miRNEST 2.0, an integrative microRNA resource :: BLAST
>45422_miR398:micropc
Length = 78
Score = 147 bits (74), Expect = 2e-36
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 11 caggagcgacctgaaatcacatgtgggctgcaccctcctgggttatcttgagcaacatgt 70
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 caggagcgacctgaaatcacatgtgggctgcaccctcctgggttatcttgggcaacatgt 60
Query: 71 gttctcaggtcgcccctg 88
||||||||||||||||||
Sbjct: 61 gttctcaggtcgcccctg 78
>46111_miR398:micropc
Length = 76
Score = 143 bits (72), Expect = 3e-35
Identities = 75/76 (98%)
Strand = Plus / Plus
Query: 12 aggagcgacctgaaatcacatgtgggctgcaccctcctgggttatcttgagcaacatgtg 71
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 aggagcgacctgaaatcacatgtgggctgcaccctcctgggttatcttgggcaacatgtg 60
Query: 72 ttctcaggtcgcccct 87
||||||||||||||||
Sbjct: 61 ttctcaggtcgcccct 76
>46116_miR398:micropc
Length = 77
Score = 107 bits (54), Expect = 1e-24
Identities = 73/78 (93%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 11 caggagcgacctgaaatcacatgtgggctgcaccctcctgggttatcttgagcaacatgt 70
||||||||||||| ||| ||||||||||| |||||||||||||| ||||| |||||||||
Sbjct: 1 caggagcgacctggaat-acatgtgggctccaccctcctgggttctcttgggcaacatgt 59
Query: 71 gttctcaggtcgcccctg 88
||||||||||||||||||
Sbjct: 60 gttctcaggtcgcccctg 77
>46303_miR398:micropc
Length = 75
Score = 103 bits (52), Expect = 2e-23
Identities = 71/76 (93%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 12 aggagcgacctgaaatcacatgtgggctgcaccctcctgggttatcttgagcaacatgtg 71
|||||||||||| ||| ||||||||||| |||||||||||||| ||||| ||||||||||
Sbjct: 1 aggagcgacctggaat-acatgtgggctccaccctcctgggttctcttgggcaacatgtg 59
Query: 72 ttctcaggtcgcccct 87
||||||||||||||||
Sbjct: 60 ttctcaggtcgcccct 75
>45519_miR398:micropc
Length = 61
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 11 caggagcgacctgaaatcacatgtgggctgcac 43
|||||||||||||||||||||||||||||||||
Sbjct: 1 caggagcgacctgaaatcacatgtgggctgcac 33
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 62 gcaacatgtgttctcaggtcgcccctg 88
|||||||||||||||||||||||||||
Sbjct: 35 gcaacatgtgttctcaggtcgcccctg 61
>46304_miR398:micropc
Length = 59
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 12 aggagcgacctgaaatcacatgtgggctgcac 43
||||||||||||||||||||||||||||||||
Sbjct: 1 aggagcgacctgaaatcacatgtgggctgcac 32
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 62 gcaacatgtgttctcaggtcgcccct 87
||||||||||||||||||||||||||
Sbjct: 34 gcaacatgtgttctcaggtcgcccct 59
>46550_miR398:micropc
Length = 61
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 caggagcgacctgaaatcacatgtgggctgc 41
|||||||||||||||||||||||||||||||
Sbjct: 1 caggagcgacctgaaatcacatgtgggctgc 31
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 62 gcaacatgtgttctcaggtcgcccctg 88
||||||| |||||||||||||||||||
Sbjct: 35 gcaacatttgttctcaggtcgcccctg 61
>46371_miR398:micropc
Length = 77
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 catgtgttctcaggtcgcccctg 88
|||||||||||||||||||||||
Sbjct: 55 catgtgttctcaggtcgcccctg 77
>46034_miR398:micropc
Length = 77
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 catgtgttctcaggtcgcccctg 88
|||||||||||||||||||||||
Sbjct: 55 catgtgttctcaggtcgcccctg 77
>45294_miR398:micropc
Length = 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 66 catgtgttctcaggtcgcccctg 88
|||||||||||||||||||||||
Sbjct: 76 catgtgttctcaggtcgcccctg 98
>46725_miR398:micropc
Length = 67
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 atgtgttctcaggtcgcccctg 88
||||||||||||||||||||||
Sbjct: 46 atgtgttctcaggtcgcccctg 67
>46690_miR398:micropc
Length = 75
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 catgtgttctcaggtcgcccct 87
||||||||||||||||||||||
Sbjct: 54 catgtgttctcaggtcgcccct 75
>46686_miR398:micropc
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 catgtgttctcaggtcgcccct 87
||||||||||||||||||||||
Sbjct: 75 catgtgttctcaggtcgcccct 96
>46604_miR398:micropc
Length = 67
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 atgtgttctcaggtcgcccctg 88
||||||||||||||||||||||
Sbjct: 46 atgtgttctcaggtcgcccctg 67
>46074_miR398:micropc
Length = 75
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 catgtgttctcaggtcgcccct 87
||||||||||||||||||||||
Sbjct: 54 catgtgttctcaggtcgcccct 75
>44891_miR398:micropc
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 atgtgttctcaggtcgcccctg 88
||||||||||||||||||||||
Sbjct: 68 atgtgttctcaggtcgcccctg 89
>46795_miR398:micropc
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 68 tgtgttctcaggtcgcccctg 88
|||||||||||||||||||||
Sbjct: 81 tgtgttctcaggtcgcccctg 101
>46392_miR398:micropc
Length = 68
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 68 tgtgttctcaggtcgcccctg 88
|||||||||||||||||||||
Sbjct: 48 tgtgttctcaggtcgcccctg 68
>46114_miR398:micropc
Length = 65
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 atgtgttctcaggtcgcccct 87
|||||||||||||||||||||
Sbjct: 45 atgtgttctcaggtcgcccct 65
>45920_miR398:micropc
Length = 104
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 66 catgtgttctcaggtcgcccc 86
|||||||||||||||||||||
Sbjct: 84 catgtgttctcaggtcgcccc 104
>45284_miR398:micropc
Length = 104
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 66 catgtgttctcaggtcgcccc 86
|||||||||||||||||||||
Sbjct: 84 catgtgttctcaggtcgcccc 104
>45192_miR398:micropc
Length = 65
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 atgtgttctcaggtcgcccct 87
|||||||||||||||||||||
Sbjct: 45 atgtgttctcaggtcgcccct 65
>45095_miR398:micropc
Length = 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 atgtgttctcaggtcgcccct 87
|||||||||||||||||||||
Sbjct: 67 atgtgttctcaggtcgcccct 87
>46367_miR398:micropc
Length = 73
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gtgttctcaggtcgcccctg 88
||||||||||||||||||||
Sbjct: 54 gtgttctcaggtcgcccctg 73
>45930_miR398:micropc
Length = 63
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gtgttctcaggtcgcccctg 88
||||||||||||||||||||
Sbjct: 44 gtgttctcaggtcgcccctg 63
>45898_miR398:micropc
Length = 66
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 tgtgttctcaggtcgcccct 87
||||||||||||||||||||
Sbjct: 47 tgtgttctcaggtcgcccct 66
>45694_miR398:micropc
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 tgtgttctcaggtcgcccct 87
||||||||||||||||||||
Sbjct: 80 tgtgttctcaggtcgcccct 99
>45087_miR398:micropc
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 gtgttctcaggtcgcccctg 88
||||||||||||||||||||
Sbjct: 65 gtgttctcaggtcgcccctg 84
