miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>31927_mmu-mir-202:mirbase
          Length = 72

 Score =  143 bits (72), Expect = 3e-35
 Identities = 72/72 (100%)
 Strand = Plus / Plus

                                                                      
Query: 15 gttcctttttcctatgcatatacttctttgtggatctggtctaaagaggtatagcgcatg 74
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gttcctttttcctatgcatatacttctttgtggatctggtctaaagaggtatagcgcatg 60

                      
Query: 75 ggaagatggagc 86
          ||||||||||||
Sbjct: 61 ggaagatggagc 72




>31928_mmu-mir-202:mirbase
          Length = 72

 Score =  143 bits (72), Expect = 3e-35
 Identities = 72/72 (100%)
 Strand = Plus / Plus

                                                                      
Query: 15 gttcctttttcctatgcatatacttctttgtggatctggtctaaagaggtatagcgcatg 74
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gttcctttttcctatgcatatacttctttgtggatctggtctaaagaggtatagcgcatg 60

                      
Query: 75 ggaagatggagc 86
          ||||||||||||
Sbjct: 61 ggaagatggagc 72




>32792_rno-mir-202:mirbase
          Length = 72

 Score =  135 bits (68), Expect = 7e-33
 Identities = 71/72 (98%)
 Strand = Plus / Plus

                                                                      
Query: 15 gttcctttttcctatgcatatacttctttgtggatctggtctaaagaggtatagcgcatg 74
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gttcctttttcctatgcatatacttctttgtggatctggtctaaagaggtatagcgcatg 60

                      
Query: 75 ggaagatggagc 86
          |||| |||||||
Sbjct: 61 ggaaaatggagc 72




>28521_hsa-mir-202:mirbase
          Length = 110

 Score =  103 bits (52), Expect = 2e-23
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                      
Query: 15 gttcctttttcctatgcatatacttctttgtggatctggtctaaagaggtatagcgcatg 74
          |||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 20 gttcctttttcctatgcatatacttctttgaggatctggcctaaagaggtatagggcatg 79

              
Query: 75 ggaa 78
          ||||
Sbjct: 80 ggaa 83




>30280_ptr-mir-202:mirbase
          Length = 109

 Score =  103 bits (52), Expect = 2e-23
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                      
Query: 15 gttcctttttcctatgcatatacttctttgtggatctggtctaaagaggtatagcgcatg 74
          |||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 20 gttcctttttcctatgcatatacttctttgaggatctggcctaaagaggtatagggcatg 79

              
Query: 75 ggaa 78
          ||||
Sbjct: 80 ggaa 83




>33281_bta-mir-202:mirbase
          Length = 99

 Score = 95.6 bits (48), Expect = 6e-21
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                      
Query: 12 gctgttcctttttcctatgcatatacttctttgtggatctggtctaaagaggtatagcgc 71
          ||||||||||||||||||||||||||||||||| || ||||| |||||||||| ||| ||
Sbjct: 8  gctgttcctttttcctatgcatatacttctttgagggtctggcctaaagaggtgtagggc 67

                      
Query: 72 atgggaagatgg 83
          ||||||| ||||
Sbjct: 68 atgggaaaatgg 79




>25993_gga-mir-202:mirbase
          Length = 89

 Score = 75.8 bits (38), Expect = 5e-15
 Identities = 62/70 (88%)
 Strand = Plus / Plus

                                                                      
Query: 14 tgttcctttttcctatgcatatacttctttgtggatctggtctaaagaggtatagcgcat 73
          ||||||||||||||||||||||||||||||| |  | || |||||||||| |||| ||||
Sbjct: 7  tgttcctttttcctatgcatatacttctttgagagtttgatctaaagaggcatagagcat 66

                    
Query: 74 gggaagatgg 83
          ||||| ||||
Sbjct: 67 gggaaaatgg 76




>26762_cfa-mir-202:mirbase
          Length = 71

 Score = 71.9 bits (36), Expect = 8e-14
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                      
Query: 15 gttcctttttcctatgcatatacttctttgtggatctggtctaaagaggtatagcgcatg 74
          |||||||||||||||||||||||||||||| || ||||| || ||||||| ||  |||||
Sbjct: 1  gttcctttttcctatgcatatacttctttgagggtctggcctgaagaggtgtaaggcatg 60

              
Query: 75 ggaa 78
          ||||
Sbjct: 61 ggaa 64




>26500_tgu-mir-202-1:mirbase
          Length = 70

 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                      
Query: 19 ctttttcctatgcatatacttctttgtggatctggtctaaagaggtatagcgcatgggaa 78
          |||||||||||||||||||||||||| | ||    ||||||||||||||| |||||||||
Sbjct: 1  ctttttcctatgcatatacttctttgagaattgcttctaaagaggtatagggcatgggaa 60

               
Query: 79 gatgg 83
           ||||
Sbjct: 61 aatgg 65




>26501_tgu-mir-202-2:mirbase
          Length = 70

 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                      
Query: 19 ctttttcctatgcatatacttctttgtggatctggtctaaagaggtatagcgcatgggaa 78
          |||||||||||||||||||||||||| | ||    ||||||||||||||| |||||||||
Sbjct: 1  ctttttcctatgcatatacttctttgagaattgcttctaaagaggtatagggcatgggaa 60

               
Query: 79 gatgg 83
           ||||
Sbjct: 61 aatgg 65




>25822_xtr-mir-202-1:mirbase
          Length = 87

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 12 gctgttcctttttcctatgcatatacttctttg 44
          |||||||||||||||||||||||||| ||||||
Sbjct: 4  gctgttcctttttcctatgcatatacctctttg 36




>25823_xtr-mir-202-2:mirbase
          Length = 87

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 12 gctgttcctttttcctatgcatatacttctttg 44
          |||||||||||||||||||||||||| ||||||
Sbjct: 4  gctgttcctttttcctatgcatatacctctttg 36




>34033_ssc-mir-202:mirbase
          Length = 80

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 50/56 (89%), Gaps = 1/56 (1%)
 Strand = Plus / Plus

                                                                  
Query: 23 ttcctatgcatatacttctttgtggatctggtctaaagaggtatagcgcatgggaa 78
          |||||||||||||||||||||| || ||||| || ||||||| ||| |||||||||
Sbjct: 13 ttcctatgcatatacttctttgagggtctggcctgaagaggtgtag-gcatgggaa 67




>34358_dre-mir-202:mirbase
          Length = 76

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 13 ctgttcctttttcctatgcatatacttctttg 44
          ||||||||||||||||||||||||| ||||||
Sbjct: 1  ctgttcctttttcctatgcatatacctctttg 32




>34630_fru-mir-202:mirbase
          Length = 69

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 17 tcctttttcctatgcatatac 37
          |||||||||||||||||||||
Sbjct: 1  tcctttttcctatgcatatac 21




>34777_tni-mir-202:mirbase
          Length = 69

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 17 tcctttttcctatgcatatac 37
          |||||||||||||||||||||
Sbjct: 1  tcctttttcctatgcatatac 21