miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41319_ptc-MIR164d:mirbase
Length = 99
Score = 196 bits (99), Expect = 2e-51
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 1 tggctcacgctggagaagcagggcacgtgcaaaatccttctcggcttccagatgctgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggctcacgctggagaagcagggcacgtgcaaaatccttctcggcttccagatgctgatg 60
Query: 61 aagcactctttgcacgtgctcccctcctccaacatgagt 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagcactctttgcacgtgctcccctcctccaacatgagt 99
>41316_ptc-MIR164a:mirbase
Length = 85
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 9 gctggagaagcagggcacgtgcaaaatcct 38
||||||||||||||||||||||||||||||
Sbjct: 9 gctggagaagcagggcacgtgcaaaatcct 38
>42712_zma-MIR164d:mirbase
Length = 216
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 6 cacgctggagaagcagggcacgtgca 31
||||||||||||||||||||||||||
Sbjct: 15 cacgctggagaagcagggcacgtgca 40
>42709_zma-MIR164a:mirbase
Length = 152
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 6 cacgctggagaagcagggcacgtgca 31
||||||||||||||||||||||||||
Sbjct: 14 cacgctggagaagcagggcacgtgca 39
>40313_bra-MIR164a:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 69 tttgcacgtgctcccctcctccaacatgag 98
|||||||||||||| |||||||||||||||
Sbjct: 62 tttgcacgtgctccactcctccaacatgag 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 6 cacgctggagaagcagggcacgtgcaaa 33
|||| |||||||||||||||||||||||
Sbjct: 5 cacgttggagaagcagggcacgtgcaaa 32
>41091_tcc-MIR164a:mirbase
Length = 128
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgcaaaat 35
|||||||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgcaaaat 45
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 71 tgcacgtgctcccctcctccaaca 94
||||||||||||||| ||||||||
Sbjct: 88 tgcacgtgctccccttctccaaca 111
>40344_rco-MIR164b:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 gctggagaagcagggcacgtgcaaa 33
|||||||||||||||||||||||||
Sbjct: 4 gctggagaagcagggcacgtgcaaa 28
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 69 tttgcacgtgctcccctcctccaacatg 96
||||||||||||||||| ||||||||||
Sbjct: 75 tttgcacgtgctccccttctccaacatg 102
>41318_ptc-MIR164c:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 gctggagaagcagggcacgtgcaa 32
||||||||||||||||||||||||
Sbjct: 9 gctggagaagcagggcacgtgcaa 32
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 70 ttgcacgtgctcccctcctccaacatg 96
|||||||||||||||| ||||||||||
Sbjct: 53 ttgcacgtgctccccttctccaacatg 79
>40343_rco-MIR164a:mirbase
Length = 78
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 gctggagaagcagggcacgtgcaa 32
||||||||||||||||||||||||
Sbjct: 4 gctggagaagcagggcacgtgcaa 27
>40263_bna-MIR164:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 6 cacgctggagaagcagggcacgtgcaaa 33
|||| |||||||||||||||||||||||
Sbjct: 2 cacgttggagaagcagggcacgtgcaaa 29
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 69 tttgcacgtgctcccctcctccaacatg 96
|||||||||||||| |||||||||||||
Sbjct: 59 tttgcacgtgctccactcctccaacatg 86
>41741_bdi-MIR164e:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgcaaa 33
|||||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgcaaa 41
>41579_vvi-MIR164a:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 70 ttgcacgtgctcccctcctccaacatg 96
|||||||||||||||| ||||||||||
Sbjct: 88 ttgcacgtgctccccttctccaacatg 114
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>40664_mtr-MIR164a:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgcaaa 33
|||||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgcaaa 28
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 69 tttgcacgtgctcccctcctccaac 93
||||||||||||||||| |||||||
Sbjct: 71 tttgcacgtgctccccttctccaac 95
>40438_gma-MIR164:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 68 ctttgcacgtgctcccctcctccaaca 94
|||||||||||||||||| ||||||||
Sbjct: 62 ctttgcacgtgctccccttctccaaca 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgcaa 32
||||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgcaa 32
>40027_ath-MIR164a:mirbase
Length = 113
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgcaaa 33
|||||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgcaaa 41
>39816_aly-MIR164a:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgcaaa 33
|||||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgcaaa 25
>42504_sbi-MIR164b:mirbase
Length = 111
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 gctggagaagcagggcacgtgc 30
||||||||||||||||||||||
Sbjct: 19 gctggagaagcagggcacgtgc 40
>41934_osa-MIR164d:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 gctggagaagcagggcacgtgc 30
||||||||||||||||||||||
Sbjct: 9 gctggagaagcagggcacgtgc 30
>41932_osa-MIR164b:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 cacgctggagaagcagggcacgtgca 31
|||| |||||||||||||||||||||
Sbjct: 4 cacggtggagaagcagggcacgtgca 29
>41739_bdi-MIR164c:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 gctggagaagcagggcacgtgc 30
||||||||||||||||||||||
Sbjct: 32 gctggagaagcagggcacgtgc 53
>41582_vvi-MIR164d:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 71 tgcacgtgctcccctcctccaacatg 96
||||||||||||||| ||||||||||
Sbjct: 86 tgcacgtgctccccttctccaacatg 111
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>41092_tcc-MIR164b:mirbase
Length = 130
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgcaa 32
||||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgcaa 42
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 71 tgcacgtgctcccctcctccaacatgagt 99
||||||||||||||| ||||| |||||||
Sbjct: 90 tgcacgtgctccccttctccaccatgagt 118
>41047_ghr-MIR164:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgcaa 32
||||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgcaa 40
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 68 ctttgcacgtgctcccctcctcca 91
|||||||||||||||||| |||||
Sbjct: 60 ctttgcacgtgctccccttctcca 83
>40666_mtr-MIR164c:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgcaa 32
||||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgcaa 27
>40665_mtr-MIR164b:mirbase
Length = 144
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgcaa 32
||||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgcaa 27
>42715_zma-MIR164g:mirbase
Length = 171
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 2 tggagaagcagggcacgtgca 22
>42714_zma-MIR164f:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 ctggagaagcagggcacgtgc 30
|||||||||||||||||||||
Sbjct: 1 ctggagaagcagggcacgtgc 21
>42711_zma-MIR164c:mirbase
Length = 270
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 18 tggagaagcagggcacgtgca 38
>42710_zma-MIR164b:mirbase
Length = 128
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgca 41
>42637_tae-MIR164:mirbase
Length = 156
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgca 23
>42507_sbi-MIR164e:mirbase
Length = 205
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgca 23
>42506_sbi-MIR164d:mirbase
Length = 160
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgca 21
>42503_sbi-MIR164:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgca 21
>41936_osa-MIR164f:mirbase
Length = 210
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 24 tggagaagcagggcacgtgca 44
>41933_osa-MIR164c:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgcaaaat 35
||||||||||||| |||||||||||
Sbjct: 11 tggagaagcagggtacgtgcaaaat 35
>41931_osa-MIR164a:mirbase
Length = 156
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 17 tggagaagcagggcacgtgca 37
>41742_bdi-MIR164f:mirbase
Length = 161
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 144 tggagaagcagggcacgtgca 124
>41740_bdi-MIR164d:mirbase
Length = 186
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 18 tggagaagcagggcacgtgca 38
>41738_bdi-MIR164b:mirbase
Length = 209
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 33 tggagaagcagggcacgtgca 53
>41737_bdi-MIR164a:mirbase
Length = 193
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 31 tggagaagcagggcacgtgca 51
>41581_vvi-MIR164c:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>41320_ptc-MIR164e:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>41317_ptc-MIR164b:mirbase
Length = 162
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>41278_ctr-MIR164:mirbase
Length = 297
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 22 tggagaagcagggcacgtgca 42
>41221_csi-MIR164:mirbase
Length = 278
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 14 tggagaagcagggcacgtgca 34
>40345_rco-MIR164c:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgca 26
>40028_ath-MIR164b:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgca 23
>39817_aly-MIR164b:mirbase
Length = 161
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgca 31
|||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgca 23
>41321_ptc-MIR164f:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 9 gctggagaagcagggcacgtgcaaaatc 36
|||||||||||||||||| ||| |||||
Sbjct: 9 gctggagaagcagggcacatgctaaatc 36
>40029_ath-MIR164c:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgc 30
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
>39818_aly-MIR164c:mirbase
Length = 115
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tggagaagcagggcacgtgc 30
||||||||||||||||||||
Sbjct: 18 tggagaagcagggcacgtgc 37
