miRNEST 2.0, an integrative microRNA resource :: BLAST
>41402_ptc-MIR172h:mirbase
Length = 143
Score = 283 bits (143), Expect = 2e-77
Identities = 143/143 (100%)
Strand = Plus / Plus
Query: 1 ctgtttgccgatggagcaccatcaagattcacaaactttattagggctaataagtggtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgtttgccgatggagcaccatcaagattcacaaactttattagggctaataagtggtga 60
Query: 61 tgatggtggcttttggtggtcccttcgtttcaacccaatagccatttgaattgggaatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgatggtggcttttggtggtcccttcgtttcaacccaatagccatttgaattgggaatct 120
Query: 121 tgatgatgctgcagcggcaataa 143
|||||||||||||||||||||||
Sbjct: 121 tgatgatgctgcagcggcaataa 143
>41401_ptc-MIR172g:mirbase
Length = 143
Score = 204 bits (103), Expect = 1e-53
Identities = 133/143 (93%)
Strand = Plus / Plus
Query: 1 ctgtttgccgatggagcaccatcaagattcacaaactttattagggctaataagtggtga 60
||||||||| |||||||| ||||||||||||||| |||||||||||||| | |||||||
Sbjct: 1 ctgtttgcctatggagcatcatcaagattcacaagctttattagggctagtgtgtggtga 60
Query: 61 tgatggtggcttttggtggtcccttcgtttcaacccaatagccatttgaattgggaatct 120
||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||
Sbjct: 61 tgatggtggcttttggtggtccctttttttcaatccaatagccctttgaattgggaatct 120
Query: 121 tgatgatgctgcagcggcaataa 143
|||||||||||||||||||||||
Sbjct: 121 tgatgatgctgcagcggcaataa 143
>41633_vvi-MIR172c:mirbase
Length = 138
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 112 tgggaatcttgatgatgctgcagcggcaataa 143
||||||||||||||||||||||||||||||||
Sbjct: 106 tgggaatcttgatgatgctgcagcggcaataa 137
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 3 gtttgccgatggagcaccatcaagattcacaa 34
|||||| ||||||||| |||||||||||||||
Sbjct: 1 gtttgcggatggagcatcatcaagattcacaa 32
>41235_csi-MIR172c:mirbase
Length = 163
Score = 63.9 bits (32), Expect = 3e-11
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 1 ctgtttgccgatggagcaccatcaagattcacaaactttattagggctaataagtggtga 60
|||||||| | ||||||||||||||||||||||||| |||||||| || | ||||| ||
Sbjct: 2 ctgtttgcagttggagcaccatcaagattcacaaac--tattagggttagtgagtggaga 59
Query: 61 tgatggtggct 71
| |||||||||
Sbjct: 60 taatggtggct 70
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 114 ggaatcttgatgatgctgcagc 135
||||||||||||||||||||||
Sbjct: 120 ggaatcttgatgatgctgcagc 141
>41124_tcc-MIR172a:mirbase
Length = 154
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 112 tgggaatcttgatgatgctgcagcggcaataa 143
||||||||||||||||||||||||||||||||
Sbjct: 113 tgggaatcttgatgatgctgcagcggcaataa 144
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 ctgtttgccgatggagcaccatcaagattcacaaa 35
|||||||| ||||||||| ||||||||||||||||
Sbjct: 8 ctgtttgctgatggagcatcatcaagattcacaaa 42
>40366_rco-MIR172:mirbase
Length = 144
Score = 58.0 bits (29), Expect = 2e-09
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 10 gatggagcaccatcaagattcacaaactttat-tagggcta 49
||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 3 gatggagcatcatcaagattcacaaactttatctagggcta 43
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 112 tgggaatcttgatgatgctgcagcggca 139
||||||||||||||||||||||||||||
Sbjct: 117 tgggaatcttgatgatgctgcagcggca 144
>40462_gma-MIR172e:mirbase
Length = 153
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1 ctgtttgccgatggagcaccatcaagattcacaaacttta 40
|||||||||| ||||||| ||||||||||||||| |||||
Sbjct: 11 ctgtttgccggtggagcatcatcaagattcacaagcttta 50
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 112 tgggaatcttgatgatgctgcagcggcaataa 143
|||||||||||||||||||||||| |||||||
Sbjct: 112 tgggaatcttgatgatgctgcagcagcaataa 143
>40461_gma-MIR172d:mirbase
Length = 150
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 112 tgggaatcttgatgatgctgcagcggcaataa 143
|||||||||||||||||||||||| |||||||
Sbjct: 109 tgggaatcttgatgatgctgcagcagcaataa 140
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 5 ttgccgatggagcaccatcaagattcacaa 34
|||| ||||||||| |||||||||||||||
Sbjct: 15 ttgcagatggagcatcatcaagattcacaa 44
>40460_gma-MIR172c:mirbase
Length = 153
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1 ctgtttgccgatggagcaccatcaagattcacaaacttta 40
|||||||||| ||||||| ||||||||||||||| |||||
Sbjct: 11 ctgtttgccggtggagcatcatcaagattcacaagcttta 50
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 112 tgggaatcttgatgatgctgcagcggcaataa 143
|||||||||||||||||||||||| |||||||
Sbjct: 112 tgggaatcttgatgatgctgcagcagcaataa 143
>40066_ath-MIR172d:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 115 gaatcttgatgatgctgcagcggcaat 141
|||||||||||||||||||||||||||
Sbjct: 89 gaatcttgatgatgctgcagcggcaat 115
>39855_aly-MIR172d:mirbase
Length = 163
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 115 gaatcttgatgatgctgcagcggcaat 141
|||||||||||||||||||||||||||
Sbjct: 113 gaatcttgatgatgctgcagcggcaat 139
>41400_ptc-MIR172f:mirbase
Length = 161
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 115 gaatcttgatgatgctgcagcggcaataa 143
||||||||||||||||||| |||||||||
Sbjct: 133 gaatcttgatgatgctgcatcggcaataa 161
>41399_ptc-MIR172e:mirbase
Length = 133
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 112 tgggaatcttgatgatgctgcagcggcaa 140
|||||||||||||||||||||| ||||||
Sbjct: 102 tgggaatcttgatgatgctgcatcggcaa 130
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 7 gccgatggagcaccatcaagattcacaaacttta 40
||||||| ||| |||||||||||||||||||||
Sbjct: 7 gccgatgcggcagcatcaagattcacaaacttta 40
>41398_ptc-MIR172d:mirbase
Length = 182
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 112 tgggaatcttgatgatgctgcagcggcaa 140
|||||||||||||||||||||| ||||||
Sbjct: 151 tgggaatcttgatgatgctgcatcggcaa 179
>41396_ptc-MIR172b:mirbase
Length = 140
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 115 gaatcttgatgatgctgcagcggcaataa 143
||||||||||||||||||| |||||||||
Sbjct: 112 gaatcttgatgatgctgcatcggcaataa 140
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 2 tgtttgccgatggagcaccatcaagattcaca 33
||||||| | ||||||| ||||||||||||||
Sbjct: 2 tgtttgcgggtggagcatcatcaagattcaca 33
>41128_tcc-MIR172e:mirbase
Length = 189
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 115 gaatcttgatgatgctgcagcggcaataa 143
||||||||||||||||||| |||||||||
Sbjct: 150 gaatcttgatgatgctgcatcggcaataa 178
>41632_vvi-MIR172b:mirbase
Length = 118
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 115 gaatcttgatgatgctgcagcggcaata 142
||||||||||||||||||| ||||||||
Sbjct: 28 gaatcttgatgatgctgcatcggcaata 1
>41631_vvi-MIR172a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 115 gaatcttgatgatgctgcagcggcaata 142
||||||||||||||||||| ||||||||
Sbjct: 28 gaatcttgatgatgctgcatcggcaata 1
>41126_tcc-MIR172c:mirbase
Length = 163
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 2 tgtttgccgatggagcaccatcaagattcacaaacttta 40
||||||| |||| ||| |||||||||||||||||||||
Sbjct: 12 tgtttgcagatgcggcatcatcaagattcacaaacttta 50
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 tgggaatcttgatgatgctgca 133
||||||||||||||||||||||
Sbjct: 121 tgggaatcttgatgatgctgca 142
>40065_ath-MIR172c:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 115 gaatcttgatgatgctgcagcggcaat 141
||||||||||||||||||||| |||||
Sbjct: 99 gaatcttgatgatgctgcagctgcaat 125
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tggagcaccatcaagattcacaaa 35
||||||| ||||||||||||||||
Sbjct: 17 tggagcatcatcaagattcacaaa 40
>39854_aly-MIR172c:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 115 gaatcttgatgatgctgcagcggcaat 141
||||||||||||||||||||| |||||
Sbjct: 99 gaatcttgatgatgctgcagctgcaat 125
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tggagcaccatcaagattcacaaa 35
||||||| ||||||||||||||||
Sbjct: 17 tggagcatcatcaagattcacaaa 40
>39852_aly-MIR172a:mirbase
Length = 149
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 115 gaatcttgatgatgctgcagcggcaat 141
||||||||||||||||||| |||||||
Sbjct: 100 gaatcttgatgatgctgcatcggcaat 126
>42779_zma-MIR172e:mirbase
Length = 174
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 tgggaatcttgatgatgctgca 133
||||||||||||||||||||||
Sbjct: 133 tgggaatcttgatgatgctgca 154
>42558_sbi-MIR172b:mirbase
Length = 170
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 tgggaatcttgatgatgctgca 133
||||||||||||||||||||||
Sbjct: 148 tgggaatcttgatgatgctgca 169
>41991_osa-MIR172b:mirbase
Length = 238
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 tgggaatcttgatgatgctgca 133
||||||||||||||||||||||
Sbjct: 206 tgggaatcttgatgatgctgca 227
>41768_bdi-MIR172b:mirbase
Length = 254
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 tgggaatcttgatgatgctgca 133
||||||||||||||||||||||
Sbjct: 202 tgggaatcttgatgatgctgca 223
>41767_bdi-MIR172a:mirbase
Length = 153
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 115 gaatcttgatgatgctgcagcggcaa 140
||||||||||||||||||| ||||||
Sbjct: 100 gaatcttgatgatgctgcatcggcaa 125
>41184_aqc-MIR172b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 tgggaatcttgatgatgctgca 133
||||||||||||||||||||||
Sbjct: 84 tgggaatcttgatgatgctgca 105
>41050_ghr-MIR172:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 1 ctgtttgccgatggagcaccatcaagattcacaa 34
|||||||| | ||||||| |||||||||||||||
Sbjct: 6 ctgtttgctgttggagcatcatcaagattcacaa 39
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 110 attgggaatcttgatgatgctgcagcggcaataa 143
|||| ||||| |||||||||||||| ||||||||
Sbjct: 86 attgagaatcctgatgatgctgcagtggcaataa 119
>40067_ath-MIR172e:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 tgggaatcttgatgatgctgca 133
||||||||||||||||||||||
Sbjct: 93 tgggaatcttgatgatgctgca 114
>39856_aly-MIR172e:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 tgggaatcttgatgatgctgca 133
||||||||||||||||||||||
Sbjct: 96 tgggaatcttgatgatgctgca 117
>41125_tcc-MIR172b:mirbase
Length = 160
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 115 gaatcttgatgatgctgcagcggcaataa 143
||||||||||||||||||| |||| ||||
Sbjct: 121 gaatcttgatgatgctgcatcggccataa 149
>41233_csi-MIR172a:mirbase
Length = 162
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 115 gaatcttgatgatgctgcagcggc 138
||||||||||||||||||| ||||
Sbjct: 116 gaatcttgatgatgctgcaacggc 139
>40459_gma-MIR172b:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 2 tgtttgccgatggagcaccatcaagattcaca 33
||||||| |||| |||| ||||||||||||||
Sbjct: 12 tgtttgcggatgtagcatcatcaagattcaca 43
>40063_ath-MIR172a:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 115 gaatcttgatgatgctgcagcggc 138
||||||||||||||||||| ||||
Sbjct: 79 gaatcttgatgatgctgcatcggc 102