miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00643;MIR171_1;AARH01006440.1/11723-11624 3694:Populus
trichocarpa
Length = 100
Score = 155 bits (78), Expect = 1e-37
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 1 gatactggctcggttcaacctcatcgtagtcttgatgaatgattcaaatctatggttgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gatactggctcggttcaacctcatcgtagtcttgatgaatgattcaaatctatggttgga 70
Query: 61 ttgagccgcgccaatatc 78
||||||||||||||||||
Sbjct: 71 ttgagccgcgccaatatc 88
>RF00643;MIR171_1;AARH01005205.1/74318-74417 3694:Populus
trichocarpa
Length = 100
Score = 91.7 bits (46), Expect = 1e-18
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 31 cttgatgaatgattcaaatctatggttggattgagccgcgccaata 76
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 cttgatgaatgattcaaatctatggttggattgagccgcgccaata 86
>RF00643;MIR171_1;ABIM01001615.1/3078-3177 3649:Carica papaya
(papaya)
Length = 100
Score = 44.1 bits (22), Expect = 3e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 tggttggattgagccgcgccaatatc 78
||||| ||||||||||||||||||||
Sbjct: 63 tggtttgattgagccgcgccaatatc 88
