||||||||||||| ||||||||
Sbjct: 5 tcttgttggagaagcagggtacgtgcaa 32
>40666_mtr-MIR164c:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 cttgctggagaagcagggcacgtgcaa 32
|||| ||||||||||||||||||||||
Sbjct: 1 cttgttggagaagcagggcacgtgcaa 27
>42506_sbi-MIR164d:mirbase
Length = 160
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgcaagctc 36
||||||||||||||||||||| ||||
Sbjct: 1 tggagaagcagggcacgtgcatgctc 26
>41741_bdi-MIR164e:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgcaa 32
||||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgcaa 40
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 54 tgcacgtgctccccttctccaacatgg 80
|||||| |||||||||||||| |||||
Sbjct: 90 tgcacgcgctccccttctccaccatgg 116
>40665_mtr-MIR164b:mirbase
Length = 144
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgcaa 32
||||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgcaa 27
>40313_bra-MIR164a:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgcaa 32
||||||||||||||||||||||
Sbjct: 10 tggagaagcagggcacgtgcaa 31
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 53 ttgcacgtgctccccttctccaacatg 79
||||||||||||| || ||||||||||
Sbjct: 63 ttgcacgtgctccactcctccaacatg 89
>40263_bna-MIR164:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgcaa 32
||||||||||||||||||||||
Sbjct: 7 tggagaagcagggcacgtgcaa 28
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 53 ttgcacgtgctccccttctccaacatg 79
||||||||||||| || ||||||||||
Sbjct: 60 ttgcacgtgctccactcctccaacatg 86
>40027_ath-MIR164a:mirbase
Length = 113
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgcaa 32
||||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgcaa 40
>39816_aly-MIR164a:mirbase
Length = 79
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgcaa 32
||||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgcaa 24
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 53 ttgcacgtgctccccttctccaac 76
|||||||| |||||||||||||||
Sbjct: 56 ttgcacgtactccccttctccaac 79
>42715_zma-MIR164g:mirbase
Length = 171
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 2 tggagaagcagggcacgtgca 22
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tgcacgtgctccccttctcca 74
|||||||||||||||||||||
Sbjct: 148 tgcacgtgctccccttctcca 168
>42714_zma-MIR164f:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 ctggagaagcagggcacgtgc 30
|||||||||||||||||||||
Sbjct: 1 ctggagaagcagggcacgtgc 21
>42711_zma-MIR164c:mirbase
Length = 270
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 18 tggagaagcagggcacgtgca 38
>42710_zma-MIR164b:mirbase
Length = 128
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgca 41
>42637_tae-MIR164:mirbase
Length = 156
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgca 23
>42507_sbi-MIR164e:mirbase
Length = 205
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgca 23
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tgcacgtgctccccttctcca 74
|||||||||||||||||||||
Sbjct: 181 tgcacgtgctccccttctcca 201
>42503_sbi-MIR164:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgca 21
>41936_osa-MIR164f:mirbase
Length = 210
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 24 tggagaagcagggcacgtgca 44
>41932_osa-MIR164b:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 9 tggagaagcagggcacgtgca 29
>41931_osa-MIR164a:mirbase
Length = 156
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 17 tggagaagcagggcacgtgca 37
>41742_bdi-MIR164f:mirbase
Length = 161
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 144 tggagaagcagggcacgtgca 124
>41740_bdi-MIR164d:mirbase
Length = 186
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 18 tggagaagcagggcacgtgca 38
>41738_bdi-MIR164b:mirbase
Length = 209
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 33 tggagaagcagggcacgtgca 53
>41737_bdi-MIR164a:mirbase
Length = 193
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 31 tggagaagcagggcacgtgca 51
>41581_vvi-MIR164c:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>41320_ptc-MIR164e:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>41317_ptc-MIR164b:mirbase
Length = 162
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>41278_ctr-MIR164:mirbase
Length = 297
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 22 tggagaagcagggcacgtgca 42
>41221_csi-MIR164:mirbase
Length = 278
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 14 tggagaagcagggcacgtgca 34
>40345_rco-MIR164c:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgca 26
>40029_ath-MIR164c:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 cttgctggagaagcagggcacgtgc 30
|||| ||||||||||||||||||||
Sbjct: 6 cttgatggagaagcagggcacgtgc 30
>40028_ath-MIR164b:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgca 23
>39818_aly-MIR164c:mirbase
Length = 115
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 cttgctggagaagcagggcacgtgc 30
|||| ||||||||||||||||||||
Sbjct: 13 cttgatggagaagcagggcacgtgc 37
>39817_aly-MIR164b:mirbase
Length = 161
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgca 23
>42716_zma-MIR164h:mirbase
Length = 219
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtg 29
|||||||||||||||||||
Sbjct: 2 tggagaagcagggcacgtg 20
>41935_osa-MIR164e:mirbase
Length = 132
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtg 29
|||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtg 29
>41580_vvi-MIR164b:mirbase
Length = 93
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 8 tgctggagaagcagggcac 26
|||||||||||||||||||
Sbjct: 8 tgctggagaagcagggcac 26
>41321_ptc-MIR164f:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 8 tgctggagaagcagggcac 26
|||||||||||||||||||
Sbjct: 8 tgctggagaagcagggcac 26
>41093_tcc-MIR164c:mirbase
Length = 112
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 8 tgctggagaagcagggcac 26
|||||||||||||||||||
Sbjct: 18 tgctggagaagcagggcac 36
>40346_rco-MIR164d:mirbase
Length = 85
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 8 tgctggagaagcagggcac 26
|||||||||||||||||||
Sbjct: 3 tgctggagaagcagggcac 21
