miRNEST 2.0, an integrative microRNA resource :: BLAST
>41399_ptc-MIR172e:mirbase
Length = 133
Score = 264 bits (133), Expect = 1e-71
Identities = 133/133 (100%)
Strand = Plus / Plus
Query: 1 atattggccgatgcggcagcatcaagattcacaaactttaaggcttgagttggggtggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atattggccgatgcggcagcatcaagattcacaaactttaaggcttgagttggggtggta 60
Query: 61 cacggtcacctcctttactcgaaaggttccttaatttctgatgggaatcttgatgatgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cacggtcacctcctttactcgaaaggttccttaatttctgatgggaatcttgatgatgct 120
Query: 121 gcatcggcaaata 133
|||||||||||||
Sbjct: 121 gcatcggcaaata 133
>41398_ptc-MIR172d:mirbase
Length = 182
Score = 79.8 bits (40), Expect = 5e-16
Identities = 69/78 (88%), Gaps = 3/78 (3%)
Strand = Plus / Plus
Query: 3 attggccgatgcggcagcatcaagattcacaaactttaaggcttgagt---tggggtggt 59
|||||| ||||||||| ||||||||||||||| ||||||||||||||| |||||||
Sbjct: 3 attggcggatgcggcatcatcaagattcacaagctttaaggcttgagtgagaggggtggc 62
Query: 60 acacggtcacctccttta 77
| ||||||||||||||||
Sbjct: 63 atacggtcacctccttta 80
Score = 75.8 bits (38), Expect = 7e-15
Identities = 86/101 (85%), Gaps = 7/101 (6%)
Strand = Plus / Plus
Query: 36 ctttaaggcttgagtt---ggggtggtacacggtcacctcctttactcgaaaggttcctt 92
||||||||||||||| ||||||| | |||||||||||||||| || ||||| |||||
Sbjct: 86 ctttaaggcttgagtgagaggggtggcatacggtcacctcctttagtccaaagggtcctt 145
Query: 93 aatttctgatgggaatcttgatgatgctgcatcggcaaata 133
|| |||||||||||||||||||||||||||||||||
Sbjct: 146 tttt----atgggaatcttgatgatgctgcatcggcaaata 182
>41126_tcc-MIR172c:mirbase
Length = 163
Score = 58.0 bits (29), Expect = 2e-09
Identities = 57/66 (86%), Gaps = 4/66 (6%)
Strand = Plus / Plus
Query: 66 tcacctcctttactcgaaaggttccttaatttctgatgggaatcttgatgatgctgcatc 125
|||||||||||||||||||| | |||| || |||||||||||||||||||||||||
Sbjct: 89 tcacctcctttactcgaaagttacctt----tcaaatgggaatcttgatgatgctgcatc 144
Query: 126 ggcaaa 131
|||||
Sbjct: 145 agcaaa 150
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 10 gatgcggcagcatcaagattcacaaacttta 40
||||||||| |||||||||||||||||||||
Sbjct: 20 gatgcggcatcatcaagattcacaaacttta 50
>41767_bdi-MIR172a:mirbase
Length = 153
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 99 tgatgggaatcttgatgatgctgcatcggcaa 130
||||| ||||||||||||||||||||||||||
Sbjct: 94 tgatgagaatcttgatgatgctgcatcggcaa 125
>40067_ath-MIR172e:mirbase
Length = 125
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 102 tgggaatcttgatgatgctgcatcggcaaata 133
|||||||||||||||||||||||| |||||||
Sbjct: 93 tgggaatcttgatgatgctgcatcagcaaata 124
>39856_aly-MIR172e:mirbase
Length = 133
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 102 tgggaatcttgatgatgctgcatcggcaaata 133
|||||||||||||||||||||||| |||||||
Sbjct: 96 tgggaatcttgatgatgctgcatcagcaaata 127
>41631_vvi-MIR172a:mirbase
Length = 110
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 100 gatgggaatcttgatgatgctgcatcggcaa 130
|||| ||||||||||||||||||||||||||
Sbjct: 33 gatgagaatcttgatgatgctgcatcggcaa 3
>41184_aqc-MIR172b:mirbase
Length = 108
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 100 gatgggaatcttgatgatgctgcatcg 126
|||||||||||||||||||||||||||
Sbjct: 82 gatgggaatcttgatgatgctgcatcg 108
>41991_osa-MIR172b:mirbase
Length = 238
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 102 tgggaatcttgatgatgctgcatcgg 127
||||||||||||||||||||||||||
Sbjct: 206 tgggaatcttgatgatgctgcatcgg 231
>41768_bdi-MIR172b:mirbase
Length = 254
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 102 tgggaatcttgatgatgctgcatcgg 127
||||||||||||||||||||||||||
Sbjct: 202 tgggaatcttgatgatgctgcatcgg 227
>41632_vvi-MIR172b:mirbase
Length = 118
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 105 gaatcttgatgatgctgcatcggcaa 130
||||||||||||||||||||||||||
Sbjct: 28 gaatcttgatgatgctgcatcggcaa 3
>41400_ptc-MIR172f:mirbase
Length = 161
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcatcggcaa 130
||||||||||||||||||||||||||
Sbjct: 133 gaatcttgatgatgctgcatcggcaa 158
>41396_ptc-MIR172b:mirbase
Length = 140
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcatcggcaa 130
||||||||||||||||||||||||||
Sbjct: 112 gaatcttgatgatgctgcatcggcaa 137
>41128_tcc-MIR172e:mirbase
Length = 189
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcatcggcaa 130
||||||||||||||||||||||||||
Sbjct: 150 gaatcttgatgatgctgcatcggcaa 175
>41124_tcc-MIR172a:mirbase
Length = 154
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 101 atgggaatcttgatgatgctgcatcggcaa 130
||||||||||||||||||||||| ||||||
Sbjct: 112 atgggaatcttgatgatgctgcagcggcaa 141
>39852_aly-MIR172a:mirbase
Length = 149
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcatcggcaa 130
||||||||||||||||||||||||||
Sbjct: 100 gaatcttgatgatgctgcatcggcaa 125
>41993_osa-MIR172d:mirbase
Length = 130
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 99 tgatgggaatcttgatgatgctgcatcggcaaa 131
||||| ||||||||||||||||||||| |||||
Sbjct: 86 tgatgagaatcttgatgatgctgcatcagcaaa 118
>41633_vvi-MIR172c:mirbase
Length = 138
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 102 tgggaatcttgatgatgctgcatcggcaa 130
|||||||||||||||||||||| ||||||
Sbjct: 106 tgggaatcttgatgatgctgcagcggcaa 134
>41402_ptc-MIR172h:mirbase
Length = 143
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 102 tgggaatcttgatgatgctgcatcggcaa 130
|||||||||||||||||||||| ||||||
Sbjct: 112 tgggaatcttgatgatgctgcagcggcaa 140
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 7 gccgatgcggcagcatcaagattcacaaacttta 40
||||||| ||| |||||||||||||||||||||
Sbjct: 7 gccgatggagcaccatcaagattcacaaacttta 40
>41401_ptc-MIR172g:mirbase
Length = 143
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 102 tgggaatcttgatgatgctgcatcggcaa 130
|||||||||||||||||||||| ||||||
Sbjct: 112 tgggaatcttgatgatgctgcagcggcaa 140
>40366_rco-MIR172:mirbase
Length = 144
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 101 atgggaatcttgatgatgctgcatcggca 129
||||||||||||||||||||||| |||||
Sbjct: 116 atgggaatcttgatgatgctgcagcggca 144
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 catcaagattcacaaacttta 40
|||||||||||||||||||||
Sbjct: 13 catcaagattcacaaacttta 33
>41125_tcc-MIR172b:mirbase
Length = 160
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcatcggc 128
||||||||||||||||||||||||
Sbjct: 121 gaatcttgatgatgctgcatcggc 144
>40063_ath-MIR172a:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcatcggc 128
||||||||||||||||||||||||
Sbjct: 79 gaatcttgatgatgctgcatcggc 102
>42779_zma-MIR172e:mirbase
Length = 174
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 102 tgggaatcttgatgatgctgcat 124
|||||||||||||||||||||||
Sbjct: 133 tgggaatcttgatgatgctgcat 155
>42558_sbi-MIR172b:mirbase
Length = 170
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 102 tgggaatcttgatgatgctgcat 124
|||||||||||||||||||||||
Sbjct: 148 tgggaatcttgatgatgctgcat 170
>40462_gma-MIR172e:mirbase
Length = 153
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 101 atgggaatcttgatgatgctgca 123
|||||||||||||||||||||||
Sbjct: 111 atgggaatcttgatgatgctgca 133
>40461_gma-MIR172d:mirbase
Length = 150
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 101 atgggaatcttgatgatgctgca 123
|||||||||||||||||||||||
Sbjct: 108 atgggaatcttgatgatgctgca 130
>40460_gma-MIR172c:mirbase
Length = 153
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 101 atgggaatcttgatgatgctgca 123
|||||||||||||||||||||||
Sbjct: 111 atgggaatcttgatgatgctgca 133
>41725_ata-MIR172:mirbase
Length = 277
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 100 gatgggaatcttgatgatgctgcatc 125
|||| |||||||||||||||||||||
Sbjct: 205 gatgagaatcttgatgatgctgcatc 230
>40066_ath-MIR172d:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcatcggcaa 130
||||||||||||||||||| ||||||
Sbjct: 89 gaatcttgatgatgctgcagcggcaa 114
>39855_aly-MIR172d:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcatcggcaa 130
||||||||||||||||||| ||||||
Sbjct: 113 gaatcttgatgatgctgcagcggcaa 138
>42778_zma-MIR172d:mirbase
Length = 74
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 100 gatgggaatcttgatgatgctgcat 124
|||| ||||||||||||||||||||
Sbjct: 50 gatgagaatcttgatgatgctgcat 74
>42777_zma-MIR172c:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 100 gatgggaatcttgatgatgctgcat 124
|||| ||||||||||||||||||||
Sbjct: 99 gatgagaatcttgatgatgctgcat 123
>42776_zma-MIR172b:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 100 gatgggaatcttgatgatgctgcat 124
|||| ||||||||||||||||||||
Sbjct: 102 gatgagaatcttgatgatgctgcat 126
>42559_sbi-MIR172c:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 100 gatgggaatcttgatgatgctgcat 124
|||| ||||||||||||||||||||
Sbjct: 95 gatgagaatcttgatgatgctgcat 119
>42557_sbi-MIR172a:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 100 gatgggaatcttgatgatgctgcat 124
|||| ||||||||||||||||||||
Sbjct: 78 gatgagaatcttgatgatgctgcat 102
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 100 gatgggaatcttgatgatgctgca 123
|||| |||||||||||||||||||
Sbjct: 25 gatgtgaatcttgatgatgctgca 2
>41990_osa-MIR172a:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcatc 125
|||||||||||||||||||||
Sbjct: 80 gaatcttgatgatgctgcatc 100
>41634_vvi-MIR172d:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 105 gaatcttgatgatgctgcatc 125
|||||||||||||||||||||
Sbjct: 28 gaatcttgatgatgctgcatc 8
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 100 gatgggaatcttgatgatgctgcat 124
|||| ||||||||||||||||||||
Sbjct: 75 gatgagaatcttgatgatgctgcat 99
>41397_ptc-MIR172c:mirbase
Length = 128
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcatc 125
|||||||||||||||||||||
Sbjct: 100 gaatcttgatgatgctgcatc 120
>41395_ptc-MIR172a:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcatc 125
|||||||||||||||||||||
Sbjct: 101 gaatcttgatgatgctgcatc 121
>41183_aqc-MIR172a:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcatc 125
|||||||||||||||||||||
Sbjct: 99 gaatcttgatgatgctgcatc 119
>40463_gma-MIR172f:mirbase
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcatc 125
|||||||||||||||||||||
Sbjct: 110 gaatcttgatgatgctgcatc 130
>40459_gma-MIR172b:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcatc 125
|||||||||||||||||||||
Sbjct: 115 gaatcttgatgatgctgcatc 135
>40458_gma-MIR172a:mirbase
Length = 159
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 105 gaatcttgatgatgctgcatcggcaaata 133
|||||||||||||||| |||| |||||||
Sbjct: 40 gaatcttgatgatgctacatccgcaaata 12
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcatc 125
|||||||||||||||||||||
Sbjct: 121 gaatcttgatgatgctgcatc 141
>40324_bra-MIR172b:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcatc 125
|||||||||||||||||||||
Sbjct: 83 gaatcttgatgatgctgcatc 103
>40323_bra-MIR172a:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcatc 125
|||||||||||||||||||||
Sbjct: 88 gaatcttgatgatgctgcatc 108
>40307_bol-MIR172b:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcatc 125
|||||||||||||||||||||
Sbjct: 83 gaatcttgatgatgctgcatc 103
>40306_bol-MIR172a:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcatc 125
|||||||||||||||||||||
Sbjct: 88 gaatcttgatgatgctgcatc 108
>40064_ath-MIR172b:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcatc 125
|||||||||||||||||||||
Sbjct: 72 gaatcttgatgatgctgcatc 92
>39853_aly-MIR172b:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcatc 125
|||||||||||||||||||||
Sbjct: 94 gaatcttgatgatgctgcatc 114
>42775_zma-MIR172a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcat 124
||||||||||||||||||||
Sbjct: 64 gaatcttgatgatgctgcat 83
>42560_sbi-MIR172d:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcat 124
||||||||||||||||||||
Sbjct: 69 gaatcttgatgatgctgcat 88
>41543_sly-MIR172b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcat 124
||||||||||||||||||||
Sbjct: 116 gaatcttgatgatgctgcat 135
>41542_sly-MIR172a:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcat 124
||||||||||||||||||||
Sbjct: 87 gaatcttgatgatgctgcat 106
>41235_csi-MIR172c:mirbase
Length = 163
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 104 ggaatcttgatgatgctgca 123
||||||||||||||||||||
Sbjct: 120 ggaatcttgatgatgctgca 139
>41233_csi-MIR172a:mirbase
Length = 162
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 105 gaatcttgatgatgctgcatcggc 128
||||||||||||||||||| ||||
Sbjct: 116 gaatcttgatgatgctgcaacggc 139
