miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41371_ptc-MIR169q:mirbase
Length = 115
Score = 228 bits (115), Expect = 7e-61
Identities = 115/115 (100%)
Strand = Plus / Plus
Query: 1 tcttgttagttagccaaggacgacttgcctgttcctagcaatttgggatttgccctggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcttgttagttagccaaggacgacttgcctgttcctagcaatttgggatttgccctggac 60
Query: 61 taagaggcaggaccctcattccgggtttcaggcagtctccttggctaggttgaca 115
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taagaggcaggaccctcattccgggtttcaggcagtctccttggctaggttgaca 115
>41535_sly-MIR169b:mirbase
Length = 205
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 ggtttcaggcagtctccttggcta 107
||||||||||||||||||||||||
Sbjct: 10 ggtttcaggcagtctccttggcta 33
>40283_bna-MIR169l:mirbase
Length = 199
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 ggtttcaggcagtctccttggcta 107
||||||||||||||||||||||||
Sbjct: 151 ggtttcaggcagtctccttggcta 174
>40281_bna-MIR169j:mirbase
Length = 167
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 ggtttcaggcagtctccttggcta 107
||||||||||||||||||||||||
Sbjct: 135 ggtttcaggcagtctccttggcta 158
>40054_ath-MIR169j:mirbase
Length = 221
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 ggtttcaggcagtctccttggcta 107
||||||||||||||||||||||||
Sbjct: 173 ggtttcaggcagtctccttggcta 196
>39845_aly-MIR169l:mirbase
Length = 272
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 ggtttcaggcagtctccttggcta 107
||||||||||||||||||||||||
Sbjct: 183 ggtttcaggcagtctccttggcta 206
>39843_aly-MIR169j:mirbase
Length = 300
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 ggtttcaggcagtctccttggcta 107
||||||||||||||||||||||||
Sbjct: 204 ggtttcaggcagtctccttggcta 227
>41363_ptc-MIR169i:mirbase
Length = 123
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 gtttcaggcagtctccttggcta 107
|||||||||||||||||||||||
Sbjct: 92 gtttcaggcagtctccttggcta 114
>40280_bna-MIR169i:mirbase
Length = 174
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 gtttcaggcagtctccttggcta 107
|||||||||||||||||||||||
Sbjct: 138 gtttcaggcagtctccttggcta 160
>40276_bna-MIR169e:mirbase
Length = 277
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 gtttcaggcagtctccttggcta 107
|||||||||||||||||||||||
Sbjct: 1 gtttcaggcagtctccttggcta 23
>41367_ptc-MIR169m:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 83 gggtttcaggcagtctccttggcta 107
||||||||||| |||||||||||||
Sbjct: 86 gggtttcaggcggtctccttggcta 110
>42753_zma-MIR169k:mirbase
Length = 133
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 caggcagtctccttggctag 108
||||||||||||||||||||
Sbjct: 95 caggcagtctccttggctag 114
>42752_zma-MIR169j:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 caggcagtctccttggctag 108
||||||||||||||||||||
Sbjct: 114 caggcagtctccttggctag 133
>42535_sbi-MIR169g:mirbase
Length = 152
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 caggcagtctccttggctag 108
||||||||||||||||||||
Sbjct: 115 caggcagtctccttggctag 134
>42534_sbi-MIR169f:mirbase
Length = 148
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 caggcagtctccttggctag 108
||||||||||||||||||||
Sbjct: 110 caggcagtctccttggctag 129
>41976_osa-MIR169m:mirbase
Length = 138
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 caggcagtctccttggctag 108
||||||||||||||||||||
Sbjct: 109 caggcagtctccttggctag 128
>41974_osa-MIR169k:mirbase
Length = 156
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 caggcagtctccttggctag 108
||||||||||||||||||||
Sbjct: 127 caggcagtctccttggctag 146
>41973_osa-MIR169j:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 caggcagtctccttggctag 108
||||||||||||||||||||
Sbjct: 96 caggcagtctccttggctag 115
>41757_bdi-MIR169e:mirbase
Length = 164
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 caggcagtctccttggctag 108
||||||||||||||||||||
Sbjct: 113 caggcagtctccttggctag 132
>41375_ptc-MIR169u:mirbase
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tagccaaggacgacttgcct 30
||||||||||||||||||||
Sbjct: 11 tagccaaggacgacttgcct 30
>41365_ptc-MIR169k:mirbase
Length = 203
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 tcttgttagttagccaaggacgacttgcctgt 32
||||||| | |||||||||| |||||||||||
Sbjct: 1 tcttgtttggtagccaaggatgacttgcctgt 32
>41364_ptc-MIR169j:mirbase
Length = 137
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 caggcagtctccttggctag 108
||||||||||||||||||||
Sbjct: 111 caggcagtctccttggctag 130
>41354_ptc-MIR169ae:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 2 cttgttagttagccaaggacgacttgcc 29
|||||| | |||||||||||||||||||
Sbjct: 1 cttgtttggtagccaaggacgacttgcc 28
>41351_ptc-MIR169ab:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 2 cttgttagttagccaaggacgacttgcc 29
|||||| | |||||||||||||||||||
Sbjct: 1 cttgtttggtagccaaggacgacttgcc 28
>41111_tcc-MIR169j:mirbase
Length = 141
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 tcttgttagttagccaaggacgacttgcctgt 32
||||||| | |||||||||| |||||||||||
Sbjct: 11 tcttgtttgatagccaaggatgacttgcctgt 42
>40058_ath-MIR169n:mirbase
Length = 215
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 84 ggtttcaggcagtctccttggcta 107
|||||||||||||||| |||||||
Sbjct: 168 ggtttcaggcagtctctttggcta 191
>40057_ath-MIR169m:mirbase
Length = 212
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 tcaggcagtctccttggcta 107
||||||||||||||||||||
Sbjct: 150 tcaggcagtctccttggcta 169
>40056_ath-MIR169l:mirbase
Length = 211
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 84 ggtttcaggcagtctccttggcta 107
|||||||||||||||| |||||||
Sbjct: 167 ggtttcaggcagtctctttggcta 190
>40055_ath-MIR169k:mirbase
Length = 213
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 tcaggcagtctccttggcta 107
||||||||||||||||||||
Sbjct: 149 tcaggcagtctccttggcta 168
>40053_ath-MIR169i:mirbase
Length = 206
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 tcaggcagtctccttggcta 107
||||||||||||||||||||
Sbjct: 146 tcaggcagtctccttggcta 165
>40052_ath-MIR169h:mirbase
Length = 190
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 tcaggcagtctccttggcta 107
||||||||||||||||||||
Sbjct: 127 tcaggcagtctccttggcta 146
>39847_aly-MIR169n:mirbase
Length = 252
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 84 ggtttcaggcagtctccttggcta 107
|||||||||||||||| |||||||
Sbjct: 178 ggtttcaggcagtctctttggcta 201
>39844_aly-MIR169k:mirbase
Length = 203
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 tcaggcagtctccttggcta 107
||||||||||||||||||||
Sbjct: 143 tcaggcagtctccttggcta 162
>39841_aly-MIR169h:mirbase
Length = 205
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 tcaggcagtctccttggcta 107
||||||||||||||||||||
Sbjct: 137 tcaggcagtctccttggcta 156
