miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41330_ptc-MIR166i:mirbase
Length = 103
Score = 204 bits (103), Expect = 9e-54
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 1 tgtcttttgaggggaatgttgtttggttcaaggcctggccaccccatgtcttggaattta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtcttttgaggggaatgttgtttggttcaaggcctggccaccccatgtcttggaattta 60
Query: 61 aaatatcatgtcctcggaccaggcttcattcccctcaattact 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaatatcatgtcctcggaccaggcttcattcccctcaattact 103
>41333_ptc-MIR166l:mirbase
Length = 97
Score = 75.8 bits (38), Expect = 6e-15
Identities = 84/98 (85%), Gaps = 6/98 (6%)
Strand = Plus / Plus
Query: 4 cttttgaggggaatgttgtttggttcaaggcctggccaccccatgtcttggaatttaaaa 63
|||||| || ||||||||| ||||||||||| |||||||| ||| |||||| ||
Sbjct: 4 cttttgtggtgaatgttgtctggttcaaggcatggccaccacatctcttggtg-----aa 58
Query: 64 tatcatgtcctcggaccaggcttcattcccctcaatta 101
||| ||||||||||||||||||||||||||||||||||
Sbjct: 59 tat-atgtcctcggaccaggcttcattcccctcaatta 95
>41586_vvi-MIR166d:mirbase
Length = 160
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 72 cctcggaccaggcttcattcccctcaat 99
||||||||||||||||||||||||||||
Sbjct: 127 cctcggaccaggcttcattcccctcaat 154
>41171_aqc-MIR166e:mirbase
Length = 147
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 69 tgtcctcggaccaggcttcattcccctcaatt 100
|||| |||||||||||||||||||||||||||
Sbjct: 116 tgtcgtcggaccaggcttcattcccctcaatt 147
>39825_aly-MIR166e:mirbase
Length = 200
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcaatta 101
||||||||||||||||||||||||||||
Sbjct: 150 tcggaccaggcttcattcccctcaatta 177
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 tcttttgaggggaatgttgt 22
||||||||||||||||||||
Sbjct: 28 tcttttgaggggaatgttgt 47
>42517_sbi-MIR166j:mirbase
Length = 108
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 72 cctcggaccaggcttcattcccctca 97
||||||||||||||||||||||||||
Sbjct: 83 cctcggaccaggcttcattcccctca 108
>41942_osa-MIR166f:mirbase
Length = 107
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccctcaa 98
||||||||||||||||||||||||||
Sbjct: 71 ctcggaccaggcttcattcccctcaa 96
>41940_osa-MIR166d:mirbase
Length = 125
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccctcaa 98
||||||||||||||||||||||||||
Sbjct: 90 ctcggaccaggcttcattcccctcaa 115
>41747_bdi-MIR166e:mirbase
Length = 151
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccctcaa 98
||||||||||||||||||||||||||
Sbjct: 98 ctcggaccaggcttcattcccctcaa 123
>40038_ath-MIR166g:mirbase
Length = 122
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccctcaa 98
||||||||||||||||||||||||||
Sbjct: 84 ctcggaccaggcttcattcccctcaa 109
>39827_aly-MIR166g:mirbase
Length = 131
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccctcaa 98
||||||||||||||||||||||||||
Sbjct: 88 ctcggaccaggcttcattcccctcaa 113
>39469_ppt-MIR166f:mirbase
Length = 123
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 72 cctcggaccaggcttcattcccctca 97
||||||||||||||||||||||||||
Sbjct: 72 cctcggaccaggcttcattcccctca 97
>41937_osa-MIR166a:mirbase
Length = 145
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccctca 97
|||||||||||||||||||||||||
Sbjct: 109 ctcggaccaggcttcattcccctca 133
>41745_bdi-MIR166c:mirbase
Length = 172
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccctca 97
|||||||||||||||||||||||||
Sbjct: 120 ctcggaccaggcttcattcccctca 144
>41589_vvi-MIR166g:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcaa 98
|||||||||||||||||||||||||
Sbjct: 69 tcggaccaggcttcattcccctcaa 93
>41588_vvi-MIR166f:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcaa 98
|||||||||||||||||||||||||
Sbjct: 69 tcggaccaggcttcattcccctcaa 93
>41585_vvi-MIR166c:mirbase
Length = 160
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 69 tgtcctcggaccaggcttcattcccctcaatta 101
|||| ||||||||||||||||||||| ||||||
Sbjct: 124 tgtcgtcggaccaggcttcattccccccaatta 156
>41531_sly-MIR166a:mirbase
Length = 111
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcaa 98
|||||||||||||||||||||||||
Sbjct: 86 tcggaccaggcttcattcccctcaa 110
>41334_ptc-MIR166m:mirbase
Length = 105
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccctca 97
|||||||||||||||||||||||||
Sbjct: 75 ctcggaccaggcttcattcccctca 99
>41327_ptc-MIR166f:mirbase
Length = 105
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcaa 98
|||||||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattcccctcaa 100
>41325_ptc-MIR166d:mirbase
Length = 105
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcaa 98
|||||||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattcccctcaa 100
>40672_mtr-MIR166e:mirbase
Length = 106
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcaa 98
|||||||||||||||||||||||||
Sbjct: 81 tcggaccaggcttcattcccctcaa 105
>40347_rco-MIR166a:mirbase
Length = 149
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 71 tcctcggaccaggcttcattcccct 95
|||||||||||||||||||||||||
Sbjct: 121 tcctcggaccaggcttcattcccct 145
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 aggggaatgttgtttggttcaaggcct 36
||||||||||||| |||||||||||||
Sbjct: 3 aggggaatgttgtctggttcaaggcct 29
>40266_bna-MIR166c:mirbase
Length = 128
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcaa 98
|||||||||||||||||||||||||
Sbjct: 93 tcggaccaggcttcattcccctcaa 117
>40265_bna-MIR166b:mirbase
Length = 118
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcaa 98
|||||||||||||||||||||||||
Sbjct: 91 tcggaccaggcttcattcccctcaa 115
>40037_ath-MIR166f:mirbase
Length = 105
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcaa 98
|||||||||||||||||||||||||
Sbjct: 78 tcggaccaggcttcattcccctcaa 102
>40036_ath-MIR166e:mirbase
Length = 143
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcaa 98
|||||||||||||||||||||||||
Sbjct: 119 tcggaccaggcttcattcccctcaa 143
>39826_aly-MIR166f:mirbase
Length = 105
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcaa 98
|||||||||||||||||||||||||
Sbjct: 78 tcggaccaggcttcattcccctcaa 102
>39822_aly-MIR166b:mirbase
Length = 148
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccctcaatta 101
|||||||||||||||||||||| ||||||
Sbjct: 109 ctcggaccaggcttcattccccccaatta 137
>39734_smo-MIR166b:mirbase
Length = 136
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccctca 97
|||||||||||||||||||||||||
Sbjct: 98 ctcggaccaggcttcattcccctca 122
>39733_smo-MIR166a:mirbase
Length = 145
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccctca 97
|||||||||||||||||||||||||
Sbjct: 107 ctcggaccaggcttcattcccctca 131
>41587_vvi-MIR166e:mirbase
Length = 166
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 69 tgtcctcggaccaggcttcattcccctcaatt 100
|||| ||||||||||||||||||||| |||||
Sbjct: 130 tgtcgtcggaccaggcttcattccccccaatt 161
>41324_ptc-MIR166c:mirbase
Length = 134
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcaatta 101
||||||||||||||||||||| ||||||
Sbjct: 105 tcggaccaggcttcattccccccaatta 132
>40439_gma-MIR166a:mirbase
Length = 146
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcaatta 101
||||||||||||||||||||| ||||||
Sbjct: 107 tcggaccaggcttcattccccccaatta 134
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgtcttttgaggggaatgttgt 22
||||||||||||||||||||||
Sbjct: 11 tgtcttttgaggggaatgttgt 32
>39735_smo-MIR166c:mirbase
Length = 138
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 107 tcggaccaggcttcattcccctca 130
>39470_ppt-MIR166g:mirbase
Length = 146
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 96 tcggaccaggcttcattcccctca 119
>39468_ppt-MIR166e:mirbase
Length = 146
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 96 tcggaccaggcttcattcccctca 119
>39465_ppt-MIR166b:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccctca 97
>39464_ppt-MIR166a:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccctca 97
>39421_pta-MIR166b:mirbase
Length = 125
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctca 97
||||||||||||||||||||||||
Sbjct: 90 tcggaccaggcttcattcccctca 113
>41532_sly-MIR166b:mirbase
Length = 201
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcaatt 100
||||||||||||||||||||| |||||
Sbjct: 154 tcggaccaggcttcattccccccaatt 180
>41322_ptc-MIR166a:mirbase
Length = 164
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcaatt 100
||||||||||||||||||||| |||||
Sbjct: 135 tcggaccaggcttcattccccccaatt 161
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 tcttttgaggggaatgttgt 22
||||||||||||||||||||
Sbjct: 3 tcttttgaggggaatgttgt 22
>41168_aqc-MIR166b:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcaatt 100
||||||||||||||||||||| |||||
Sbjct: 68 tcggaccaggcttcattccccccaatt 94
>40674_mtr-MIR166g:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccctcaat 99
|||||||||||||||||||||| ||||
Sbjct: 81 ctcggaccaggcttcattccccccaat 107
>40351_rco-MIR166e:mirbase
Length = 131
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 69 tgtcctcggaccaggcttcattcccctcaat 99
|||| ||||||||||||||||||||| ||||
Sbjct: 101 tgtcgtcggaccaggcttcattccccccaat 131
>40032_ath-MIR166a:mirbase
Length = 170
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcaatt 100
||||||||||||||||||||| |||||
Sbjct: 134 tcggaccaggcttcattccccccaatt 160
>39821_aly-MIR166a:mirbase
Length = 167
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcaatt 100
||||||||||||||||||||| |||||
Sbjct: 133 tcggaccaggcttcattccccccaatt 159
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 3 tcttttgaggggaatgttgt 22
||||||||||||||||||||
Sbjct: 10 tcttttgaggggaatgttgt 29
>39467_ppt-MIR166d:mirbase
Length = 128
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctc 96
|||||||||||||||||||||||
Sbjct: 82 tcggaccaggcttcattcccctc 104
>39466_ppt-MIR166c:mirbase
Length = 123
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctc 96
|||||||||||||||||||||||
Sbjct: 77 tcggaccaggcttcattcccctc 99
>42725_zma-MIR166i:mirbase
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 62 ctcggaccaggcttcattcccc 83
>42721_zma-MIR166e:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 66 ctcggaccaggcttcattcccc 87
>42720_zma-MIR166d:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 83 ctcggaccaggcttcattcccc 104
>42719_zma-MIR166c:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 71 ctcggaccaggcttcattcccc 92
>42718_zma-MIR166b:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 95 ctcggaccaggcttcattcccc 116
>42717_zma-MIR166a:mirbase
Length = 213
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 188 ctcggaccaggcttcattcccc 209
>42516_sbi-MIR166i:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 65 ctcggaccaggcttcattcccc 86
>42515_sbi-MIR166h:mirbase
Length = 185
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 161 ctcggaccaggcttcattcccc 182
>42511_sbi-MIR166d:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 66 ctcggaccaggcttcattcccc 87
>42508_sbi-MIR166a:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 87 ctcggaccaggcttcattcccc 108
>41949_osa-MIR166m:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 72 cctcggaccaggcttcattccc 93
||||||||||||||||||||||
Sbjct: 145 cctcggaccaggcttcattccc 166
>41938_osa-MIR166b:mirbase
Length = 206
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 167 ctcggaccaggcttcattcccc 188
>41744_bdi-MIR166b:mirbase
Length = 244
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 191 ctcggaccaggcttcattcccc 212
>41590_vvi-MIR166h:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ctcggaccaggcttcattcccc 94
||||||||||||||||||||||
Sbjct: 68 ctcggaccaggcttcattcccc 89
>41332_ptc-MIR166k:mirbase
Length = 143
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 74 tcggaccaggcttcattcccctcaat 99
||||||||||||||||||||| ||||
Sbjct: 114 tcggaccaggcttcattccccccaat 139
